RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 HSPG2P98160 4391 aa10.27□□□□□ -0.77
NEIL3-201ENST00000264596 KRTAP25-1Q3LHN0 102 aa10.24□□□□□ -0.77
NEIL3-201ENST00000264596 RPL37P61927 97 aaKnown RBP10.22□□□□□ -0.77
NEIL3-201ENST00000264596 XP32Q5T750 250 aa10.19□□□□□ -0.78
NEIL3-201ENST00000264596 MYCBP2O75592 4640 aa10.18□□□□□ -0.78
NEIL3-201ENST00000264596 DMBT1Q9UGM3 2413 aaPredicted RBP10.18□□□□□ -0.78
NEIL3-201ENST00000264596 RYR1P21817 5038 aa10.14□□□□□ -0.79
NEIL3-201ENST00000264596 RYR3Q15413 4870 aa10.13□□□□□ -0.79
NEIL3-201ENST00000264596 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
NEIL3-201ENST00000264596 KRTAP17-1Q9BYP8 105 aa10.12□□□□□ -0.79
NEIL3-201ENST00000264596 ROMO1P60602 79 aa10.1□□□□□ -0.79
NEIL3-201ENST00000264596 S4R3F8 94 aa10.05□□□□□ -0.8
NEIL3-201ENST00000264596 KRTAP10-6P60371 365 aaPredicted RBP10.04□□□□□ -0.8
NEIL3-201ENST00000264596 K7ERS5 55 aa10.02□□□□□ -0.81
NEIL3-201ENST00000264596 KIAA1109Q2LD37 5005 aa10.01□□□□□ -0.81
NEIL3-201ENST00000264596 MT1HL1P0DM35 61 aa9.99□□□□□ -0.81
NEIL3-201ENST00000264596 KRTAP13-4Q3LI77 160 aa9.97□□□□□ -0.81
NEIL3-201ENST00000264596 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
NEIL3-201ENST00000264596 A0A0D9SG42 100 aa9.94□□□□□ -0.82
NEIL3-201ENST00000264596 LPAP08519 4548 aa9.91□□□□□ -0.82
NEIL3-201ENST00000264596 CRIPTQ9P021 101 aa9.9□□□□□ -0.83
NEIL3-201ENST00000264596 P0C880 135 aa9.88□□□□□ -0.83
NEIL3-201ENST00000264596 LRP2P98164 4655 aa9.84□□□□□ -0.83
NEIL3-201ENST00000264596 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
NEIL3-201ENST00000264596 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
NEIL3-201ENST00000264596 ABCA13Q86UQ4 5058 aa9.68□□□□□ -0.86
NEIL3-201ENST00000264596 KRTAP12-2P59991 146 aa9.65□□□□□ -0.86
NEIL3-201ENST00000264596 SPINT4Q6UDR6 99 aa9.6□□□□□ -0.87
NEIL3-201ENST00000264596 KRTAP4-5Q9BYR2 181 aa9.6□□□□□ -0.87
NEIL3-201ENST00000264596 KRTAP12-1P59990 96 aa9.56□□□□□ -0.88
NEIL3-201ENST00000264596 C10orf95Q9H7T3 257 aa9.52□□□□□ -0.89
NEIL3-201ENST00000264596 M0QZ58 72 aa9.51□□□□□ -0.89
NEIL3-201ENST00000264596 KRTAP15-1Q3LI76 137 aa9.46□□□□□ -0.89
NEIL3-201ENST00000264596 SEC61BP60468 96 aaKnown RBP9.41□□□□□ -0.9
NEIL3-201ENST00000264596 MUC17Q685J3 4493 aa9.41□□□□□ -0.9
NEIL3-201ENST00000264596 NDUFAF8A1L188 74 aa9.35□□□□□ -0.91
NEIL3-201ENST00000264596 KRTAP4-1Q9BYQ7 146 aa9.34□□□□□ -0.91
NEIL3-201ENST00000264596 R4GN34 69 aa9.34□□□□□ -0.91
NEIL3-201ENST00000264596 J3QL48 77 aa9.31□□□□□ -0.92
NEIL3-201ENST00000264596 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
NEIL3-201ENST00000264596 HERC2O95714 4834 aa9.22□□□□□ -0.93
NEIL3-201ENST00000264596 KRTAP19-2Q3LHN2 52 aa9.12□□□□□ -0.95
NEIL3-201ENST00000264596 MUC2Q02817 5179 aa9.02□□□□□ -0.96
NEIL3-201ENST00000264596 BIRC6Q9NR09 4857 aa8.94□□□□□ -0.98
NEIL3-201ENST00000264596 CAMK2N1Q7Z7J9 78 aa8.88□□□□□ -0.99
NEIL3-201ENST00000264596 FLGP20930 4061 aaPredicted RBP8.86□□□□□ -0.99
NEIL3-201ENST00000264596 PLAC4Q8WY50 150 aa8.8□□□□□ -1
NEIL3-201ENST00000264596 HERC1Q15751 4861 aa8.79□□□□□ -1
NEIL3-201ENST00000264596 PCLOQ9Y6V0 5065 aa8.74□□□□□ -1.01
NEIL3-201ENST00000264596 HMCN2Q8NDA2 5059 aa8.73□□□□□ -1.01
NEIL3-201ENST00000264596 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
NEIL3-201ENST00000264596 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
NEIL3-201ENST00000264596 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
NEIL3-201ENST00000264596 LUZP6Q538Z0 58 aa8.54□□□□□ -1.04
NEIL3-201ENST00000264596 TNP1P09430 55 aa8.51□□□□□ -1.05
NEIL3-201ENST00000264596 A0A0A0MQY5 61 aa8.49□□□□□ -1.05
NEIL3-201ENST00000264596 M0R2T5 61 aa8.46□□□□□ -1.05
NEIL3-201ENST00000264596 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
NEIL3-201ENST00000264596 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.07
NEIL3-201ENST00000264596 RNF213Q63HN8 5207 aa8.38□□□□□ -1.07
NEIL3-201ENST00000264596 MT1HP80294 61 aa8.37□□□□□ -1.07
NEIL3-201ENST00000264596 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
NEIL3-201ENST00000264596 KRTAP23-1A1A580 65 aa8.31□□□□□ -1.08
NEIL3-201ENST00000264596 MT1FP04733 61 aa8.25□□□□□ -1.09
NEIL3-201ENST00000264596 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
NEIL3-201ENST00000264596 MT2AP02795 61 aa8.24□□□□□ -1.09
NEIL3-201ENST00000264596 SPRR5A0A1B0GTR4 108 aa8.21□□□□□ -1.1
NEIL3-201ENST00000264596 KRTAP9-8Q9BYQ0 159 aa8.17□□□□□ -1.1
NEIL3-201ENST00000264596 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
NEIL3-201ENST00000264596 KRTAP19-8Q3LI54 63 aa8.02□□□□□ -1.13
NEIL3-201ENST00000264596 MT1BP07438 61 aa7.97□□□□□ -1.13
NEIL3-201ENST00000264596 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
NEIL3-201ENST00000264596 MT1XP80297 61 aa7.91□□□□□ -1.14
NEIL3-201ENST00000264596 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
NEIL3-201ENST00000264596 KRTAP9-3Q9BYQ3 159 aa7.81□□□□□ -1.16
NEIL3-201ENST00000264596 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
NEIL3-201ENST00000264596 KRTAP10-7P60409 375 aaPredicted RBP7.72□□□□□ -1.17
NEIL3-201ENST00000264596 KRTAP12-3P60328 96 aa7.69□□□□□ -1.18
NEIL3-201ENST00000264596 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
NEIL3-201ENST00000264596 LCE2BO14633 110 aa7.53□□□□□ -1.2
NEIL3-201ENST00000264596 INE1O15225 51 aa7.52□□□□□ -1.2
NEIL3-201ENST00000264596 USH2AO75445 5202 aa7.47□□□□□ -1.21
NEIL3-201ENST00000264596 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
NEIL3-201ENST00000264596 KMT2DO14686 5537 aa7.36□□□□□ -1.23
NEIL3-201ENST00000264596 LCE2AQ5TA79 106 aaPredicted RBP7.34□□□□□ -1.23
NEIL3-201ENST00000264596 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
NEIL3-201ENST00000264596 KRTAP4-8Q9BYQ9 185 aa7.26□□□□□ -1.25
NEIL3-201ENST00000264596 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
NEIL3-201ENST00000264596 KRTAP19-7Q3SYF9 63 aa7.05□□□□□ -1.28
NEIL3-201ENST00000264596 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
NEIL3-201ENST00000264596 KRTAP4-7Q9BYR0 210 aa6.96□□□□□ -1.3
NEIL3-201ENST00000264596 SSPOA2VEC9 5147 aa6.93□□□□□ -1.3
NEIL3-201ENST00000264596 MT1EP04732 61 aa6.84□□□□□ -1.31
NEIL3-201ENST00000264596 MT1LQ93083 61 aa6.84□□□□□ -1.32
NEIL3-201ENST00000264596 FSIP2Q5CZC0 6907 aa6.79□□□□□ -1.32
NEIL3-201ENST00000264596 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
NEIL3-201ENST00000264596 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
NEIL3-201ENST00000264596 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
NEIL3-201ENST00000264596 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
NEIL3-201ENST00000264596 KRTAP2-1Q9BYU5 128 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms