RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 RYR1P21817 5038 aa2.37□□□□□ -2.03
UBE4A-201ENST00000252108 KRTAP16-1A8MUX0 517 aa2.36□□□□□ -2.03
UBE4A-201ENST00000252108 NOTCH2NLQ7Z3S9 236 aa2.36□□□□□ -2.03
UBE4A-201ENST00000252108 KRTAP1-4P0C5Y4 121 aa2.36□□□□□ -2.03
UBE4A-201ENST00000252108 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
UBE4A-201ENST00000252108 Q8N1X5 172 aa2.35□□□□□ -2.03
UBE4A-201ENST00000252108 H1FX-AS1Q4G0G2 97 aa2.35□□□□□ -2.03
UBE4A-201ENST00000252108 KRTAP13-2Q52LG2 175 aa2.34□□□□□ -2.04
UBE4A-201ENST00000252108 LOC100996750A0A140TA64 210 aa2.33□□□□□ -2.04
UBE4A-201ENST00000252108 KRTAP4-6Q9BYQ5 205 aa2.33□□□□□ -2.04
UBE4A-201ENST00000252108 P0C880 135 aa2.33□□□□□ -2.04
UBE4A-201ENST00000252108 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
UBE4A-201ENST00000252108 KRTAP10-2P60368 255 aa2.31□□□□□ -2.04
UBE4A-201ENST00000252108 A0A1B0GVY2 172 aa2.31□□□□□ -2.04
UBE4A-201ENST00000252108 ROMO1P60602 79 aa2.31□□□□□ -2.04
UBE4A-201ENST00000252108 M0QZ58 72 aa2.31□□□□□ -2.04
UBE4A-201ENST00000252108 RPL37P61927 97 aaKnown RBP2.3□□□□□ -2.04
UBE4A-201ENST00000252108 A8MUU9 505 aa2.3□□□□□ -2.04
UBE4A-201ENST00000252108 C20orf166-AS1Q96NR2 134 aa2.29□□□□□ -2.04
UBE4A-201ENST00000252108 EPPK1P58107 5090 aaKnown RBP2.29□□□□□ -2.04
UBE4A-201ENST00000252108 KRTAP10-1P60331 282 aa2.29□□□□□ -2.04
UBE4A-201ENST00000252108 NDUFAF8A1L188 74 aa2.28□□□□□ -2.05
UBE4A-201ENST00000252108 ABCA13Q86UQ4 5058 aa2.27□□□□□ -2.05
UBE4A-201ENST00000252108 MYCBP2O75592 4640 aa2.25□□□□□ -2.05
UBE4A-201ENST00000252108 LPAP08519 4548 aa2.24□□□□□ -2.05
UBE4A-201ENST00000252108 KIAA1109Q2LD37 5005 aa2.24□□□□□ -2.05
UBE4A-201ENST00000252108 H0YAA0 97 aa2.24□□□□□ -2.05
UBE4A-201ENST00000252108 MUC17Q685J3 4493 aa2.23□□□□□ -2.05
UBE4A-201ENST00000252108 KRTAP10-10P60014 251 aa2.22□□□□□ -2.05
UBE4A-201ENST00000252108 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
UBE4A-201ENST00000252108 KRTAP3-1Q9BYR8 98 aa2.21□□□□□ -2.06
UBE4A-201ENST00000252108 BIRC6Q9NR09 4857 aa2.2□□□□□ -2.06
UBE4A-201ENST00000252108 KRTAP10-8P60410 259 aa2.19□□□□□ -2.06
UBE4A-201ENST00000252108 LCE2DQ5TA82 110 aaPredicted RBP2.19□□□□□ -2.06
UBE4A-201ENST00000252108 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
UBE4A-201ENST00000252108 HERC2O95714 4834 aa2.17□□□□□ -2.06
UBE4A-201ENST00000252108 LRP2P98164 4655 aa2.17□□□□□ -2.06
UBE4A-201ENST00000252108 FLGP20930 4061 aaPredicted RBP2.16□□□□□ -2.06
UBE4A-201ENST00000252108 KRTAP3-3Q9BYR6 98 aa2.14□□□□□ -2.07
UBE4A-201ENST00000252108 MT1HL1P0DM35 61 aa2.14□□□□□ -2.07
UBE4A-201ENST00000252108 KRTAP23-1A1A580 65 aa2.13□□□□□ -2.07
UBE4A-201ENST00000252108 KRTAP19-2Q3LHN2 52 aa2.13□□□□□ -2.07
UBE4A-201ENST00000252108 PP632Q6XCG6 107 aa2.13□□□□□ -2.07
UBE4A-201ENST00000252108 TNP1P09430 55 aa2.12□□□□□ -2.07
UBE4A-201ENST00000252108 KRTAP3-2Q9BYR7 98 aa2.1□□□□□ -2.07
UBE4A-201ENST00000252108 HMCN2Q8NDA2 5059 aa2.09□□□□□ -2.07
UBE4A-201ENST00000252108 XP32Q5T750 250 aa2.09□□□□□ -2.07
UBE4A-201ENST00000252108 PCLOQ9Y6V0 5065 aa2.09□□□□□ -2.07
UBE4A-201ENST00000252108 KRTAP10-6P60371 365 aaPredicted RBP2.09□□□□□ -2.08
UBE4A-201ENST00000252108 HERC1Q15751 4861 aa2.08□□□□□ -2.08
UBE4A-201ENST00000252108 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
UBE4A-201ENST00000252108 DMBT1Q9UGM3 2413 aaPredicted RBP2.06□□□□□ -2.08
UBE4A-201ENST00000252108 KRTAP12-1P59990 96 aa2.05□□□□□ -2.08
UBE4A-201ENST00000252108 C10orf95Q9H7T3 257 aa2.04□□□□□ -2.08
UBE4A-201ENST00000252108 KRTAP15-1Q3LI76 137 aa2.04□□□□□ -2.08
UBE4A-201ENST00000252108 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
UBE4A-201ENST00000252108 KRTAP12-2P59991 146 aa2.03□□□□□ -2.08
UBE4A-201ENST00000252108 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
UBE4A-201ENST00000252108 MUC2Q02817 5179 aa2.01□□□□□ -2.09
UBE4A-201ENST00000252108 KRTAP4-5Q9BYR2 181 aa2□□□□□ -2.09
UBE4A-201ENST00000252108 KRTAP5-2Q701N4 177 aa2□□□□□ -2.09
UBE4A-201ENST00000252108 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
UBE4A-201ENST00000252108 LORP23490 312 aaPredicted RBP1.97□□□□□ -2.09
UBE4A-201ENST00000252108 CRCT1Q9UGL9 99 aa1.97□□□□□ -2.09
UBE4A-201ENST00000252108 RNF213Q63HN8 5207 aa1.95□□□□□ -2.1
UBE4A-201ENST00000252108 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
UBE4A-201ENST00000252108 LCE2CQ5TA81 110 aa1.93□□□□□ -2.1
UBE4A-201ENST00000252108 FAT4Q6V0I7 4981 aa1.92□□□□□ -2.1
UBE4A-201ENST00000252108 INE1O15225 51 aa1.88□□□□□ -2.11
UBE4A-201ENST00000252108 KRTAP19-4Q3LI73 84 aa1.82□□□□□ -2.12
UBE4A-201ENST00000252108 KRTAP19-1Q8IUB9 90 aa1.81□□□□□ -2.12
UBE4A-201ENST00000252108 KRTAP8-1Q8IUC2 63 aa1.81□□□□□ -2.12
UBE4A-201ENST00000252108 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
UBE4A-201ENST00000252108 LCE2BO14633 110 aa1.79□□□□□ -2.12
UBE4A-201ENST00000252108 KRTAP9-8Q9BYQ0 159 aa1.79□□□□□ -2.12
UBE4A-201ENST00000252108 SPRR5A0A1B0GTR4 108 aa1.78□□□□□ -2.12
UBE4A-201ENST00000252108 KRTAP10-7P60409 375 aaPredicted RBP1.77□□□□□ -2.13
UBE4A-201ENST00000252108 MT1HP80294 61 aa1.76□□□□□ -2.13
UBE4A-201ENST00000252108 KRTAP19-8Q3LI54 63 aa1.76□□□□□ -2.13
UBE4A-201ENST00000252108 MT1FP04733 61 aa1.73□□□□□ -2.13
UBE4A-201ENST00000252108 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
UBE4A-201ENST00000252108 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.73□□□□□ -2.13
UBE4A-201ENST00000252108 MT2AP02795 61 aa1.73□□□□□ -2.13
UBE4A-201ENST00000252108 MT1BP07438 61 aa1.72□□□□□ -2.13
UBE4A-201ENST00000252108 SPRR2EP22531 72 aa1.72□□□□□ -2.13
UBE4A-201ENST00000252108 SPRR2BP35325 72 aa1.72□□□□□ -2.13
UBE4A-201ENST00000252108 SPRR2AP35326 72 aa1.72□□□□□ -2.13
UBE4A-201ENST00000252108 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
UBE4A-201ENST00000252108 KRTAP9-3Q9BYQ3 159 aa1.71□□□□□ -2.14
UBE4A-201ENST00000252108 KRTAP4-2Q9BYR5 136 aa1.71□□□□□ -2.14
UBE4A-201ENST00000252108 KRTAP10-12P60413 245 aa1.7□□□□□ -2.14
UBE4A-201ENST00000252108 KRTAP10-5P60370 271 aa1.69□□□□□ -2.14
UBE4A-201ENST00000252108 LCE3AQ5TA76 89 aa1.69□□□□□ -2.14
UBE4A-201ENST00000252108 MT1XP80297 61 aa1.69□□□□□ -2.14
UBE4A-201ENST00000252108 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
UBE4A-201ENST00000252108 LCE2AQ5TA79 106 aaPredicted RBP1.68□□□□□ -2.14
UBE4A-201ENST00000252108 USH2AO75445 5202 aa1.68□□□□□ -2.14
UBE4A-201ENST00000252108 SPRR2DP22532 72 aa1.68□□□□□ -2.14
UBE4A-201ENST00000252108 MT3P25713 68 aa1.68□□□□□ -2.14
UBE4A-201ENST00000252108 KRTAP4-8Q9BYQ9 185 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms