RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 FAM236BA0A1B0GV22 79 aa11.24□□□□□ -0.61
SDF2L1-201ENST00000248958 A8MUN3 132 aa11.24□□□□□ -0.61
SDF2L1-201ENST00000248958 KRTAP3-3Q9BYR6 98 aa11.23□□□□□ -0.61
SDF2L1-201ENST00000248958 FCGBPQ9Y6R7 5405 aaPredicted RBP11.23□□□□□ -0.61
SDF2L1-201ENST00000248958 KLKP1Q107X0 134 aa11.2□□□□□ -0.62
SDF2L1-201ENST00000248958 KRTAP19-1Q8IUB9 90 aa11.19□□□□□ -0.62
SDF2L1-201ENST00000248958 NDUFC1O43677 76 aa11.13□□□□□ -0.63
SDF2L1-201ENST00000248958 MT-ATP8P03928 68 aa11.11□□□□□ -0.63
SDF2L1-201ENST00000248958 KRTAP19-6Q3LI70 58 aa11.07□□□□□ -0.64
SDF2L1-201ENST00000248958 SMIM20Q8N5G0 67 aa11.06□□□□□ -0.64
SDF2L1-201ENST00000248958 SPRR2GQ9BYE4 73 aa11□□□□□ -0.65
SDF2L1-201ENST00000248958 H0YAA0 97 aa10.99□□□□□ -0.65
SDF2L1-201ENST00000248958 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
SDF2L1-201ENST00000248958 CRIPTQ9P021 101 aa10.97□□□□□ -0.65
SDF2L1-201ENST00000248958 MACF1Q9UPN3 7388 aaKnown RBP10.97□□□□□ -0.65
SDF2L1-201ENST00000248958 DMAC1Q96GE9 116 aa10.95□□□□□ -0.66
SDF2L1-201ENST00000248958 SYNE2Q8WXH0 6885 aaKnown RBP10.9□□□□□ -0.66
SDF2L1-201ENST00000248958 Q5VV11 94 aa10.9□□□□□ -0.66
SDF2L1-201ENST00000248958 KRTAP19-8Q3LI54 63 aa10.89□□□□□ -0.67
SDF2L1-201ENST00000248958 MT1BP07438 61 aa10.82□□□□□ -0.68
SDF2L1-201ENST00000248958 ADM2Q7Z4H4 148 aa10.82□□□□□ -0.68
SDF2L1-201ENST00000248958 ACYP2P14621 99 aa10.77□□□□□ -0.69
SDF2L1-201ENST00000248958 C20orf197Q8N268 126 aa10.69□□□□□ -0.7
SDF2L1-201ENST00000248958 SERP2Q8N6R1 65 aa10.68□□□□□ -0.7
SDF2L1-201ENST00000248958 SNURFQ9Y675 71 aa10.68□□□□□ -0.7
SDF2L1-201ENST00000248958 A6NN06 94 aa10.66□□□□□ -0.7
SDF2L1-201ENST00000248958 SPTSSBQ8NFR3 76 aa10.63□□□□□ -0.71
SDF2L1-201ENST00000248958 KRTAP6-3Q3LI67 103 aa10.59□□□□□ -0.71
SDF2L1-201ENST00000248958 SPANXA2-OT1Q8N9U9 137 aa10.59□□□□□ -0.71
SDF2L1-201ENST00000248958 KRTAP10-5P60370 271 aa10.57□□□□□ -0.72
SDF2L1-201ENST00000248958 P0C880 135 aa10.56□□□□□ -0.72
SDF2L1-201ENST00000248958 R4GN34 69 aa10.56□□□□□ -0.72
SDF2L1-201ENST00000248958 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
SDF2L1-201ENST00000248958 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
SDF2L1-201ENST00000248958 M0QZ58 72 aa10.46□□□□□ -0.73
SDF2L1-201ENST00000248958 COX7CP15954 63 aa10.42□□□□□ -0.74
SDF2L1-201ENST00000248958 PLAC4Q8WY50 150 aa10.41□□□□□ -0.74
SDF2L1-201ENST00000248958 PRO2289Q9P1D8 64 aa10.33□□□□□ -0.76
SDF2L1-201ENST00000248958 LINC01554Q52M75 96 aa10.27□□□□□ -0.77
SDF2L1-201ENST00000248958 NEBP20929 6669 aa10.26□□□□□ -0.77
SDF2L1-201ENST00000248958 COA5Q86WW8 74 aa10.23□□□□□ -0.77
SDF2L1-201ENST00000248958 MT1XP80297 61 aa10.2□□□□□ -0.78
SDF2L1-201ENST00000248958 MUC12Q9UKN1 5478 aa10.19□□□□□ -0.78
SDF2L1-201ENST00000248958 H7BZZ5 65 aa10.18□□□□□ -0.78
SDF2L1-201ENST00000248958 ANAPC13Q9BS18 74 aa10.15□□□□□ -0.78
SDF2L1-201ENST00000248958 CYSTM1Q9H1C7 97 aa10.11□□□□□ -0.79
SDF2L1-201ENST00000248958 SEC61GP60059 68 aa10.05□□□□□ -0.8
SDF2L1-201ENST00000248958 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
SDF2L1-201ENST00000248958 KRTAP5-9P26371 169 aa10□□□□□ -0.81
SDF2L1-201ENST00000248958 KRTAP20-1Q3LI63 56 aa9.99□□□□□ -0.81
SDF2L1-201ENST00000248958 KRTAP12-2P59991 146 aa9.98□□□□□ -0.81
SDF2L1-201ENST00000248958 KRTAP13-4Q3LI77 160 aa9.94□□□□□ -0.82
SDF2L1-201ENST00000248958 KMT2DO14686 5537 aa9.89□□□□□ -0.83
SDF2L1-201ENST00000248958 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
SDF2L1-201ENST00000248958 MDN1Q9NU22 5596 aa9.86□□□□□ -0.83
SDF2L1-201ENST00000248958 ATP5EP56381 51 aaPredicted RBP9.82□□□□□ -0.84
SDF2L1-201ENST00000248958 A0A1B0GU33 70 aa9.81□□□□□ -0.84
SDF2L1-201ENST00000248958 KRTAP8-1Q8IUC2 63 aa9.79□□□□□ -0.84
SDF2L1-201ENST00000248958 A0A1B0GU69 56 aa9.75□□□□□ -0.85
SDF2L1-201ENST00000248958 CAMK2N1Q7Z7J9 78 aa9.74□□□□□ -0.85
SDF2L1-201ENST00000248958 KRTAP10-7P60409 375 aaPredicted RBP9.73□□□□□ -0.85
SDF2L1-201ENST00000248958 KRTAP10-12P60413 245 aa9.73□□□□□ -0.85
SDF2L1-201ENST00000248958 SPRR2FQ96RM1 72 aa9.73□□□□□ -0.85
SDF2L1-201ENST00000248958 SPATA8Q6RVD6 105 aa9.71□□□□□ -0.86
SDF2L1-201ENST00000248958 A0A0D9SG42 100 aa9.68□□□□□ -0.86
SDF2L1-201ENST00000248958 KRTAP4-8A0A0G2JLE6 195 aa9.66□□□□□ -0.86
SDF2L1-201ENST00000248958 KRTAP4-8Q9BYQ9 185 aa9.66□□□□□ -0.86
SDF2L1-201ENST00000248958 KRTAP2-3P0C7H8 128 aa9.61□□□□□ -0.87
SDF2L1-201ENST00000248958 TMEM258P61165 79 aa9.61□□□□□ -0.87
SDF2L1-201ENST00000248958 KRTAP2-4Q9BYR9 128 aa9.61□□□□□ -0.87
SDF2L1-201ENST00000248958 SMIM26A0A096LP01 95 aa9.57□□□□□ -0.88
SDF2L1-201ENST00000248958 SPINT4Q6UDR6 99 aa9.57□□□□□ -0.88
SDF2L1-201ENST00000248958 PRR15LQ9BU68 103 aa9.56□□□□□ -0.88
SDF2L1-201ENST00000248958 SPRR2EP22531 72 aa9.54□□□□□ -0.88
SDF2L1-201ENST00000248958 SPRR2BP35325 72 aa9.54□□□□□ -0.88
SDF2L1-201ENST00000248958 SPRR2AP35326 72 aa9.54□□□□□ -0.88
SDF2L1-201ENST00000248958 KRTAP12-1P59990 96 aa9.51□□□□□ -0.89
SDF2L1-201ENST00000248958 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
SDF2L1-201ENST00000248958 LCE1AQ5T7P2 110 aa9.44□□□□□ -0.9
SDF2L1-201ENST00000248958 A8MU10 97 aa9.38□□□□□ -0.91
SDF2L1-201ENST00000248958 KRTAP2-2Q9BYT5 123 aa9.29□□□□□ -0.92
SDF2L1-201ENST00000248958 KRTAP2-1Q9BYU5 128 aa9.29□□□□□ -0.92
SDF2L1-201ENST00000248958 UQCR11O14957 56 aa9.23□□□□□ -0.93
SDF2L1-201ENST00000248958 SPRR2DP22532 72 aa9.22□□□□□ -0.93
SDF2L1-201ENST00000248958 KRTAP19-7Q3SYF9 63 aa9.12□□□□□ -0.95
SDF2L1-201ENST00000248958 V9GYY9 64 aa9.11□□□□□ -0.95
SDF2L1-201ENST00000248958 TNP1P09430 55 aa9.08□□□□□ -0.96
SDF2L1-201ENST00000248958 C10orf95Q9H7T3 257 aa9.07□□□□□ -0.96
SDF2L1-201ENST00000248958 MT1EP04732 61 aa9.04□□□□□ -0.96
SDF2L1-201ENST00000248958 MIR22HGQ0VDD5 57 aa9.01□□□□□ -0.97
SDF2L1-201ENST00000248958 Q1T7F1 81 aa9□□□□□ -0.97
SDF2L1-201ENST00000248958 LCE3BQ5TA77 95 aa8.98□□□□□ -0.97
SDF2L1-201ENST00000248958 KRTAP19-5Q3LI72 72 aa8.94□□□□□ -0.98
SDF2L1-201ENST00000248958 KRTAP19-3Q7Z4W3 81 aa8.94□□□□□ -0.98
SDF2L1-201ENST00000248958 LCE5AQ5TCM9 118 aa8.93□□□□□ -0.98
SDF2L1-201ENST00000248958 PSPHP1O15172 72 aa8.92□□□□□ -0.98
SDF2L1-201ENST00000248958 K7ERS5 55 aa8.87□□□□□ -0.99
SDF2L1-201ENST00000248958 LCE3AQ5TA76 89 aa8.86□□□□□ -0.99
SDF2L1-201ENST00000248958 MT1GP13640 62 aa8.79□□□□□ -1
SDF2L1-201ENST00000248958 PCP4P48539 62 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms