RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 LINC01558Q9Y6Z2 57 aa5.16□□□□□ -1.58
SEC22C-201ENST00000264454 KRTAP3-1Q9BYR8 98 aa5.16□□□□□ -1.58
SEC22C-201ENST00000264454 RBM12B-AS1Q9P1G2 102 aa5.11□□□□□ -1.59
SEC22C-201ENST00000264454 PSPHP1O15172 72 aa5.09□□□□□ -1.59
SEC22C-201ENST00000264454 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
SEC22C-201ENST00000264454 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
SEC22C-201ENST00000264454 LCE2BO14633 110 aa5.06□□□□□ -1.6
SEC22C-201ENST00000264454 Q5VV11 94 aa5.06□□□□□ -1.6
SEC22C-201ENST00000264454 A0A1B0GU69 56 aa5.05□□□□□ -1.6
SEC22C-201ENST00000264454 LPAP08519 4548 aa5.05□□□□□ -1.6
SEC22C-201ENST00000264454 FAT4Q6V0I7 4981 aa5.05□□□□□ -1.6
SEC22C-201ENST00000264454 SEC61GP60059 68 aa5.04□□□□□ -1.6
SEC22C-201ENST00000264454 S4R3F8 94 aa5.04□□□□□ -1.6
SEC22C-201ENST00000264454 LCA10Q71F78 164 aa5□□□□□ -1.61
SEC22C-201ENST00000264454 A6NED7 52 aa4.97□□□□□ -1.61
SEC22C-201ENST00000264454 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
SEC22C-201ENST00000264454 KRTAP4-1Q9BYQ7 146 aa4.96□□□□□ -1.62
SEC22C-201ENST00000264454 MUC2Q02817 5179 aa4.95□□□□□ -1.62
SEC22C-201ENST00000264454 MUC17Q685J3 4493 aa4.95□□□□□ -1.62
SEC22C-201ENST00000264454 UQCR11O14957 56 aa4.94□□□□□ -1.62
SEC22C-201ENST00000264454 LCE2AQ5TA79 106 aaPredicted RBP4.94□□□□□ -1.62
SEC22C-201ENST00000264454 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
SEC22C-201ENST00000264454 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
SEC22C-201ENST00000264454 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
SEC22C-201ENST00000264454 CDC42SE1Q9NRR8 79 aa4.91□□□□□ -1.62
SEC22C-201ENST00000264454 A0A1B0GU33 70 aa4.88□□□□□ -1.63
SEC22C-201ENST00000264454 SPATA8Q6RVD6 105 aa4.88□□□□□ -1.63
SEC22C-201ENST00000264454 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
SEC22C-201ENST00000264454 KRTAP19-2Q3LHN2 52 aa4.87□□□□□ -1.63
SEC22C-201ENST00000264454 H0YAA0 97 aa4.86□□□□□ -1.63
SEC22C-201ENST00000264454 KRTAP10-6P60371 365 aaPredicted RBP4.83□□□□□ -1.64
SEC22C-201ENST00000264454 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
SEC22C-201ENST00000264454 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
SEC22C-201ENST00000264454 A8MU10 97 aa4.78□□□□□ -1.64
SEC22C-201ENST00000264454 P0C880 135 aa4.76□□□□□ -1.65
SEC22C-201ENST00000264454 M0QZ58 72 aa4.74□□□□□ -1.65
SEC22C-201ENST00000264454 PMAIP1Q13794 54 aa4.72□□□□□ -1.65
SEC22C-201ENST00000264454 LCE2CQ5TA81 110 aa4.72□□□□□ -1.65
SEC22C-201ENST00000264454 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
SEC22C-201ENST00000264454 K7ERS5 55 aa4.69□□□□□ -1.66
SEC22C-201ENST00000264454 SVIPQ8NHG7 77 aa4.69□□□□□ -1.66
SEC22C-201ENST00000264454 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
SEC22C-201ENST00000264454 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
SEC22C-201ENST00000264454 A6NN06 94 aa4.66□□□□□ -1.66
SEC22C-201ENST00000264454 R4GN34 69 aa4.65□□□□□ -1.66
SEC22C-201ENST00000264454 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
SEC22C-201ENST00000264454 M0R2T5 61 aa4.63□□□□□ -1.67
SEC22C-201ENST00000264454 MT1HP80294 61 aa4.63□□□□□ -1.67
SEC22C-201ENST00000264454 A0A0D9SG42 100 aa4.62□□□□□ -1.67
SEC22C-201ENST00000264454 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
SEC22C-201ENST00000264454 LORP23490 312 aaPredicted RBP4.57□□□□□ -1.68
SEC22C-201ENST00000264454 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SEC22C-201ENST00000264454 KTN1-AS1Q86SY8 53 aa4.54□□□□□ -1.68
SEC22C-201ENST00000264454 LINC01554Q52M75 96 aa4.53□□□□□ -1.69
SEC22C-201ENST00000264454 SPINT4Q6UDR6 99 aa4.53□□□□□ -1.69
SEC22C-201ENST00000264454 KRTAP12-2P59991 146 aa4.52□□□□□ -1.69
SEC22C-201ENST00000264454 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
SEC22C-201ENST00000264454 MT2AP02795 61 aa4.47□□□□□ -1.69
SEC22C-201ENST00000264454 KRTAP10-10P60014 251 aa4.46□□□□□ -1.7
SEC22C-201ENST00000264454 ROMO1P60602 79 aa4.46□□□□□ -1.7
SEC22C-201ENST00000264454 SPRR2GQ9BYE4 73 aa4.46□□□□□ -1.7
SEC22C-201ENST00000264454 MT1FP04733 61 aa4.43□□□□□ -1.7
SEC22C-201ENST00000264454 KRTAP19-1Q8IUB9 90 aa4.4□□□□□ -1.71
SEC22C-201ENST00000264454 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
SEC22C-201ENST00000264454 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
SEC22C-201ENST00000264454 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
SEC22C-201ENST00000264454 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
SEC22C-201ENST00000264454 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
SEC22C-201ENST00000264454 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
SEC22C-201ENST00000264454 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
SEC22C-201ENST00000264454 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
SEC22C-201ENST00000264454 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
SEC22C-201ENST00000264454 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
SEC22C-201ENST00000264454 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
SEC22C-201ENST00000264454 USH2AO75445 5202 aa4.24□□□□□ -1.73
SEC22C-201ENST00000264454 SYNE2Q8WXH0 6885 aaKnown RBP4.24□□□□□ -1.73
SEC22C-201ENST00000264454 MT1BP07438 61 aa4.23□□□□□ -1.73
SEC22C-201ENST00000264454 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
SEC22C-201ENST00000264454 TNP1P09430 55 aa4.19□□□□□ -1.74
SEC22C-201ENST00000264454 PP632Q6XCG6 107 aa4.15□□□□□ -1.74
SEC22C-201ENST00000264454 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
SEC22C-201ENST00000264454 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
SEC22C-201ENST00000264454 PRO2289Q9P1D8 64 aa4.14□□□□□ -1.75
SEC22C-201ENST00000264454 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
SEC22C-201ENST00000264454 MT1XP80297 61 aa4.11□□□□□ -1.75
SEC22C-201ENST00000264454 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
SEC22C-201ENST00000264454 NEBP20929 6669 aa4.07□□□□□ -1.76
SEC22C-201ENST00000264454 KRTAP19-6Q3LI70 58 aa4□□□□□ -1.77
SEC22C-201ENST00000264454 KRTAP4-8Q9BYQ9 185 aa3.99□□□□□ -1.77
SEC22C-201ENST00000264454 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
SEC22C-201ENST00000264454 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
SEC22C-201ENST00000264454 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
SEC22C-201ENST00000264454 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.78
SEC22C-201ENST00000264454 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
SEC22C-201ENST00000264454 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
SEC22C-201ENST00000264454 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
SEC22C-201ENST00000264454 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
SEC22C-201ENST00000264454 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
SEC22C-201ENST00000264454 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
SEC22C-201ENST00000264454 KRTAP15-1Q3LI76 137 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms