RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 C20orf197Q8N268 126 aa6.76□□□□□ -1.33
LSM8-201ENST00000249299 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
LSM8-201ENST00000249299 NDUFC1O43677 76 aa6.75□□□□□ -1.33
LSM8-201ENST00000249299 MUC17Q685J3 4493 aa6.74□□□□□ -1.33
LSM8-201ENST00000249299 PCP4P48539 62 aa6.74□□□□□ -1.33
LSM8-201ENST00000249299 SNURFQ9Y675 71 aa6.7□□□□□ -1.34
LSM8-201ENST00000249299 CCDC179H3BU77 68 aa6.68□□□□□ -1.34
LSM8-201ENST00000249299 SPANXA2-OT1Q8N9U9 137 aa6.66□□□□□ -1.34
LSM8-201ENST00000249299 HRES1P13985 223 aa6.65□□□□□ -1.35
LSM8-201ENST00000249299 MPLKIPQ8TAP9 179 aa6.65□□□□□ -1.35
LSM8-201ENST00000249299 H7BZZ5 65 aa6.63□□□□□ -1.35
LSM8-201ENST00000249299 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
LSM8-201ENST00000249299 RBM12B-AS1Q9P1G2 102 aa6.62□□□□□ -1.35
LSM8-201ENST00000249299 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
LSM8-201ENST00000249299 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
LSM8-201ENST00000249299 A8MUN3 132 aa6.6□□□□□ -1.35
LSM8-201ENST00000249299 COX6B2Q6YFQ2 88 aa6.6□□□□□ -1.35
LSM8-201ENST00000249299 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
LSM8-201ENST00000249299 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
LSM8-201ENST00000249299 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
LSM8-201ENST00000249299 TMEM258P61165 79 aa6.55□□□□□ -1.36
LSM8-201ENST00000249299 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
LSM8-201ENST00000249299 MUC2Q02817 5179 aa6.53□□□□□ -1.36
LSM8-201ENST00000249299 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
LSM8-201ENST00000249299 ACYP2P14621 99 aa6.5□□□□□ -1.37
LSM8-201ENST00000249299 FAM236DA0A1B0GTK5 79 aa6.5□□□□□ -1.37
LSM8-201ENST00000249299 FAM236CP0DP71 79 aa6.5□□□□□ -1.37
LSM8-201ENST00000249299 H1FX-AS1Q4G0G2 97 aa6.5□□□□□ -1.37
LSM8-201ENST00000249299 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
LSM8-201ENST00000249299 S4R3F8 94 aa6.37□□□□□ -1.39
LSM8-201ENST00000249299 CHKB-CPT1BH3BT56 60 aa6.35□□□□□ -1.39
LSM8-201ENST00000249299 COA5Q86WW8 74 aa6.35□□□□□ -1.39
LSM8-201ENST00000249299 SPTSSBQ8NFR3 76 aa6.35□□□□□ -1.39
LSM8-201ENST00000249299 FLGP20930 4061 aaPredicted RBP6.35□□□□□ -1.39
LSM8-201ENST00000249299 SERP1Q9Y6X1 66 aa6.34□□□□□ -1.39
LSM8-201ENST00000249299 LCA10Q71F78 164 aa6.32□□□□□ -1.4
LSM8-201ENST00000249299 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
LSM8-201ENST00000249299 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
LSM8-201ENST00000249299 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
LSM8-201ENST00000249299 MT1HP80294 61 aa6.28□□□□□ -1.4
LSM8-201ENST00000249299 SVIPQ8NHG7 77 aa6.24□□□□□ -1.41
LSM8-201ENST00000249299 M0R2T5 61 aa6.21□□□□□ -1.42
LSM8-201ENST00000249299 H0YAA0 97 aa6.2□□□□□ -1.42
LSM8-201ENST00000249299 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
LSM8-201ENST00000249299 V9GYY9 64 aa6.14□□□□□ -1.43
LSM8-201ENST00000249299 SEC61GP60059 68 aa6.1□□□□□ -1.43
LSM8-201ENST00000249299 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
LSM8-201ENST00000249299 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
LSM8-201ENST00000249299 Q1T7F1 81 aa6.09□□□□□ -1.43
LSM8-201ENST00000249299 PRR15LQ9BU68 103 aa6.05□□□□□ -1.44
LSM8-201ENST00000249299 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
LSM8-201ENST00000249299 A0A1B0GU69 56 aa6.03□□□□□ -1.44
LSM8-201ENST00000249299 CRIPTQ9P021 101 aa6□□□□□ -1.45
LSM8-201ENST00000249299 MT2AP02795 61 aa5.99□□□□□ -1.45
LSM8-201ENST00000249299 P0C880 135 aa5.97□□□□□ -1.45
LSM8-201ENST00000249299 KRTAP10-10P60014 251 aa5.95□□□□□ -1.46
LSM8-201ENST00000249299 M0QZ58 72 aa5.93□□□□□ -1.46
LSM8-201ENST00000249299 MT1FP04733 61 aa5.93□□□□□ -1.46
LSM8-201ENST00000249299 A0A1B0GU33 70 aa5.92□□□□□ -1.46
LSM8-201ENST00000249299 PSPHP1O15172 72 aa5.88□□□□□ -1.47
LSM8-201ENST00000249299 Q5VV11 94 aa5.88□□□□□ -1.47
LSM8-201ENST00000249299 R4GN34 69 aa5.88□□□□□ -1.47
LSM8-201ENST00000249299 UQCR11O14957 56 aa5.86□□□□□ -1.47
LSM8-201ENST00000249299 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
LSM8-201ENST00000249299 KRTAP13-4Q3LI77 160 aa5.76□□□□□ -1.49
LSM8-201ENST00000249299 A6NED7 52 aa5.75□□□□□ -1.49
LSM8-201ENST00000249299 A6NN06 94 aa5.75□□□□□ -1.49
LSM8-201ENST00000249299 LCE1AQ5T7P2 110 aa5.75□□□□□ -1.49
LSM8-201ENST00000249299 MIR22HGQ0VDD5 57 aa5.74□□□□□ -1.49
LSM8-201ENST00000249299 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
LSM8-201ENST00000249299 KRTAP19-8Q3LI54 63 aa5.73□□□□□ -1.49
LSM8-201ENST00000249299 A0A0A0MQY5 61 aa5.72□□□□□ -1.49
LSM8-201ENST00000249299 LINC01554Q52M75 96 aa5.67□□□□□ -1.5
LSM8-201ENST00000249299 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
LSM8-201ENST00000249299 A0A0D9SG42 100 aa5.63□□□□□ -1.51
LSM8-201ENST00000249299 A8MU10 97 aa5.62□□□□□ -1.51
LSM8-201ENST00000249299 PLAC4Q8WY50 150 aa5.61□□□□□ -1.51
LSM8-201ENST00000249299 MT1BP07438 61 aa5.6□□□□□ -1.51
LSM8-201ENST00000249299 K7ERS5 55 aa5.59□□□□□ -1.51
LSM8-201ENST00000249299 KRTAP12-1P59990 96 aa5.59□□□□□ -1.51
LSM8-201ENST00000249299 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
LSM8-201ENST00000249299 KRTAP12-2P59991 146 aa5.53□□□□□ -1.52
LSM8-201ENST00000249299 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
LSM8-201ENST00000249299 USH2AO75445 5202 aa5.51□□□□□ -1.53
LSM8-201ENST00000249299 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
LSM8-201ENST00000249299 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
LSM8-201ENST00000249299 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
LSM8-201ENST00000249299 KRTAP19-6Q3LI70 58 aa5.43□□□□□ -1.54
LSM8-201ENST00000249299 KRTAP10-5P60370 271 aa5.4□□□□□ -1.55
LSM8-201ENST00000249299 FSIP2Q5CZC0 6907 aa5.39□□□□□ -1.55
LSM8-201ENST00000249299 MT1XP80297 61 aa5.38□□□□□ -1.55
LSM8-201ENST00000249299 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.38□□□□□ -1.55
LSM8-201ENST00000249299 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
LSM8-201ENST00000249299 CRCT1Q9UGL9 99 aa5.32□□□□□ -1.56
LSM8-201ENST00000249299 KRTAP2-2Q9BYT5 123 aa5.3□□□□□ -1.56
LSM8-201ENST00000249299 C10orf95Q9H7T3 257 aa5.28□□□□□ -1.56
LSM8-201ENST00000249299 ROMO1P60602 79 aa5.27□□□□□ -1.57
LSM8-201ENST00000249299 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
LSM8-201ENST00000249299 TNP1P09430 55 aa5.23□□□□□ -1.57
LSM8-201ENST00000249299 KRTAP25-1Q3LHN0 102 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms