RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 LCE2BO14633 110 aa9.49□□□□□ -0.89
SBDS-201ENST00000246868 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
SBDS-201ENST00000246868 S4R3F8 94 aa9.48□□□□□ -0.89
SBDS-201ENST00000246868 FLGP20930 4061 aaPredicted RBP9.46□□□□□ -0.89
SBDS-201ENST00000246868 CHKB-CPT1BH3BT56 60 aa9.45□□□□□ -0.9
SBDS-201ENST00000246868 COA5Q86WW8 74 aa9.43□□□□□ -0.9
SBDS-201ENST00000246868 FAT4Q6V0I7 4981 aa9.43□□□□□ -0.9
SBDS-201ENST00000246868 LCA10Q71F78 164 aa9.41□□□□□ -0.9
SBDS-201ENST00000246868 MT1HP80294 61 aa9.34□□□□□ -0.91
SBDS-201ENST00000246868 SPTSSBQ8NFR3 76 aa9.34□□□□□ -0.91
SBDS-201ENST00000246868 M0R2T5 61 aa9.33□□□□□ -0.92
SBDS-201ENST00000246868 SERP1Q9Y6X1 66 aa9.33□□□□□ -0.92
SBDS-201ENST00000246868 CSAG1Q6PB30 78 aa9.32□□□□□ -0.92
SBDS-201ENST00000246868 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
SBDS-201ENST00000246868 LCE2AQ5TA79 106 aaPredicted RBP9.16□□□□□ -0.94
SBDS-201ENST00000246868 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
SBDS-201ENST00000246868 H0YAA0 97 aa9.05□□□□□ -0.96
SBDS-201ENST00000246868 SMIM26A0A096LP01 95 aa9.05□□□□□ -0.96
SBDS-201ENST00000246868 SEC61GP60059 68 aa9.02□□□□□ -0.96
SBDS-201ENST00000246868 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
SBDS-201ENST00000246868 LORP23490 312 aaPredicted RBP9□□□□□ -0.97
SBDS-201ENST00000246868 V9GYY9 64 aa8.98□□□□□ -0.97
SBDS-201ENST00000246868 LINC01558Q9Y6Z2 57 aa8.97□□□□□ -0.97
SBDS-201ENST00000246868 A0A1B0GU69 56 aa8.95□□□□□ -0.98
SBDS-201ENST00000246868 KRTAP9-8Q9BYQ0 159 aa8.94□□□□□ -0.98
SBDS-201ENST00000246868 PRR15LQ9BU68 103 aa8.94□□□□□ -0.98
SBDS-201ENST00000246868 Q1T7F1 81 aa8.92□□□□□ -0.98
SBDS-201ENST00000246868 MT2AP02795 61 aa8.91□□□□□ -0.98
SBDS-201ENST00000246868 P0C880 135 aa8.88□□□□□ -0.99
SBDS-201ENST00000246868 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
SBDS-201ENST00000246868 MT1FP04733 61 aa8.84□□□□□ -0.99
SBDS-201ENST00000246868 CRIPTQ9P021 101 aa8.8□□□□□ -1
SBDS-201ENST00000246868 PSPHP1O15172 72 aa8.79□□□□□ -1
SBDS-201ENST00000246868 A0A1B0GU33 70 aa8.76□□□□□ -1.01
SBDS-201ENST00000246868 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
SBDS-201ENST00000246868 R4GN34 69 aa8.75□□□□□ -1.01
SBDS-201ENST00000246868 M0QZ58 72 aa8.7□□□□□ -1.02
SBDS-201ENST00000246868 Q5VV11 94 aa8.68□□□□□ -1.02
SBDS-201ENST00000246868 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.64□□□□□ -1.03
SBDS-201ENST00000246868 UQCR11O14957 56 aa8.64□□□□□ -1.03
SBDS-201ENST00000246868 KRTAP9-3Q9BYQ3 159 aa8.64□□□□□ -1.03
SBDS-201ENST00000246868 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
SBDS-201ENST00000246868 SPRR2GQ9BYE4 73 aa8.62□□□□□ -1.03
SBDS-201ENST00000246868 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
SBDS-201ENST00000246868 KRTAP13-4Q3LI77 160 aa8.59□□□□□ -1.03
SBDS-201ENST00000246868 SPATA8Q6RVD6 105 aa8.58□□□□□ -1.04
SBDS-201ENST00000246868 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
SBDS-201ENST00000246868 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
SBDS-201ENST00000246868 A6NED7 52 aa8.55□□□□□ -1.04
SBDS-201ENST00000246868 LINC01554Q52M75 96 aa8.55□□□□□ -1.04
SBDS-201ENST00000246868 MIR22HGQ0VDD5 57 aa8.51□□□□□ -1.05
SBDS-201ENST00000246868 A0A0D9SG42 100 aa8.47□□□□□ -1.05
SBDS-201ENST00000246868 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
SBDS-201ENST00000246868 A8MU10 97 aa8.41□□□□□ -1.06
SBDS-201ENST00000246868 A6NN06 94 aa8.39□□□□□ -1.07
SBDS-201ENST00000246868 PLAC4Q8WY50 150 aa8.34□□□□□ -1.07
SBDS-201ENST00000246868 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
SBDS-201ENST00000246868 MT1BP07438 61 aa8.3□□□□□ -1.08
SBDS-201ENST00000246868 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
SBDS-201ENST00000246868 KRTAP12-1P59990 96 aa8.27□□□□□ -1.09
SBDS-201ENST00000246868 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
SBDS-201ENST00000246868 K7ERS5 55 aa8.24□□□□□ -1.09
SBDS-201ENST00000246868 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
SBDS-201ENST00000246868 USH2AO75445 5202 aa8.23□□□□□ -1.09
SBDS-201ENST00000246868 KRTAP12-2P59991 146 aa8.23□□□□□ -1.09
SBDS-201ENST00000246868 KRTAP4-8A0A0G2JLE6 195 aa8.2□□□□□ -1.1
SBDS-201ENST00000246868 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
SBDS-201ENST00000246868 KRTAP9-9Q9BYP9 154 aa8.17□□□□□ -1.1
SBDS-201ENST00000246868 KRTAP9-4Q9BYQ2 154 aa8.17□□□□□ -1.1
SBDS-201ENST00000246868 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
SBDS-201ENST00000246868 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
SBDS-201ENST00000246868 PRO0628Q9UI54 55 aa8.04□□□□□ -1.12
SBDS-201ENST00000246868 KRTAP4-12Q9BQ66 201 aa8.03□□□□□ -1.12
SBDS-201ENST00000246868 KRTAP19-6Q3LI70 58 aa8.02□□□□□ -1.13
SBDS-201ENST00000246868 SSPOA2VEC9 5147 aa8.02□□□□□ -1.13
SBDS-201ENST00000246868 MT1XP80297 61 aa7.99□□□□□ -1.13
SBDS-201ENST00000246868 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
SBDS-201ENST00000246868 KRTAP4-7Q9BYR0 210 aa7.97□□□□□ -1.13
SBDS-201ENST00000246868 CRCT1Q9UGL9 99 aa7.95□□□□□ -1.14
SBDS-201ENST00000246868 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
SBDS-201ENST00000246868 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
SBDS-201ENST00000246868 ROMO1P60602 79 aa7.78□□□□□ -1.16
SBDS-201ENST00000246868 FCGBPQ9Y6R7 5405 aaPredicted RBP7.75□□□□□ -1.17
SBDS-201ENST00000246868 LCE1DQ5T752 114 aa7.73□□□□□ -1.17
SBDS-201ENST00000246868 TNP1P09430 55 aa7.72□□□□□ -1.17
SBDS-201ENST00000246868 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
SBDS-201ENST00000246868 KRTAP10-7P60409 375 aaPredicted RBP7.64□□□□□ -1.19
SBDS-201ENST00000246868 KRTAP4-2Q9BYR5 136 aa7.64□□□□□ -1.19
SBDS-201ENST00000246868 KRTAP4-9Q9BYQ8 210 aa7.61□□□□□ -1.19
SBDS-201ENST00000246868 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
SBDS-201ENST00000246868 KRTAP5-3Q6L8H2 238 aa7.41□□□□□ -1.22
SBDS-201ENST00000246868 KTN1-AS1Q86SY8 53 aa7.41□□□□□ -1.22
SBDS-201ENST00000246868 MACF1Q9UPN3 7388 aaKnown RBP7.4□□□□□ -1.22
SBDS-201ENST00000246868 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
SBDS-201ENST00000246868 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
SBDS-201ENST00000246868 KMT2DO14686 5537 aa7.38□□□□□ -1.23
SBDS-201ENST00000246868 PP632Q6XCG6 107 aa7.35□□□□□ -1.23
SBDS-201ENST00000246868 KRTAP8-1Q8IUC2 63 aa7.34□□□□□ -1.24
SBDS-201ENST00000246868 PRAC1Q96KF2 57 aa7.27□□□□□ -1.25
SBDS-201ENST00000246868 SYNE2Q8WXH0 6885 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms