RNA–Protein interactions for RNA: ENST00000265849.11

PMS2-201, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS2, Length 2,855 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-201ENST00000265849 KRTAP3-3Q9BYR6 98 aa6.22□□□□□ -1.41
PMS2-201ENST00000265849 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
PMS2-201ENST00000265849 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
PMS2-201ENST00000265849 PKHD1P08F94 4074 aa6.15□□□□□ -1.43
PMS2-201ENST00000265849 APOBP04114 4563 aaKnown RBP6.15□□□□□ -1.43
PMS2-201ENST00000265849 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
PMS2-201ENST00000265849 S4R3F8 94 aa6.13□□□□□ -1.43
PMS2-201ENST00000265849 KRTAP12-2P59991 146 aa6.11□□□□□ -1.43
PMS2-201ENST00000265849 FAT1Q14517 4588 aa6.07□□□□□ -1.44
PMS2-201ENST00000265849 DYNC1H1Q14204 4646 aaKnown RBP6.07□□□□□ -1.44
PMS2-201ENST00000265849 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
PMS2-201ENST00000265849 KRTAP12-1P59990 96 aa6.04□□□□□ -1.44
PMS2-201ENST00000265849 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
PMS2-201ENST00000265849 XP32Q5T750 250 aa6.03□□□□□ -1.44
PMS2-201ENST00000265849 KRTAP10-4P60372 401 aaPredicted RBP6.03□□□□□ -1.44
PMS2-201ENST00000265849 LRP1Q07954 4544 aaKnown RBP6.03□□□□□ -1.44
PMS2-201ENST00000265849 FAT3Q8TDW7 4589 aa6.03□□□□□ -1.44
PMS2-201ENST00000265849 HSPG2P98160 4391 aa5.99□□□□□ -1.45
PMS2-201ENST00000265849 DNHD1Q96M86 4753 aa5.97□□□□□ -1.45
PMS2-201ENST00000265849 TNXBP22105 4242 aa5.96□□□□□ -1.46
PMS2-201ENST00000265849 M0QZ58 72 aa5.86□□□□□ -1.47
PMS2-201ENST00000265849 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
PMS2-201ENST00000265849 MYCBP2O75592 4640 aa5.85□□□□□ -1.47
PMS2-201ENST00000265849 J3QL48 77 aa5.83□□□□□ -1.48
PMS2-201ENST00000265849 PLAC4Q8WY50 150 aa5.83□□□□□ -1.48
PMS2-201ENST00000265849 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
PMS2-201ENST00000265849 LPAP08519 4548 aa5.72□□□□□ -1.49
PMS2-201ENST00000265849 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
PMS2-201ENST00000265849 R4GN34 69 aa5.63□□□□□ -1.51
PMS2-201ENST00000265849 LRP2P98164 4655 aa5.61□□□□□ -1.51
PMS2-201ENST00000265849 RYR2Q92736 4967 aa5.61□□□□□ -1.51
PMS2-201ENST00000265849 PRO2289Q9P1D8 64 aa5.57□□□□□ -1.52
PMS2-201ENST00000265849 Q5VSD8 79 aa5.57□□□□□ -1.52
PMS2-201ENST00000265849 LORP23490 312 aaPredicted RBP5.56□□□□□ -1.52
PMS2-201ENST00000265849 PP632Q6XCG6 107 aa5.53□□□□□ -1.52
PMS2-201ENST00000265849 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
PMS2-201ENST00000265849 RYR1P21817 5038 aa5.48□□□□□ -1.53
PMS2-201ENST00000265849 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.53
PMS2-201ENST00000265849 MUC17Q685J3 4493 aa5.4□□□□□ -1.55
PMS2-201ENST00000265849 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
PMS2-201ENST00000265849 KIAA1109Q2LD37 5005 aa5.31□□□□□ -1.56
PMS2-201ENST00000265849 INE1O15225 51 aa5.3□□□□□ -1.56
PMS2-201ENST00000265849 RYR3Q15413 4870 aa5.3□□□□□ -1.56
PMS2-201ENST00000265849 ABCA13Q86UQ4 5058 aa5.28□□□□□ -1.56
PMS2-201ENST00000265849 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
PMS2-201ENST00000265849 KRTAP23-1A1A580 65 aa5.26□□□□□ -1.57
PMS2-201ENST00000265849 KRTAP19-2Q3LHN2 52 aa5.25□□□□□ -1.57
PMS2-201ENST00000265849 TNP1P09430 55 aa5.24□□□□□ -1.57
PMS2-201ENST00000265849 KRTAP21-3Q3LHN1 58 aa5.2□□□□□ -1.58
PMS2-201ENST00000265849 HERC1Q15751 4861 aa5.13□□□□□ -1.59
PMS2-201ENST00000265849 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
PMS2-201ENST00000265849 FLGP20930 4061 aaPredicted RBP5.1□□□□□ -1.59
PMS2-201ENST00000265849 KRTAP4-5Q9BYR2 181 aa5.02□□□□□ -1.61
PMS2-201ENST00000265849 EPPK1P58107 5090 aaKnown RBP5.01□□□□□ -1.61
PMS2-201ENST00000265849 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
PMS2-201ENST00000265849 MUC2Q02817 5179 aa4.94□□□□□ -1.62
PMS2-201ENST00000265849 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
PMS2-201ENST00000265849 SPRR2GQ9BYE4 73 aa4.9□□□□□ -1.62
PMS2-201ENST00000265849 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
PMS2-201ENST00000265849 KRTAP19-1Q8IUB9 90 aa4.87□□□□□ -1.63
PMS2-201ENST00000265849 KRTAP8-1Q8IUC2 63 aa4.84□□□□□ -1.63
PMS2-201ENST00000265849 HERC2O95714 4834 aa4.79□□□□□ -1.64
PMS2-201ENST00000265849 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
PMS2-201ENST00000265849 FAT4Q6V0I7 4981 aa4.73□□□□□ -1.65
PMS2-201ENST00000265849 KRTAP10-12P60413 245 aa4.71□□□□□ -1.66
PMS2-201ENST00000265849 KRTAP12-3P60328 96 aa4.69□□□□□ -1.66
PMS2-201ENST00000265849 HMCN2Q8NDA2 5059 aa4.66□□□□□ -1.66
PMS2-201ENST00000265849 MT1FP04733 61 aa4.64□□□□□ -1.67
PMS2-201ENST00000265849 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
PMS2-201ENST00000265849 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
PMS2-201ENST00000265849 MT1XP80297 61 aa4.63□□□□□ -1.67
PMS2-201ENST00000265849 UBR4Q5T4S7 5183 aa4.63□□□□□ -1.67
PMS2-201ENST00000265849 MT2AP02795 61 aa4.61□□□□□ -1.67
PMS2-201ENST00000265849 LCE2BO14633 110 aa4.59□□□□□ -1.67
PMS2-201ENST00000265849 KRTAP10-10P60014 251 aa4.59□□□□□ -1.68
PMS2-201ENST00000265849 M0R2T5 61 aa4.58□□□□□ -1.68
PMS2-201ENST00000265849 MT1HP80294 61 aa4.58□□□□□ -1.68
PMS2-201ENST00000265849 MT1BP07438 61 aa4.57□□□□□ -1.68
PMS2-201ENST00000265849 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
PMS2-201ENST00000265849 KRTAP9-8Q9BYQ0 159 aa4.54□□□□□ -1.68
PMS2-201ENST00000265849 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
PMS2-201ENST00000265849 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
PMS2-201ENST00000265849 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
PMS2-201ENST00000265849 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
PMS2-201ENST00000265849 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
PMS2-201ENST00000265849 KRTAP2-3P0C7H8 128 aa4.32□□□□□ -1.72
PMS2-201ENST00000265849 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
PMS2-201ENST00000265849 KRTAP2-4Q9BYR9 128 aa4.32□□□□□ -1.72
PMS2-201ENST00000265849 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
PMS2-201ENST00000265849 KMT2DO14686 5537 aa4.19□□□□□ -1.74
PMS2-201ENST00000265849 KRTAP4-8A0A0G2JLE6 195 aa4.16□□□□□ -1.74
PMS2-201ENST00000265849 KRTAP4-8Q9BYQ9 185 aa4.16□□□□□ -1.74
PMS2-201ENST00000265849 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
PMS2-201ENST00000265849 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
PMS2-201ENST00000265849 USH2AO75445 5202 aa4.04□□□□□ -1.76
PMS2-201ENST00000265849 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
PMS2-201ENST00000265849 MT1LQ93083 61 aa4.02□□□□□ -1.77
PMS2-201ENST00000265849 MT1EP04732 61 aa3.96□□□□□ -1.77
PMS2-201ENST00000265849 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
PMS2-201ENST00000265849 LOC100996750A0A140TA64 210 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms