RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 KTN1-AS1Q86SY8 53 aa10.23□□□□□ -0.77
KRT1-201ENST00000252244 EPPK1P58107 5090 aaKnown RBP10.23□□□□□ -0.77
KRT1-201ENST00000252244 H0YAA0 97 aa10.05□□□□□ -0.8
KRT1-201ENST00000252244 A0A1B0GU33 70 aa10.05□□□□□ -0.8
KRT1-201ENST00000252244 LPAP08519 4548 aa10.01□□□□□ -0.81
KRT1-201ENST00000252244 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
KRT1-201ENST00000252244 LRP2P98164 4655 aa10.01□□□□□ -0.81
KRT1-201ENST00000252244 KRTAP3-3Q9BYR6 98 aa9.99□□□□□ -0.81
KRT1-201ENST00000252244 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
KRT1-201ENST00000252244 ABCA13Q86UQ4 5058 aa9.95□□□□□ -0.82
KRT1-201ENST00000252244 ADM2Q7Z4H4 148 aa9.93□□□□□ -0.82
KRT1-201ENST00000252244 S4R3F8 94 aa9.93□□□□□ -0.82
KRT1-201ENST00000252244 TPRXLQ17RH7 258 aa9.92□□□□□ -0.82
KRT1-201ENST00000252244 PRAC1Q96KF2 57 aa9.91□□□□□ -0.82
KRT1-201ENST00000252244 RBM12B-AS1Q9P1G2 102 aa9.91□□□□□ -0.82
KRT1-201ENST00000252244 KRTAP10-6P60371 365 aaPredicted RBP9.84□□□□□ -0.83
KRT1-201ENST00000252244 KRTAP3-2Q9BYR7 98 aa9.79□□□□□ -0.84
KRT1-201ENST00000252244 KRTAP13-4Q3LI77 160 aa9.73□□□□□ -0.85
KRT1-201ENST00000252244 P0C880 135 aa9.71□□□□□ -0.86
KRT1-201ENST00000252244 HERC2O95714 4834 aa9.64□□□□□ -0.87
KRT1-201ENST00000252244 A0A0D9SG42 100 aa9.64□□□□□ -0.87
KRT1-201ENST00000252244 CSAG1Q6PB30 78 aa9.63□□□□□ -0.87
KRT1-201ENST00000252244 K7ERS5 55 aa9.62□□□□□ -0.87
KRT1-201ENST00000252244 J3QL48 77 aa9.62□□□□□ -0.87
KRT1-201ENST00000252244 MUC17Q685J3 4493 aa9.57□□□□□ -0.88
KRT1-201ENST00000252244 SEC61BP60468 96 aaKnown RBP9.56□□□□□ -0.88
KRT1-201ENST00000252244 KRTAP4-1Q9BYQ7 146 aa9.49□□□□□ -0.89
KRT1-201ENST00000252244 LINC01554Q52M75 96 aa9.44□□□□□ -0.9
KRT1-201ENST00000252244 BIRC6Q9NR09 4857 aa9.42□□□□□ -0.9
KRT1-201ENST00000252244 CRIPTQ9P021 101 aa9.4□□□□□ -0.91
KRT1-201ENST00000252244 ROMO1P60602 79 aa9.39□□□□□ -0.91
KRT1-201ENST00000252244 KRTAP25-1Q3LHN0 102 aa9.39□□□□□ -0.91
KRT1-201ENST00000252244 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
KRT1-201ENST00000252244 M0QZ58 72 aa9.33□□□□□ -0.92
KRT1-201ENST00000252244 KRTAP12-1P59990 96 aa9.32□□□□□ -0.92
KRT1-201ENST00000252244 SPINT4Q6UDR6 99 aa9.32□□□□□ -0.92
KRT1-201ENST00000252244 MUC2Q02817 5179 aa9.29□□□□□ -0.92
KRT1-201ENST00000252244 KRTAP19-2Q3LHN2 52 aa9.26□□□□□ -0.93
KRT1-201ENST00000252244 HERC1Q15751 4861 aa9.22□□□□□ -0.93
KRT1-201ENST00000252244 R4GN34 69 aa9.21□□□□□ -0.94
KRT1-201ENST00000252244 PCLOQ9Y6V0 5065 aa9.18□□□□□ -0.94
KRT1-201ENST00000252244 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
KRT1-201ENST00000252244 C10orf95Q9H7T3 257 aa9.1□□□□□ -0.95
KRT1-201ENST00000252244 HMCN2Q8NDA2 5059 aa9.1□□□□□ -0.95
KRT1-201ENST00000252244 FLGP20930 4061 aaPredicted RBP9.1□□□□□ -0.95
KRT1-201ENST00000252244 FAT4Q6V0I7 4981 aa8.84□□□□□ -0.99
KRT1-201ENST00000252244 LCE2CQ5TA81 110 aa8.8□□□□□ -1
KRT1-201ENST00000252244 RNF213Q63HN8 5207 aa8.73□□□□□ -1.01
KRT1-201ENST00000252244 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
KRT1-201ENST00000252244 CAMK2N1Q7Z7J9 78 aa8.71□□□□□ -1.01
KRT1-201ENST00000252244 M0R2T5 61 aa8.61□□□□□ -1.03
KRT1-201ENST00000252244 MT1HP80294 61 aa8.58□□□□□ -1.04
KRT1-201ENST00000252244 H3BS24 57 aa8.53□□□□□ -1.04
KRT1-201ENST00000252244 KRTAP15-1Q3LI76 137 aa8.49□□□□□ -1.05
KRT1-201ENST00000252244 SPRR2GQ9BYE4 73 aa8.47□□□□□ -1.05
KRT1-201ENST00000252244 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
KRT1-201ENST00000252244 MT1FP04733 61 aa8.4□□□□□ -1.07
KRT1-201ENST00000252244 MT2AP02795 61 aa8.39□□□□□ -1.07
KRT1-201ENST00000252244 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
KRT1-201ENST00000252244 PP632Q6XCG6 107 aa8.36□□□□□ -1.07
KRT1-201ENST00000252244 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
KRT1-201ENST00000252244 KRTAP9-8Q9BYQ0 159 aa8.35□□□□□ -1.07
KRT1-201ENST00000252244 TNP1P09430 55 aa8.34□□□□□ -1.08
KRT1-201ENST00000252244 NDUFAF8A1L188 74 aa8.21□□□□□ -1.1
KRT1-201ENST00000252244 KRTAP23-1A1A580 65 aa8.13□□□□□ -1.11
KRT1-201ENST00000252244 KRTAP19-8Q3LI54 63 aa8.12□□□□□ -1.11
KRT1-201ENST00000252244 MT1BP07438 61 aa8.06□□□□□ -1.12
KRT1-201ENST00000252244 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
KRT1-201ENST00000252244 LCE3AQ5TA76 89 aa7.96□□□□□ -1.14
KRT1-201ENST00000252244 KRTAP10-5P60370 271 aa7.95□□□□□ -1.14
KRT1-201ENST00000252244 MT1XP80297 61 aa7.95□□□□□ -1.14
KRT1-201ENST00000252244 LUZP6Q538Z0 58 aa7.8□□□□□ -1.16
KRT1-201ENST00000252244 LCE2BO14633 110 aa7.74□□□□□ -1.17
KRT1-201ENST00000252244 LCE2AQ5TA79 106 aaPredicted RBP7.73□□□□□ -1.17
KRT1-201ENST00000252244 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
KRT1-201ENST00000252244 KRTAP10-7P60409 375 aaPredicted RBP7.72□□□□□ -1.17
KRT1-201ENST00000252244 SPRR5A0A1B0GTR4 108 aa7.72□□□□□ -1.17
KRT1-201ENST00000252244 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
KRT1-201ENST00000252244 USH2AO75445 5202 aa7.68□□□□□ -1.18
KRT1-201ENST00000252244 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
KRT1-201ENST00000252244 KRTAP12-3P60328 96 aa7.58□□□□□ -1.2
KRT1-201ENST00000252244 KMT2DO14686 5537 aa7.44□□□□□ -1.22
KRT1-201ENST00000252244 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
KRT1-201ENST00000252244 KRTAP4-8A0A0G2JLE6 195 aa7.31□□□□□ -1.24
KRT1-201ENST00000252244 KRTAP4-8Q9BYQ9 185 aa7.31□□□□□ -1.24
KRT1-201ENST00000252244 A0A0A0MQY5 61 aa7.27□□□□□ -1.24
KRT1-201ENST00000252244 SSPOA2VEC9 5147 aa7.19□□□□□ -1.26
KRT1-201ENST00000252244 LCE3CQ5T5A8 94 aa7.11□□□□□ -1.27
KRT1-201ENST00000252244 KRTAP19-7Q3SYF9 63 aa7.08□□□□□ -1.28
KRT1-201ENST00000252244 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
KRT1-201ENST00000252244 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
KRT1-201ENST00000252244 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
KRT1-201ENST00000252244 MT1EP04732 61 aa6.89□□□□□ -1.31
KRT1-201ENST00000252244 KRTAP9-6A8MVA2 160 aa6.87□□□□□ -1.31
KRT1-201ENST00000252244 MT1LQ93083 61 aa6.86□□□□□ -1.31
KRT1-201ENST00000252244 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
KRT1-201ENST00000252244 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
KRT1-201ENST00000252244 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
KRT1-201ENST00000252244 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
KRT1-201ENST00000252244 INE1O15225 51 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms