RNA–Protein interactions for RNA: ENST00000265085.9

CPEB4-201, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPEB4, Length 9,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-201ENST00000265085 CSMD2Q7Z408 3487 aa3.32□□□□□ -1.88
CPEB4-201ENST00000265085 ANK2Q01484 3957 aa3.24□□□□□ -1.89
CPEB4-201ENST00000265085 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
CPEB4-201ENST00000265085 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
CPEB4-201ENST00000265085 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
CPEB4-201ENST00000265085 DNAH3Q8TD57 4116 aa3.22□□□□□ -1.89
CPEB4-201ENST00000265085 LORP23490 312 aaPredicted RBP3.19□□□□□ -1.9
CPEB4-201ENST00000265085 KRTAP8-1Q8IUC2 63 aa3.13□□□□□ -1.91
CPEB4-201ENST00000265085 MT3P25713 68 aa3.12□□□□□ -1.91
CPEB4-201ENST00000265085 DNHD1Q96M86 4753 aa3.12□□□□□ -1.91
CPEB4-201ENST00000265085 LCE3CQ5T5A8 94 aa3.11□□□□□ -1.91
CPEB4-201ENST00000265085 ANK3Q12955 4377 aaKnown RBP3.1□□□□□ -1.91
CPEB4-201ENST00000265085 DNAH2Q9P225 4427 aa3.08□□□□□ -1.92
CPEB4-201ENST00000265085 DNAH6Q9C0G6 4158 aa3.06□□□□□ -1.92
CPEB4-201ENST00000265085 CRCT1Q9UGL9 99 aa3.05□□□□□ -1.92
CPEB4-201ENST00000265085 KRTAP12-4P60329 112 aa3.05□□□□□ -1.92
CPEB4-201ENST00000265085 KRTAP17-1Q9BYP8 105 aa3.01□□□□□ -1.93
CPEB4-201ENST00000265085 KMT2AQ03164 3969 aa3□□□□□ -1.93
CPEB4-201ENST00000265085 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
CPEB4-201ENST00000265085 KRTAP10-4P60372 401 aaPredicted RBP2.98□□□□□ -1.93
CPEB4-201ENST00000265085 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
CPEB4-201ENST00000265085 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
CPEB4-201ENST00000265085 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
CPEB4-201ENST00000265085 DNAH1Q9P2D7 4330 aa2.93□□□□□ -1.94
CPEB4-201ENST00000265085 FRAS1Q86XX4 4008 aa2.93□□□□□ -1.94
CPEB4-201ENST00000265085 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
CPEB4-201ENST00000265085 PRKDCP78527 4128 aaKnown RBP2.92□□□□□ -1.94
CPEB4-201ENST00000265085 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
CPEB4-201ENST00000265085 DNAH10Q8IVF4 4471 aa2.89□□□□□ -1.95
CPEB4-201ENST00000265085 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
CPEB4-201ENST00000265085 MT1HL1P0DM35 61 aa2.86□□□□□ -1.95
CPEB4-201ENST00000265085 DNAH17Q9UFH2 4485 aa2.85□□□□□ -1.95
CPEB4-201ENST00000265085 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
CPEB4-201ENST00000265085 HUWE1Q7Z6Z7 4374 aaKnown RBP2.81□□□□□ -1.96
CPEB4-201ENST00000265085 PKHD1P08F94 4074 aa2.8□□□□□ -1.96
CPEB4-201ENST00000265085 DNAH9Q9NYC9 4486 aa2.8□□□□□ -1.96
CPEB4-201ENST00000265085 SACSQ9NZJ4 4579 aa2.78□□□□□ -1.96
CPEB4-201ENST00000265085 DYNC1H1Q14204 4646 aaKnown RBP2.78□□□□□ -1.96
CPEB4-201ENST00000265085 PLECQ15149 4684 aaKnown RBP2.75□□□□□ -1.97
CPEB4-201ENST00000265085 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
CPEB4-201ENST00000265085 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CPEB4-201ENST00000265085 PRM1P04553 51 aa2.72□□□□□ -1.97
CPEB4-201ENST00000265085 DYNC2H1Q8NCM8 4307 aaKnown RBP2.7□□□□□ -1.98
CPEB4-201ENST00000265085 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
CPEB4-201ENST00000265085 KRTAP2-3P0C7H8 128 aa2.69□□□□□ -1.98
CPEB4-201ENST00000265085 KRTAP2-4Q9BYR9 128 aa2.69□□□□□ -1.98
CPEB4-201ENST00000265085 KRTAP2-1Q9BYU5 128 aa2.69□□□□□ -1.98
CPEB4-201ENST00000265085 RYR2Q92736 4967 aa2.69□□□□□ -1.98
CPEB4-201ENST00000265085 VPS13DQ5THJ4 4388 aa2.68□□□□□ -1.98
CPEB4-201ENST00000265085 RYR3Q15413 4870 aa2.68□□□□□ -1.98
CPEB4-201ENST00000265085 HERC2O95714 4834 aa2.68□□□□□ -1.98
CPEB4-201ENST00000265085 DNAH5Q8TE73 4624 aa2.66□□□□□ -1.98
CPEB4-201ENST00000265085 RYR1P21817 5038 aa2.66□□□□□ -1.98
CPEB4-201ENST00000265085 KRTAP10-7P60409 375 aaPredicted RBP2.65□□□□□ -1.98
CPEB4-201ENST00000265085 KIAA1109Q2LD37 5005 aa2.63□□□□□ -1.99
CPEB4-201ENST00000265085 EPPK1P58107 5090 aaKnown RBP2.61□□□□□ -1.99
CPEB4-201ENST00000265085 MT1XP80297 61 aa2.61□□□□□ -1.99
CPEB4-201ENST00000265085 FAT1Q14517 4588 aa2.61□□□□□ -1.99
CPEB4-201ENST00000265085 APOBP04114 4563 aaKnown RBP2.6□□□□□ -1.99
CPEB4-201ENST00000265085 KRTAP4-1Q9BYQ7 146 aa2.59□□□□□ -1.99
CPEB4-201ENST00000265085 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -1.99
CPEB4-201ENST00000265085 MT2AP02795 61 aa2.58□□□□□ -2
CPEB4-201ENST00000265085 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
CPEB4-201ENST00000265085 STARD9Q9P2P6 4700 aa2.56□□□□□ -2
CPEB4-201ENST00000265085 LRP1BQ9NZR2 4599 aa2.56□□□□□ -2
CPEB4-201ENST00000265085 FAT2Q9NYQ8 4349 aa2.55□□□□□ -2
CPEB4-201ENST00000265085 HERC1Q15751 4861 aa2.55□□□□□ -2
CPEB4-201ENST00000265085 LCE2CQ5TA81 110 aa2.53□□□□□ -2
CPEB4-201ENST00000265085 HSPG2P98160 4391 aa2.53□□□□□ -2
CPEB4-201ENST00000265085 MT1GP13640 62 aa2.53□□□□□ -2
CPEB4-201ENST00000265085 MT1FP04733 61 aa2.53□□□□□ -2
CPEB4-201ENST00000265085 KMT2CQ8NEZ4 4911 aaKnown RBP2.52□□□□□ -2.01
CPEB4-201ENST00000265085 PKHD1L1Q86WI1 4243 aa2.51□□□□□ -2.01
CPEB4-201ENST00000265085 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
CPEB4-201ENST00000265085 KRTAP9-2Q9BYQ4 174 aa2.49□□□□□ -2.01
CPEB4-201ENST00000265085 ABCA13Q86UQ4 5058 aa2.49□□□□□ -2.01
CPEB4-201ENST00000265085 MYCBP2O75592 4640 aa2.49□□□□□ -2.01
CPEB4-201ENST00000265085 LRP1Q07954 4544 aaKnown RBP2.48□□□□□ -2.01
CPEB4-201ENST00000265085 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
CPEB4-201ENST00000265085 MT1HP80294 61 aa2.48□□□□□ -2.01
CPEB4-201ENST00000265085 MT1LQ93083 61 aa2.48□□□□□ -2.01
CPEB4-201ENST00000265085 HYDINQ4G0P3 5121 aa2.47□□□□□ -2.01
CPEB4-201ENST00000265085 PKD1P98161 4303 aa2.46□□□□□ -2.02
CPEB4-201ENST00000265085 MT1EP04732 61 aa2.41□□□□□ -2.02
CPEB4-201ENST00000265085 FAT3Q8TDW7 4589 aa2.41□□□□□ -2.02
CPEB4-201ENST00000265085 MT1BP07438 61 aa2.39□□□□□ -2.03
CPEB4-201ENST00000265085 MT1AP04731 61 aa2.39□□□□□ -2.03
CPEB4-201ENST00000265085 LCE2AQ5TA79 106 aaPredicted RBP2.39□□□□□ -2.03
CPEB4-201ENST00000265085 LCE1AQ5T7P2 110 aa2.39□□□□□ -2.03
CPEB4-201ENST00000265085 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
CPEB4-201ENST00000265085 SPRR2AP35326 72 aa2.36□□□□□ -2.03
CPEB4-201ENST00000265085 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
CPEB4-201ENST00000265085 KRTAP2-2Q9BYT5 123 aa2.34□□□□□ -2.03
CPEB4-201ENST00000265085 TNXBP22105 4242 aa2.33□□□□□ -2.04
CPEB4-201ENST00000265085 MUC17Q685J3 4493 aa2.32□□□□□ -2.04
CPEB4-201ENST00000265085 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
CPEB4-201ENST00000265085 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
CPEB4-201ENST00000265085 SPRR2BP35325 72 aa2.31□□□□□ -2.04
CPEB4-201ENST00000265085 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
CPEB4-201ENST00000265085 LCE2BO14633 110 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms