RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
VHL-201ENST00000256474 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
VHL-201ENST00000256474 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
VHL-201ENST00000256474 Q5VSD8 79 aa7.08□□□□□ -1.28
VHL-201ENST00000256474 KRTAP10-4P60372 401 aaPredicted RBP7.07□□□□□ -1.28
VHL-201ENST00000256474 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
VHL-201ENST00000256474 NDUFAF8A1L188 74 aa7□□□□□ -1.29
VHL-201ENST00000256474 RYR2Q92736 4967 aa6.98□□□□□ -1.29
VHL-201ENST00000256474 RYR1P21817 5038 aa6.97□□□□□ -1.29
VHL-201ENST00000256474 RYR3Q15413 4870 aa6.97□□□□□ -1.29
VHL-201ENST00000256474 ROMO1P60602 79 aa6.97□□□□□ -1.29
VHL-201ENST00000256474 S4R3F8 94 aa6.97□□□□□ -1.29
VHL-201ENST00000256474 TNXBP22105 4242 aa6.95□□□□□ -1.3
VHL-201ENST00000256474 XP32Q5T750 250 aa6.94□□□□□ -1.3
VHL-201ENST00000256474 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
VHL-201ENST00000256474 P0C880 135 aa6.92□□□□□ -1.3
VHL-201ENST00000256474 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
VHL-201ENST00000256474 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
VHL-201ENST00000256474 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
VHL-201ENST00000256474 KIAA1109Q2LD37 5005 aa6.91□□□□□ -1.3
VHL-201ENST00000256474 LRP2P98164 4655 aa6.9□□□□□ -1.3
VHL-201ENST00000256474 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
VHL-201ENST00000256474 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
VHL-201ENST00000256474 KRTAP10-6P60371 365 aaPredicted RBP6.86□□□□□ -1.31
VHL-201ENST00000256474 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
VHL-201ENST00000256474 KRTAP3-2Q9BYR7 98 aa6.77□□□□□ -1.33
VHL-201ENST00000256474 EPPK1P58107 5090 aaKnown RBP6.75□□□□□ -1.33
VHL-201ENST00000256474 MUC2Q02817 5179 aa6.73□□□□□ -1.33
VHL-201ENST00000256474 KRTAP12-2P59991 146 aa6.72□□□□□ -1.33
VHL-201ENST00000256474 MT1HL1P0DM35 61 aa6.69□□□□□ -1.34
VHL-201ENST00000256474 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
VHL-201ENST00000256474 A0A0A0MQY5 61 aa6.67□□□□□ -1.34
VHL-201ENST00000256474 M0QZ58 72 aa6.64□□□□□ -1.35
VHL-201ENST00000256474 J3QL48 77 aa6.61□□□□□ -1.35
VHL-201ENST00000256474 KRTAP4-5Q9BYR2 181 aa6.6□□□□□ -1.35
VHL-201ENST00000256474 R4GN34 69 aa6.6□□□□□ -1.35
VHL-201ENST00000256474 KRTAP12-1P59990 96 aa6.59□□□□□ -1.36
VHL-201ENST00000256474 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
VHL-201ENST00000256474 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
VHL-201ENST00000256474 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
VHL-201ENST00000256474 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
VHL-201ENST00000256474 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
VHL-201ENST00000256474 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
VHL-201ENST00000256474 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
VHL-201ENST00000256474 HERC2O95714 4834 aa6.29□□□□□ -1.4
VHL-201ENST00000256474 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
VHL-201ENST00000256474 HERC1Q15751 4861 aa6.25□□□□□ -1.41
VHL-201ENST00000256474 M0R2T5 61 aa6.24□□□□□ -1.41
VHL-201ENST00000256474 KRTAP15-1Q3LI76 137 aa6.24□□□□□ -1.41
VHL-201ENST00000256474 RNF213Q63HN8 5207 aa6.19□□□□□ -1.42
VHL-201ENST00000256474 BIRC6Q9NR09 4857 aa6.18□□□□□ -1.42
VHL-201ENST00000256474 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
VHL-201ENST00000256474 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
VHL-201ENST00000256474 FLGP20930 4061 aaPredicted RBP5.96□□□□□ -1.46
VHL-201ENST00000256474 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
VHL-201ENST00000256474 KRTAP19-2Q3LHN2 52 aa5.95□□□□□ -1.46
VHL-201ENST00000256474 TNP1P09430 55 aa5.94□□□□□ -1.46
VHL-201ENST00000256474 PP632Q6XCG6 107 aa5.86□□□□□ -1.47
VHL-201ENST00000256474 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
VHL-201ENST00000256474 LCE2CQ5TA81 110 aa5.68□□□□□ -1.5
VHL-201ENST00000256474 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.51
VHL-201ENST00000256474 USH2AO75445 5202 aa5.64□□□□□ -1.51
VHL-201ENST00000256474 LCE3AQ5TA76 89 aa5.63□□□□□ -1.51
VHL-201ENST00000256474 MT1HP80294 61 aa5.62□□□□□ -1.51
VHL-201ENST00000256474 MT1FP04733 61 aa5.61□□□□□ -1.51
VHL-201ENST00000256474 KMT2DO14686 5537 aa5.58□□□□□ -1.52
VHL-201ENST00000256474 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
VHL-201ENST00000256474 MT2AP02795 61 aa5.56□□□□□ -1.52
VHL-201ENST00000256474 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
VHL-201ENST00000256474 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
VHL-201ENST00000256474 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
VHL-201ENST00000256474 MT1BP07438 61 aa5.34□□□□□ -1.55
VHL-201ENST00000256474 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
VHL-201ENST00000256474 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
VHL-201ENST00000256474 MT1XP80297 61 aa5.33□□□□□ -1.56
VHL-201ENST00000256474 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
VHL-201ENST00000256474 SPRR5A0A1B0GTR4 108 aa5.32□□□□□ -1.56
VHL-201ENST00000256474 FSIP2Q5CZC0 6907 aa5.31□□□□□ -1.56
VHL-201ENST00000256474 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
VHL-201ENST00000256474 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
VHL-201ENST00000256474 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
VHL-201ENST00000256474 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
VHL-201ENST00000256474 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
VHL-201ENST00000256474 KRTAP4-8A0A0G2JLE6 195 aa5.11□□□□□ -1.59
VHL-201ENST00000256474 KRTAP4-8Q9BYQ9 185 aa5.11□□□□□ -1.59
VHL-201ENST00000256474 KRTAP19-5Q3LI72 72 aa5.11□□□□□ -1.59
VHL-201ENST00000256474 LCE2BO14633 110 aa5.08□□□□□ -1.6
VHL-201ENST00000256474 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
VHL-201ENST00000256474 LCE2DQ5TA82 110 aaPredicted RBP5.01□□□□□ -1.61
VHL-201ENST00000256474 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.61
VHL-201ENST00000256474 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
VHL-201ENST00000256474 INE1O15225 51 aa4.93□□□□□ -1.62
VHL-201ENST00000256474 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
VHL-201ENST00000256474 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
VHL-201ENST00000256474 DSTQ03001 7570 aaKnown RBP4.86□□□□□ -1.63
VHL-201ENST00000256474 MUC12Q9UKN1 5478 aa4.8□□□□□ -1.64
VHL-201ENST00000256474 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
VHL-201ENST00000256474 SSPOA2VEC9 5147 aa4.79□□□□□ -1.64
VHL-201ENST00000256474 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
VHL-201ENST00000256474 KRTAP19-7Q3SYF9 63 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms