RNA–Protein interactions for RNA: ENST00000267383.5

CDH24-201, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-201ENST00000267383 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
CDH24-201ENST00000267383 RPL37P61927 97 aaKnown RBP9.26□□□□□ -0.93
CDH24-201ENST00000267383 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
CDH24-201ENST00000267383 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
CDH24-201ENST00000267383 RPS29P62273 56 aaKnown RBP9.22□□□□□ -0.93
CDH24-201ENST00000267383 PKHD1L1Q86WI1 4243 aa9.21□□□□□ -0.93
CDH24-201ENST00000267383 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.93
CDH24-201ENST00000267383 RYR3Q15413 4870 aa9.15□□□□□ -0.95
CDH24-201ENST00000267383 NDUFAF8A1L188 74 aa9.13□□□□□ -0.95
CDH24-201ENST00000267383 KRTAP3-3Q9BYR6 98 aa9.13□□□□□ -0.95
CDH24-201ENST00000267383 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
CDH24-201ENST00000267383 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
CDH24-201ENST00000267383 LRP1Q07954 4544 aaKnown RBP9.07□□□□□ -0.96
CDH24-201ENST00000267383 MYCBP2O75592 4640 aa9.07□□□□□ -0.96
CDH24-201ENST00000267383 HSPG2P98160 4391 aa9.07□□□□□ -0.96
CDH24-201ENST00000267383 KRTAP12-2P59991 146 aa9.02□□□□□ -0.97
CDH24-201ENST00000267383 KRTAP10-8P60410 259 aa9.01□□□□□ -0.97
CDH24-201ENST00000267383 S4R3F8 94 aa9.01□□□□□ -0.97
CDH24-201ENST00000267383 FAT3Q8TDW7 4589 aa9□□□□□ -0.97
CDH24-201ENST00000267383 KRTAP15-1Q3LI76 137 aa8.99□□□□□ -0.97
CDH24-201ENST00000267383 TNXBP22105 4242 aa8.89□□□□□ -0.99
CDH24-201ENST00000267383 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
CDH24-201ENST00000267383 RYR1P21817 5038 aa8.85□□□□□ -0.99
CDH24-201ENST00000267383 KRTAP12-1P59990 96 aa8.85□□□□□ -0.99
CDH24-201ENST00000267383 KRTAP17-1Q9BYP8 105 aa8.85□□□□□ -0.99
CDH24-201ENST00000267383 Q5VSD8 79 aa8.84□□□□□ -0.99
CDH24-201ENST00000267383 EPPK1P58107 5090 aaKnown RBP8.83□□□□□ -1
CDH24-201ENST00000267383 LPAP08519 4548 aa8.82□□□□□ -1
CDH24-201ENST00000267383 XP32Q5T750 250 aa8.78□□□□□ -1
CDH24-201ENST00000267383 LRP2P98164 4655 aa8.62□□□□□ -1.03
CDH24-201ENST00000267383 M0QZ58 72 aa8.54□□□□□ -1.04
CDH24-201ENST00000267383 MT1HL1P0DM35 61 aa8.52□□□□□ -1.04
CDH24-201ENST00000267383 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
CDH24-201ENST00000267383 ABCA13Q86UQ4 5058 aa8.47□□□□□ -1.05
CDH24-201ENST00000267383 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
CDH24-201ENST00000267383 R4GN34 69 aa8.43□□□□□ -1.06
CDH24-201ENST00000267383 A0A0A0MQY5 61 aa8.36□□□□□ -1.07
CDH24-201ENST00000267383 LORP23490 312 aaPredicted RBP8.33□□□□□ -1.08
CDH24-201ENST00000267383 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
CDH24-201ENST00000267383 HERC2O95714 4834 aa8.26□□□□□ -1.09
CDH24-201ENST00000267383 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
CDH24-201ENST00000267383 J3QL48 77 aa8.11□□□□□ -1.11
CDH24-201ENST00000267383 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
CDH24-201ENST00000267383 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
CDH24-201ENST00000267383 KRTAP4-1Q9BYQ7 146 aa8.04□□□□□ -1.12
CDH24-201ENST00000267383 PCLOQ9Y6V0 5065 aa8□□□□□ -1.13
CDH24-201ENST00000267383 HERC1Q15751 4861 aa7.97□□□□□ -1.13
CDH24-201ENST00000267383 MUC2Q02817 5179 aa7.97□□□□□ -1.13
CDH24-201ENST00000267383 PP632Q6XCG6 107 aa7.96□□□□□ -1.14
CDH24-201ENST00000267383 SEC61BP60468 96 aaKnown RBP7.89□□□□□ -1.15
CDH24-201ENST00000267383 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
CDH24-201ENST00000267383 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
CDH24-201ENST00000267383 TNP1P09430 55 aa7.73□□□□□ -1.17
CDH24-201ENST00000267383 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
CDH24-201ENST00000267383 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
CDH24-201ENST00000267383 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
CDH24-201ENST00000267383 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
CDH24-201ENST00000267383 RNF213Q63HN8 5207 aa7.55□□□□□ -1.2
CDH24-201ENST00000267383 KRTAP23-1A1A580 65 aa7.44□□□□□ -1.22
CDH24-201ENST00000267383 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
CDH24-201ENST00000267383 LCE2CQ5TA81 110 aa7.34□□□□□ -1.24
CDH24-201ENST00000267383 KRTAP19-1Q8IUB9 90 aa7.26□□□□□ -1.25
CDH24-201ENST00000267383 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
CDH24-201ENST00000267383 M0R2T5 61 aa7.2□□□□□ -1.26
CDH24-201ENST00000267383 SPRR2GQ9BYE4 73 aa7.19□□□□□ -1.26
CDH24-201ENST00000267383 MT1HP80294 61 aa7.17□□□□□ -1.26
CDH24-201ENST00000267383 MT1FP04733 61 aa7.06□□□□□ -1.28
CDH24-201ENST00000267383 KRTAP10-10P60014 251 aa7.06□□□□□ -1.28
CDH24-201ENST00000267383 INE1O15225 51 aa7.02□□□□□ -1.29
CDH24-201ENST00000267383 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
CDH24-201ENST00000267383 MT2AP02795 61 aa7□□□□□ -1.29
CDH24-201ENST00000267383 KRTAP9-8Q9BYQ0 159 aa6.94□□□□□ -1.3
CDH24-201ENST00000267383 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
CDH24-201ENST00000267383 KRTAP10-5P60370 271 aa6.88□□□□□ -1.31
CDH24-201ENST00000267383 MT1XP80297 61 aa6.86□□□□□ -1.31
CDH24-201ENST00000267383 KRTAP10-12P60413 245 aa6.85□□□□□ -1.31
CDH24-201ENST00000267383 MT1BP07438 61 aa6.84□□□□□ -1.31
CDH24-201ENST00000267383 KRTAP19-8Q3LI54 63 aa6.8□□□□□ -1.32
CDH24-201ENST00000267383 KRTAP10-7P60409 375 aaPredicted RBP6.79□□□□□ -1.32
CDH24-201ENST00000267383 KMT2DO14686 5537 aa6.71□□□□□ -1.33
CDH24-201ENST00000267383 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
CDH24-201ENST00000267383 USH2AO75445 5202 aa6.62□□□□□ -1.35
CDH24-201ENST00000267383 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
CDH24-201ENST00000267383 KRTAP19-5Q3LI72 72 aa6.54□□□□□ -1.36
CDH24-201ENST00000267383 LCE3CQ5T5A8 94 aa6.51□□□□□ -1.37
CDH24-201ENST00000267383 LCE2BO14633 110 aa6.49□□□□□ -1.37
CDH24-201ENST00000267383 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
CDH24-201ENST00000267383 KRTAP4-8A0A0G2JLE6 195 aa6.39□□□□□ -1.39
CDH24-201ENST00000267383 KRTAP4-8Q9BYQ9 185 aa6.39□□□□□ -1.39
CDH24-201ENST00000267383 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
CDH24-201ENST00000267383 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
CDH24-201ENST00000267383 KRTAP2-3P0C7H8 128 aa6.2□□□□□ -1.42
CDH24-201ENST00000267383 KRTAP2-4Q9BYR9 128 aa6.2□□□□□ -1.42
CDH24-201ENST00000267383 KRTAP2-1Q9BYU5 128 aa6.2□□□□□ -1.42
CDH24-201ENST00000267383 SSPOA2VEC9 5147 aa6.14□□□□□ -1.43
CDH24-201ENST00000267383 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
CDH24-201ENST00000267383 MT1LQ93083 61 aa5.93□□□□□ -1.46
CDH24-201ENST00000267383 MT1EP04732 61 aa5.88□□□□□ -1.47
CDH24-201ENST00000267383 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
CDH24-201ENST00000267383 KRTAP19-6Q3LI70 58 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms