RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 SMR3BP02814 79 aaPredicted RBP6.47□□□□□ -1.37
NR1D1-201ENST00000246672 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
NR1D1-201ENST00000246672 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
NR1D1-201ENST00000246672 PKHD1L1Q86WI1 4243 aa6.43□□□□□ -1.38
NR1D1-201ENST00000246672 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
NR1D1-201ENST00000246672 FAT1Q14517 4588 aa6.39□□□□□ -1.39
NR1D1-201ENST00000246672 S4R3F8 94 aa6.36□□□□□ -1.39
NR1D1-201ENST00000246672 KRTAP12-2P59991 146 aa6.35□□□□□ -1.39
NR1D1-201ENST00000246672 DYNC1H1Q14204 4646 aaKnown RBP6.34□□□□□ -1.39
NR1D1-201ENST00000246672 APOBP04114 4563 aaKnown RBP6.34□□□□□ -1.39
NR1D1-201ENST00000246672 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
NR1D1-201ENST00000246672 KRTAP10-8P60410 259 aa6.28□□□□□ -1.4
NR1D1-201ENST00000246672 KRTAP12-1P59990 96 aa6.25□□□□□ -1.41
NR1D1-201ENST00000246672 HSPG2P98160 4391 aa6.24□□□□□ -1.41
NR1D1-201ENST00000246672 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
NR1D1-201ENST00000246672 KMT2CQ8NEZ4 4911 aaKnown RBP6.23□□□□□ -1.41
NR1D1-201ENST00000246672 XP32Q5T750 250 aa6.23□□□□□ -1.41
NR1D1-201ENST00000246672 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
NR1D1-201ENST00000246672 A0A1B0GVY2 172 aa6.14□□□□□ -1.43
NR1D1-201ENST00000246672 MYCBP2O75592 4640 aa6.14□□□□□ -1.43
NR1D1-201ENST00000246672 TNXBP22105 4242 aa6.12□□□□□ -1.43
NR1D1-201ENST00000246672 A0A0A0MQY5 61 aa6.1□□□□□ -1.43
NR1D1-201ENST00000246672 RYR2Q92736 4967 aa6.07□□□□□ -1.44
NR1D1-201ENST00000246672 M0QZ58 72 aa6.06□□□□□ -1.44
NR1D1-201ENST00000246672 LPAP08519 4548 aa6.01□□□□□ -1.45
NR1D1-201ENST00000246672 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
NR1D1-201ENST00000246672 RYR3Q15413 4870 aa5.99□□□□□ -1.45
NR1D1-201ENST00000246672 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
NR1D1-201ENST00000246672 Q5VSD8 79 aa5.93□□□□□ -1.46
NR1D1-201ENST00000246672 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
NR1D1-201ENST00000246672 LRP2P98164 4655 aa5.89□□□□□ -1.47
NR1D1-201ENST00000246672 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
NR1D1-201ENST00000246672 R4GN34 69 aa5.87□□□□□ -1.47
NR1D1-201ENST00000246672 MT1HL1P0DM35 61 aa5.82□□□□□ -1.48
NR1D1-201ENST00000246672 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
NR1D1-201ENST00000246672 RYR1P21817 5038 aa5.8□□□□□ -1.48
NR1D1-201ENST00000246672 LORP23490 312 aaPredicted RBP5.79□□□□□ -1.48
NR1D1-201ENST00000246672 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
NR1D1-201ENST00000246672 PP632Q6XCG6 107 aa5.7□□□□□ -1.5
NR1D1-201ENST00000246672 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
NR1D1-201ENST00000246672 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
NR1D1-201ENST00000246672 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
NR1D1-201ENST00000246672 KRTAP4-1Q9BYQ7 146 aa5.55□□□□□ -1.52
NR1D1-201ENST00000246672 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
NR1D1-201ENST00000246672 MUC2Q02817 5179 aa5.51□□□□□ -1.53
NR1D1-201ENST00000246672 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
NR1D1-201ENST00000246672 J3QL48 77 aa5.48□□□□□ -1.53
NR1D1-201ENST00000246672 HERC2O95714 4834 aa5.45□□□□□ -1.54
NR1D1-201ENST00000246672 KRTAP19-2Q3LHN2 52 aa5.45□□□□□ -1.54
NR1D1-201ENST00000246672 TNP1P09430 55 aa5.44□□□□□ -1.54
NR1D1-201ENST00000246672 KRTAP23-1A1A580 65 aa5.38□□□□□ -1.55
NR1D1-201ENST00000246672 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.55
NR1D1-201ENST00000246672 HERC1Q15751 4861 aa5.33□□□□□ -1.56
NR1D1-201ENST00000246672 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
NR1D1-201ENST00000246672 FLGP20930 4061 aaPredicted RBP5.27□□□□□ -1.57
NR1D1-201ENST00000246672 PCLOQ9Y6V0 5065 aa5.24□□□□□ -1.57
NR1D1-201ENST00000246672 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.58
NR1D1-201ENST00000246672 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
NR1D1-201ENST00000246672 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
NR1D1-201ENST00000246672 INE1O15225 51 aa5.12□□□□□ -1.59
NR1D1-201ENST00000246672 SPRR2GQ9BYE4 73 aa5.08□□□□□ -1.6
NR1D1-201ENST00000246672 KRTAP19-1Q8IUB9 90 aa5.08□□□□□ -1.6
NR1D1-201ENST00000246672 UBR4Q5T4S7 5183 aa5.05□□□□□ -1.6
NR1D1-201ENST00000246672 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
NR1D1-201ENST00000246672 LCE2CQ5TA81 110 aa5□□□□□ -1.61
NR1D1-201ENST00000246672 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
NR1D1-201ENST00000246672 M0R2T5 61 aa4.93□□□□□ -1.62
NR1D1-201ENST00000246672 MT1FP04733 61 aa4.88□□□□□ -1.63
NR1D1-201ENST00000246672 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
NR1D1-201ENST00000246672 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
NR1D1-201ENST00000246672 MT2AP02795 61 aa4.85□□□□□ -1.63
NR1D1-201ENST00000246672 KRTAP10-12P60413 245 aa4.85□□□□□ -1.63
NR1D1-201ENST00000246672 MT1HP80294 61 aa4.85□□□□□ -1.63
NR1D1-201ENST00000246672 KRTAP10-5P60370 271 aa4.82□□□□□ -1.64
NR1D1-201ENST00000246672 MT1XP80297 61 aa4.81□□□□□ -1.64
NR1D1-201ENST00000246672 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
NR1D1-201ENST00000246672 KRTAP9-8Q9BYQ0 159 aa4.78□□□□□ -1.64
NR1D1-201ENST00000246672 MT1BP07438 61 aa4.77□□□□□ -1.65
NR1D1-201ENST00000246672 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
NR1D1-201ENST00000246672 USH2AO75445 5202 aa4.61□□□□□ -1.67
NR1D1-201ENST00000246672 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
NR1D1-201ENST00000246672 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
NR1D1-201ENST00000246672 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
NR1D1-201ENST00000246672 KRTAP9-6A8MVA2 160 aa4.52□□□□□ -1.69
NR1D1-201ENST00000246672 KMT2DO14686 5537 aa4.49□□□□□ -1.69
NR1D1-201ENST00000246672 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
NR1D1-201ENST00000246672 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
NR1D1-201ENST00000246672 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
NR1D1-201ENST00000246672 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
NR1D1-201ENST00000246672 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.7
NR1D1-201ENST00000246672 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.7
NR1D1-201ENST00000246672 LCE2BO14633 110 aa4.36□□□□□ -1.71
NR1D1-201ENST00000246672 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
NR1D1-201ENST00000246672 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
NR1D1-201ENST00000246672 LCE2AQ5TA79 106 aaPredicted RBP4.18□□□□□ -1.74
NR1D1-201ENST00000246672 MT1LQ93083 61 aa4.17□□□□□ -1.74
NR1D1-201ENST00000246672 MT1EP04732 61 aa4.13□□□□□ -1.75
NR1D1-201ENST00000246672 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
NR1D1-201ENST00000246672 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
NR1D1-201ENST00000246672 KRTAP12-4P60329 112 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms