RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 KRTAP12-3P60328 96 aa6.86□□□□□ -1.31
SHANK3-201ENST00000262795 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
SHANK3-201ENST00000262795 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
SHANK3-201ENST00000262795 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.33
SHANK3-201ENST00000262795 KRTAP10-4P60372 401 aaPredicted RBP6.7□□□□□ -1.34
SHANK3-201ENST00000262795 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
SHANK3-201ENST00000262795 ZNF469Q96JG9 3925 aaPredicted RBP6.66□□□□□ -1.34
SHANK3-201ENST00000262795 MT1HP80294 61 aa6.58□□□□□ -1.36
SHANK3-201ENST00000262795 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
SHANK3-201ENST00000262795 DNAH9Q9NYC9 4486 aa6.51□□□□□ -1.37
SHANK3-201ENST00000262795 KRTAP10-7P60409 375 aaPredicted RBP6.5□□□□□ -1.37
SHANK3-201ENST00000262795 DNAH1Q9P2D7 4330 aa6.49□□□□□ -1.37
SHANK3-201ENST00000262795 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
SHANK3-201ENST00000262795 SPRR2EP22531 72 aa6.46□□□□□ -1.38
SHANK3-201ENST00000262795 SPRR2BP35325 72 aa6.46□□□□□ -1.38
SHANK3-201ENST00000262795 SPRR2AP35326 72 aa6.46□□□□□ -1.38
SHANK3-201ENST00000262795 DNAH3Q8TD57 4116 aa6.44□□□□□ -1.38
SHANK3-201ENST00000262795 DNAH2Q9P225 4427 aa6.42□□□□□ -1.38
SHANK3-201ENST00000262795 ANK2Q01484 3957 aa6.4□□□□□ -1.38
SHANK3-201ENST00000262795 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
SHANK3-201ENST00000262795 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
SHANK3-201ENST00000262795 CMYA5Q8N3K9 4069 aa6.32□□□□□ -1.4
SHANK3-201ENST00000262795 MT2AP02795 61 aa6.31□□□□□ -1.4
SHANK3-201ENST00000262795 LYSTQ99698 3801 aa6.23□□□□□ -1.41
SHANK3-201ENST00000262795 MT1FP04733 61 aa6.22□□□□□ -1.41
SHANK3-201ENST00000262795 SPRR2DP22532 72 aa6.22□□□□□ -1.41
SHANK3-201ENST00000262795 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.41
SHANK3-201ENST00000262795 FAT2Q9NYQ8 4349 aa6.2□□□□□ -1.42
SHANK3-201ENST00000262795 DNAH5Q8TE73 4624 aa6.18□□□□□ -1.42
SHANK3-201ENST00000262795 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
SHANK3-201ENST00000262795 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
SHANK3-201ENST00000262795 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
SHANK3-201ENST00000262795 PLECQ15149 4684 aaKnown RBP6.04□□□□□ -1.44
SHANK3-201ENST00000262795 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
SHANK3-201ENST00000262795 LCE2BO14633 110 aa6.02□□□□□ -1.45
SHANK3-201ENST00000262795 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
SHANK3-201ENST00000262795 LCE3BQ5TA77 95 aa6□□□□□ -1.45
SHANK3-201ENST00000262795 DNAH7Q8WXX0 4024 aa5.99□□□□□ -1.45
SHANK3-201ENST00000262795 LRP1BQ9NZR2 4599 aa5.96□□□□□ -1.45
SHANK3-201ENST00000262795 PRKDCP78527 4128 aaKnown RBP5.95□□□□□ -1.46
SHANK3-201ENST00000262795 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
SHANK3-201ENST00000262795 DNAH17Q9UFH2 4485 aa5.94□□□□□ -1.46
SHANK3-201ENST00000262795 STARD9Q9P2P6 4700 aa5.92□□□□□ -1.46
SHANK3-201ENST00000262795 HECTD4Q9Y4D8 3996 aa5.89□□□□□ -1.47
SHANK3-201ENST00000262795 LCE3CQ5T5A8 94 aa5.88□□□□□ -1.47
SHANK3-201ENST00000262795 DYNC2H1Q8NCM8 4307 aaKnown RBP5.87□□□□□ -1.47
SHANK3-201ENST00000262795 VPS13DQ5THJ4 4388 aa5.85□□□□□ -1.47
SHANK3-201ENST00000262795 MT1GP13640 62 aa5.85□□□□□ -1.47
SHANK3-201ENST00000262795 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
SHANK3-201ENST00000262795 KRTAP19-1Q8IUB9 90 aa5.81□□□□□ -1.48
SHANK3-201ENST00000262795 FAT1Q14517 4588 aa5.81□□□□□ -1.48
SHANK3-201ENST00000262795 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
SHANK3-201ENST00000262795 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
SHANK3-201ENST00000262795 DNHD1Q96M86 4753 aa5.77□□□□□ -1.49
SHANK3-201ENST00000262795 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
SHANK3-201ENST00000262795 MT4P47944 62 aa5.72□□□□□ -1.49
SHANK3-201ENST00000262795 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.5
SHANK3-201ENST00000262795 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
SHANK3-201ENST00000262795 KRTAP4-8A0A0G2JLE6 195 aa5.68□□□□□ -1.5
SHANK3-201ENST00000262795 KRTAP4-8Q9BYQ9 185 aa5.68□□□□□ -1.5
SHANK3-201ENST00000262795 RYR1P21817 5038 aa5.63□□□□□ -1.51
SHANK3-201ENST00000262795 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
SHANK3-201ENST00000262795 APOBP04114 4563 aaKnown RBP5.57□□□□□ -1.52
SHANK3-201ENST00000262795 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
SHANK3-201ENST00000262795 LPAP08519 4548 aa5.52□□□□□ -1.53
SHANK3-201ENST00000262795 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
SHANK3-201ENST00000262795 MT1XP80297 61 aa5.49□□□□□ -1.53
SHANK3-201ENST00000262795 HSPG2P98160 4391 aa5.45□□□□□ -1.54
SHANK3-201ENST00000262795 PKD1P98161 4303 aa5.43□□□□□ -1.54
SHANK3-201ENST00000262795 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
SHANK3-201ENST00000262795 PKHD1P08F94 4074 aa5.41□□□□□ -1.54
SHANK3-201ENST00000262795 KRTAP9-6A0A140TA67 174 aa5.39□□□□□ -1.55
SHANK3-201ENST00000262795 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
SHANK3-201ENST00000262795 MT1BP07438 61 aa5.38□□□□□ -1.55
SHANK3-201ENST00000262795 RYR3Q15413 4870 aa5.35□□□□□ -1.55
SHANK3-201ENST00000262795 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
SHANK3-201ENST00000262795 KRTAP9-3Q9BYQ3 159 aa5.32□□□□□ -1.56
SHANK3-201ENST00000262795 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
SHANK3-201ENST00000262795 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
SHANK3-201ENST00000262795 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
SHANK3-201ENST00000262795 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
SHANK3-201ENST00000262795 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
SHANK3-201ENST00000262795 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
SHANK3-201ENST00000262795 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.57
SHANK3-201ENST00000262795 TNXBP22105 4242 aa5.2□□□□□ -1.58
SHANK3-201ENST00000262795 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
SHANK3-201ENST00000262795 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
SHANK3-201ENST00000262795 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
SHANK3-201ENST00000262795 LOC100996750A0A140TA64 210 aa5.11□□□□□ -1.59
SHANK3-201ENST00000262795 KRTAP19-4Q3LI73 84 aa5.11□□□□□ -1.59
SHANK3-201ENST00000262795 HYDINQ4G0P3 5121 aa5.08□□□□□ -1.6
SHANK3-201ENST00000262795 PRM1P04553 51 aa5.07□□□□□ -1.6
SHANK3-201ENST00000262795 KRTAP9-7A8MTY7 169 aa5.07□□□□□ -1.6
SHANK3-201ENST00000262795 LCE5AQ5TCM9 118 aa5.07□□□□□ -1.6
SHANK3-201ENST00000262795 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
SHANK3-201ENST00000262795 KIAA1109Q2LD37 5005 aa5.02□□□□□ -1.61
SHANK3-201ENST00000262795 MT1LQ93083 61 aa4.99□□□□□ -1.61
SHANK3-201ENST00000262795 MT1EP04732 61 aa4.97□□□□□ -1.61
SHANK3-201ENST00000262795 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.61
SHANK3-201ENST00000262795 MT3P25713 68 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms