RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 EPPK1P58107 5090 aaKnown RBP12.65□□□□□ -0.39
GDF1-201ENST00000247005 MIR22HGQ0VDD5 57 aa12.61□□□□□ -0.39
GDF1-201ENST00000247005 UQCR11O14957 56 aa12.61□□□□□ -0.39
GDF1-201ENST00000247005 CSAG1Q6PB30 78 aa12.55□□□□□ -0.4
GDF1-201ENST00000247005 XP32Q5T750 250 aa12.55□□□□□ -0.4
GDF1-201ENST00000247005 MT1HL1P0DM35 61 aa12.54□□□□□ -0.4
GDF1-201ENST00000247005 COX6B2Q6YFQ2 88 aa12.54□□□□□ -0.4
GDF1-201ENST00000247005 RPL37P61927 97 aaKnown RBP12.52□□□□□ -0.41
GDF1-201ENST00000247005 LPAP08519 4548 aa12.38□□□□□ -0.43
GDF1-201ENST00000247005 LRP2P98164 4655 aa12.34□□□□□ -0.43
GDF1-201ENST00000247005 ABCA13Q86UQ4 5058 aa12.33□□□□□ -0.44
GDF1-201ENST00000247005 H0YAA0 97 aa12.32□□□□□ -0.44
GDF1-201ENST00000247005 A0A1B0GU33 70 aa12.29□□□□□ -0.44
GDF1-201ENST00000247005 KRTAP4-5Q9BYR2 181 aa12.29□□□□□ -0.44
GDF1-201ENST00000247005 KRTAP3-3Q9BYR6 98 aa12.26□□□□□ -0.45
GDF1-201ENST00000247005 H1FX-AS1Q4G0G2 97 aa12.24□□□□□ -0.45
GDF1-201ENST00000247005 S4R3F8 94 aa12.13□□□□□ -0.47
GDF1-201ENST00000247005 TPRXLQ17RH7 258 aa12.1□□□□□ -0.47
GDF1-201ENST00000247005 KRTAP25-1Q3LHN0 102 aa12.08□□□□□ -0.48
GDF1-201ENST00000247005 KRTAP10-6P60371 365 aaPredicted RBP12.06□□□□□ -0.48
GDF1-201ENST00000247005 ROMO1P60602 79 aa12.03□□□□□ -0.48
GDF1-201ENST00000247005 KRTAP3-2Q9BYR7 98 aa12□□□□□ -0.49
GDF1-201ENST00000247005 KRTAP13-4Q3LI77 160 aa11.95□□□□□ -0.5
GDF1-201ENST00000247005 P0C880 135 aa11.92□□□□□ -0.5
GDF1-201ENST00000247005 HERC2O95714 4834 aa11.9□□□□□ -0.5
GDF1-201ENST00000247005 A0A0D9SG42 100 aa11.85□□□□□ -0.51
GDF1-201ENST00000247005 CRIPTQ9P021 101 aa11.83□□□□□ -0.52
GDF1-201ENST00000247005 J3QL48 77 aa11.77□□□□□ -0.53
GDF1-201ENST00000247005 K7ERS5 55 aa11.73□□□□□ -0.53
GDF1-201ENST00000247005 MUC17Q685J3 4493 aa11.72□□□□□ -0.53
GDF1-201ENST00000247005 KRTAP4-1Q9BYQ7 146 aa11.67□□□□□ -0.54
GDF1-201ENST00000247005 SEC61BP60468 96 aaKnown RBP11.65□□□□□ -0.54
GDF1-201ENST00000247005 BIRC6Q9NR09 4857 aa11.59□□□□□ -0.55
GDF1-201ENST00000247005 MUC2Q02817 5179 aa11.56□□□□□ -0.56
GDF1-201ENST00000247005 KRTAP12-2P59991 146 aa11.52□□□□□ -0.56
GDF1-201ENST00000247005 SPINT4Q6UDR6 99 aa11.45□□□□□ -0.58
GDF1-201ENST00000247005 HERC1Q15751 4861 aa11.43□□□□□ -0.58
GDF1-201ENST00000247005 KRTAP12-1P59990 96 aa11.41□□□□□ -0.58
GDF1-201ENST00000247005 PCLOQ9Y6V0 5065 aa11.39□□□□□ -0.59
GDF1-201ENST00000247005 M0QZ58 72 aa11.38□□□□□ -0.59
GDF1-201ENST00000247005 KRTAP19-2Q3LHN2 52 aa11.35□□□□□ -0.59
GDF1-201ENST00000247005 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
GDF1-201ENST00000247005 R4GN34 69 aa11.27□□□□□ -0.61
GDF1-201ENST00000247005 C10orf95Q9H7T3 257 aa11.26□□□□□ -0.61
GDF1-201ENST00000247005 NDUFAF8A1L188 74 aa11.24□□□□□ -0.61
GDF1-201ENST00000247005 KRTAP15-1Q3LI76 137 aa11.22□□□□□ -0.61
GDF1-201ENST00000247005 HMCN2Q8NDA2 5059 aa11.2□□□□□ -0.62
GDF1-201ENST00000247005 FLGP20930 4061 aaPredicted RBP11.15□□□□□ -0.62
GDF1-201ENST00000247005 FAT4Q6V0I7 4981 aa10.98□□□□□ -0.65
GDF1-201ENST00000247005 RNF213Q63HN8 5207 aa10.87□□□□□ -0.67
GDF1-201ENST00000247005 UBR4Q5T4S7 5183 aa10.84□□□□□ -0.67
GDF1-201ENST00000247005 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
GDF1-201ENST00000247005 CAMK2N1Q7Z7J9 78 aa10.67□□□□□ -0.7
GDF1-201ENST00000247005 A0A0A0MQY5 61 aa10.58□□□□□ -0.72
GDF1-201ENST00000247005 M0R2T5 61 aa10.56□□□□□ -0.72
GDF1-201ENST00000247005 MT1HP80294 61 aa10.51□□□□□ -0.73
GDF1-201ENST00000247005 KRTAP19-1Q8IUB9 90 aa10.38□□□□□ -0.75
GDF1-201ENST00000247005 LUZP6Q538Z0 58 aa10.36□□□□□ -0.75
GDF1-201ENST00000247005 PLAC4Q8WY50 150 aa10.36□□□□□ -0.75
GDF1-201ENST00000247005 SPRR2GQ9BYE4 73 aa10.34□□□□□ -0.75
GDF1-201ENST00000247005 MT1FP04733 61 aa10.3□□□□□ -0.76
GDF1-201ENST00000247005 MT2AP02795 61 aa10.29□□□□□ -0.76
GDF1-201ENST00000247005 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
GDF1-201ENST00000247005 KRTAP9-8Q9BYQ0 159 aa10.24□□□□□ -0.77
GDF1-201ENST00000247005 TNP1P09430 55 aa10.18□□□□□ -0.78
GDF1-201ENST00000247005 PP632Q6XCG6 107 aa10.16□□□□□ -0.78
GDF1-201ENST00000247005 KRTAP19-8Q3LI54 63 aa9.91□□□□□ -0.82
GDF1-201ENST00000247005 MT1BP07438 61 aa9.87□□□□□ -0.83
GDF1-201ENST00000247005 KRTAP23-1A1A580 65 aa9.86□□□□□ -0.83
GDF1-201ENST00000247005 KRTAP9-3Q9BYQ3 159 aa9.81□□□□□ -0.84
GDF1-201ENST00000247005 LCE3AQ5TA76 89 aa9.77□□□□□ -0.85
GDF1-201ENST00000247005 KRTAP10-5P60370 271 aa9.75□□□□□ -0.85
GDF1-201ENST00000247005 MT1XP80297 61 aa9.74□□□□□ -0.85
GDF1-201ENST00000247005 USH2AO75445 5202 aa9.58□□□□□ -0.88
GDF1-201ENST00000247005 SPRR5A0A1B0GTR4 108 aa9.52□□□□□ -0.89
GDF1-201ENST00000247005 LCE2BO14633 110 aa9.51□□□□□ -0.89
GDF1-201ENST00000247005 KRTAP10-7P60409 375 aaPredicted RBP9.5□□□□□ -0.89
GDF1-201ENST00000247005 LCE2AQ5TA79 106 aaPredicted RBP9.46□□□□□ -0.89
GDF1-201ENST00000247005 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
GDF1-201ENST00000247005 KRTAP8-1Q8IUC2 63 aa9.43□□□□□ -0.9
GDF1-201ENST00000247005 PRO2289Q9P1D8 64 aa9.33□□□□□ -0.92
GDF1-201ENST00000247005 KMT2DO14686 5537 aa9.28□□□□□ -0.92
GDF1-201ENST00000247005 KRTAP12-3P60328 96 aa9.28□□□□□ -0.92
GDF1-201ENST00000247005 KRTAP19-5Q3LI72 72 aa9.03□□□□□ -0.96
GDF1-201ENST00000247005 KRTAP4-8A0A0G2JLE6 195 aa9.02□□□□□ -0.96
GDF1-201ENST00000247005 KRTAP4-8Q9BYQ9 185 aa9.02□□□□□ -0.96
GDF1-201ENST00000247005 FSIP2Q5CZC0 6907 aa8.89□□□□□ -0.99
GDF1-201ENST00000247005 INE1O15225 51 aa8.89□□□□□ -0.99
GDF1-201ENST00000247005 SSPOA2VEC9 5147 aa8.87□□□□□ -0.99
GDF1-201ENST00000247005 LCE3CQ5T5A8 94 aa8.71□□□□□ -1.02
GDF1-201ENST00000247005 KRTAP19-7Q3SYF9 63 aa8.69□□□□□ -1.02
GDF1-201ENST00000247005 KRTAP4-7Q9BYR0 210 aa8.54□□□□□ -1.04
GDF1-201ENST00000247005 KRTAP19-6Q3LI70 58 aa8.52□□□□□ -1.04
GDF1-201ENST00000247005 KRTAP9-6A8MVA2 160 aa8.46□□□□□ -1.06
GDF1-201ENST00000247005 MT1EP04732 61 aa8.44□□□□□ -1.06
GDF1-201ENST00000247005 MT1LQ93083 61 aa8.39□□□□□ -1.07
GDF1-201ENST00000247005 FCGBPQ9Y6R7 5405 aaPredicted RBP8.34□□□□□ -1.07
GDF1-201ENST00000247005 MUC12Q9UKN1 5478 aa8.25□□□□□ -1.09
GDF1-201ENST00000247005 LCE2DQ5TA82 110 aaPredicted RBP8.13□□□□□ -1.11
GDF1-201ENST00000247005 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms