RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 M0R2T5 61 aa12.66□□□□□ -0.38
TOMM40-201ENST00000252487 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
TOMM40-201ENST00000252487 LCE2AQ5TA79 106 aaPredicted RBP12.63□□□□□ -0.39
TOMM40-201ENST00000252487 ATP5EP56381 51 aaPredicted RBP12.59□□□□□ -0.39
TOMM40-201ENST00000252487 COA5Q86WW8 74 aa12.59□□□□□ -0.39
TOMM40-201ENST00000252487 CHKB-CPT1BH3BT56 60 aa12.54□□□□□ -0.4
TOMM40-201ENST00000252487 CSAG1Q6PB30 78 aa12.48□□□□□ -0.41
TOMM40-201ENST00000252487 KRTAP10-6P60371 365 aaPredicted RBP12.42□□□□□ -0.42
TOMM40-201ENST00000252487 LORP23490 312 aaPredicted RBP12.34□□□□□ -0.43
TOMM40-201ENST00000252487 SPTSSBQ8NFR3 76 aa12.31□□□□□ -0.44
TOMM40-201ENST00000252487 SERP1Q9Y6X1 66 aa12.3□□□□□ -0.44
TOMM40-201ENST00000252487 KRTAP9-8Q9BYQ0 159 aa12.27□□□□□ -0.45
TOMM40-201ENST00000252487 MT2AP02795 61 aa12.22□□□□□ -0.45
TOMM40-201ENST00000252487 MT1FP04733 61 aa12.15□□□□□ -0.46
TOMM40-201ENST00000252487 ADM2Q7Z4H4 148 aa12.15□□□□□ -0.46
TOMM40-201ENST00000252487 H0YAA0 97 aa12.09□□□□□ -0.47
TOMM40-201ENST00000252487 KRTAP10-10P60014 251 aa12.08□□□□□ -0.47
TOMM40-201ENST00000252487 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.47
TOMM40-201ENST00000252487 P0C880 135 aa12.05□□□□□ -0.48
TOMM40-201ENST00000252487 RPS28P62857 69 aaKnown RBP12□□□□□ -0.49
TOMM40-201ENST00000252487 LINC01558Q9Y6Z2 57 aa11.9□□□□□ -0.5
TOMM40-201ENST00000252487 SMIM26A0A096LP01 95 aa11.89□□□□□ -0.51
TOMM40-201ENST00000252487 SEC61GP60059 68 aa11.89□□□□□ -0.51
TOMM40-201ENST00000252487 A0A1B0GU69 56 aa11.89□□□□□ -0.51
TOMM40-201ENST00000252487 KRTAP9-3Q9BYQ3 159 aa11.85□□□□□ -0.51
TOMM40-201ENST00000252487 Q1T7F1 81 aa11.77□□□□□ -0.52
TOMM40-201ENST00000252487 PRR15LQ9BU68 103 aa11.77□□□□□ -0.53
TOMM40-201ENST00000252487 KRTAP19-1Q8IUB9 90 aa11.74□□□□□ -0.53
TOMM40-201ENST00000252487 CRIPTQ9P021 101 aa11.72□□□□□ -0.53
TOMM40-201ENST00000252487 R4GN34 69 aa11.72□□□□□ -0.53
TOMM40-201ENST00000252487 V9GYY9 64 aa11.72□□□□□ -0.53
TOMM40-201ENST00000252487 M0QZ58 72 aa11.71□□□□□ -0.54
TOMM40-201ENST00000252487 PSPHP1O15172 72 aa11.71□□□□□ -0.54
TOMM40-201ENST00000252487 KRTAP13-4Q3LI77 160 aa11.67□□□□□ -0.54
TOMM40-201ENST00000252487 SPRR2GQ9BYE4 73 aa11.67□□□□□ -0.54
TOMM40-201ENST00000252487 A0A1B0GU33 70 aa11.66□□□□□ -0.54
TOMM40-201ENST00000252487 LCE2BO14633 110 aa11.63□□□□□ -0.55
TOMM40-201ENST00000252487 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
TOMM40-201ENST00000252487 SPATA8Q6RVD6 105 aa11.59□□□□□ -0.55
TOMM40-201ENST00000252487 LINC01554Q52M75 96 aa11.56□□□□□ -0.56
TOMM40-201ENST00000252487 Q5VV11 94 aa11.56□□□□□ -0.56
TOMM40-201ENST00000252487 KRTAP9-2Q9BYQ4 174 aa11.46□□□□□ -0.57
TOMM40-201ENST00000252487 USH2AO75445 5202 aa11.46□□□□□ -0.58
TOMM40-201ENST00000252487 KRTAP19-8Q3LI54 63 aa11.44□□□□□ -0.58
TOMM40-201ENST00000252487 A0A0D9SG42 100 aa11.42□□□□□ -0.58
TOMM40-201ENST00000252487 UQCR11O14957 56 aa11.4□□□□□ -0.58
TOMM40-201ENST00000252487 MT1BP07438 61 aa11.38□□□□□ -0.59
TOMM40-201ENST00000252487 A8MU10 97 aa11.38□□□□□ -0.59
TOMM40-201ENST00000252487 FSIP2Q5CZC0 6907 aa11.33□□□□□ -0.6
TOMM40-201ENST00000252487 A6NED7 52 aa11.3□□□□□ -0.6
TOMM40-201ENST00000252487 MIR22HGQ0VDD5 57 aa11.27□□□□□ -0.61
TOMM40-201ENST00000252487 SSPOA2VEC9 5147 aa11.18□□□□□ -0.62
TOMM40-201ENST00000252487 PLAC4Q8WY50 150 aa11.18□□□□□ -0.62
TOMM40-201ENST00000252487 A6NN06 94 aa11.17□□□□□ -0.62
TOMM40-201ENST00000252487 KRTAP12-1P59990 96 aa11.15□□□□□ -0.63
TOMM40-201ENST00000252487 SPINT4Q6UDR6 99 aa11.15□□□□□ -0.63
TOMM40-201ENST00000252487 KRTAP12-2P59991 146 aa11.13□□□□□ -0.63
TOMM40-201ENST00000252487 CDC42SE1Q9NRR8 79 aa10.98□□□□□ -0.65
TOMM40-201ENST00000252487 CRCT1Q9UGL9 99 aa10.97□□□□□ -0.65
TOMM40-201ENST00000252487 KRTAP19-6Q3LI70 58 aa10.95□□□□□ -0.66
TOMM40-201ENST00000252487 CAMK2N1Q7Z7J9 78 aa10.92□□□□□ -0.66
TOMM40-201ENST00000252487 MT1XP80297 61 aa10.92□□□□□ -0.66
TOMM40-201ENST00000252487 KRTAP10-5P60370 271 aa10.88□□□□□ -0.67
TOMM40-201ENST00000252487 BRK1Q8WUW1 75 aa10.85□□□□□ -0.67
TOMM40-201ENST00000252487 K7ERS5 55 aa10.78□□□□□ -0.68
TOMM40-201ENST00000252487 FCGBPQ9Y6R7 5405 aaPredicted RBP10.78□□□□□ -0.68
TOMM40-201ENST00000252487 PRO2289Q9P1D8 64 aa10.75□□□□□ -0.69
TOMM40-201ENST00000252487 KRTAP9-6A0A140TA67 174 aa10.73□□□□□ -0.69
TOMM40-201ENST00000252487 C10orf95Q9H7T3 257 aa10.6□□□□□ -0.71
TOMM40-201ENST00000252487 KRTAP10-7P60409 375 aaPredicted RBP10.48□□□□□ -0.73
TOMM40-201ENST00000252487 MACF1Q9UPN3 7388 aaKnown RBP10.34□□□□□ -0.75
TOMM40-201ENST00000252487 KRTAP10-12P60413 245 aa10.31□□□□□ -0.76
TOMM40-201ENST00000252487 ROMO1P60602 79 aa10.31□□□□□ -0.76
TOMM40-201ENST00000252487 PRO0628Q9UI54 55 aa10.29□□□□□ -0.76
TOMM40-201ENST00000252487 TNP1P09430 55 aa10.28□□□□□ -0.76
TOMM40-201ENST00000252487 KMT2DO14686 5537 aa10.28□□□□□ -0.76
TOMM40-201ENST00000252487 KRTAP4-8A0A0G2JLE6 195 aa10.21□□□□□ -0.78
TOMM40-201ENST00000252487 KRTAP4-8Q9BYQ9 185 aa10.21□□□□□ -0.78
TOMM40-201ENST00000252487 PMAIP1Q13794 54 aa10.2□□□□□ -0.78
TOMM40-201ENST00000252487 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.19□□□□□ -0.78
TOMM40-201ENST00000252487 KRTAP25-1Q3LHN0 102 aa10.14□□□□□ -0.79
TOMM40-201ENST00000252487 SYNE2Q8WXH0 6885 aaKnown RBP10.1□□□□□ -0.79
TOMM40-201ENST00000252487 LCE3AQ5TA76 89 aa10.03□□□□□ -0.8
TOMM40-201ENST00000252487 KRTAP8-1Q8IUC2 63 aa9.98□□□□□ -0.81
TOMM40-201ENST00000252487 KRTAP19-5Q3LI72 72 aa9.77□□□□□ -0.85
TOMM40-201ENST00000252487 KRTAP9-7A8MTY7 169 aa9.76□□□□□ -0.85
TOMM40-201ENST00000252487 KRTAP6-3Q3LI67 103 aa9.76□□□□□ -0.85
TOMM40-201ENST00000252487 SPRR2FQ96RM1 72 aa9.75□□□□□ -0.85
TOMM40-201ENST00000252487 KRTAP19-7Q3SYF9 63 aa9.73□□□□□ -0.85
TOMM40-201ENST00000252487 KRTAP23-1A1A580 65 aa9.72□□□□□ -0.85
TOMM40-201ENST00000252487 KRTAP5-9P26371 169 aa9.72□□□□□ -0.85
TOMM40-201ENST00000252487 PRAC1Q96KF2 57 aa9.72□□□□□ -0.85
TOMM40-201ENST00000252487 PP632Q6XCG6 107 aa9.64□□□□□ -0.87
TOMM40-201ENST00000252487 MUC12Q9UKN1 5478 aa9.64□□□□□ -0.87
TOMM40-201ENST00000252487 SVIPQ8NHG7 77 aa9.63□□□□□ -0.87
TOMM40-201ENST00000252487 KTN1-AS1Q86SY8 53 aa9.61□□□□□ -0.87
TOMM40-201ENST00000252487 MT1EP04732 61 aa9.59□□□□□ -0.87
TOMM40-201ENST00000252487 KRTAP12-3P60328 96 aa9.59□□□□□ -0.87
TOMM40-201ENST00000252487 MDN1Q9NU22 5596 aa9.47□□□□□ -0.89
TOMM40-201ENST00000252487 SPRR2EP22531 72 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms