RNA–Protein interactions for RNA: ENST00000239223.3

DUSP1-201, Transcript of dual specificity phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP1, Length 2,019 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1-201ENST00000239223 UBR4Q5T4S7 5183 aa9.97□□□□□ -0.81
DUSP1-201ENST00000239223 SEC61BP60468 96 aaKnown RBP9.92□□□□□ -0.82
DUSP1-201ENST00000239223 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
DUSP1-201ENST00000239223 A6NED7 52 aa9.9□□□□□ -0.82
DUSP1-201ENST00000239223 RNF213Q63HN8 5207 aa9.87□□□□□ -0.83
DUSP1-201ENST00000239223 KRTAP3-1Q9BYR8 98 aa9.82□□□□□ -0.84
DUSP1-201ENST00000239223 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
DUSP1-201ENST00000239223 LCA10Q71F78 164 aa9.78□□□□□ -0.84
DUSP1-201ENST00000239223 A8MU10 97 aa9.73□□□□□ -0.85
DUSP1-201ENST00000239223 COX6B2Q6YFQ2 88 aa9.73□□□□□ -0.85
DUSP1-201ENST00000239223 PMAIP1Q13794 54 aa9.72□□□□□ -0.85
DUSP1-201ENST00000239223 A0A1B0GU69 56 aa9.72□□□□□ -0.85
DUSP1-201ENST00000239223 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
DUSP1-201ENST00000239223 FAT4Q6V0I7 4981 aa9.61□□□□□ -0.87
DUSP1-201ENST00000239223 RBM12B-AS1Q9P1G2 102 aa9.61□□□□□ -0.87
DUSP1-201ENST00000239223 KRTAP19-2Q3LHN2 52 aa9.6□□□□□ -0.87
DUSP1-201ENST00000239223 FLGP20930 4061 aaPredicted RBP9.59□□□□□ -0.87
DUSP1-201ENST00000239223 UQCR11O14957 56 aa9.55□□□□□ -0.88
DUSP1-201ENST00000239223 A6NN06 94 aa9.54□□□□□ -0.88
DUSP1-201ENST00000239223 SEC61GP60059 68 aa9.53□□□□□ -0.88
DUSP1-201ENST00000239223 SPATA8Q6RVD6 105 aa9.53□□□□□ -0.88
DUSP1-201ENST00000239223 H1FX-AS1Q4G0G2 97 aa9.52□□□□□ -0.89
DUSP1-201ENST00000239223 KTN1-AS1Q86SY8 53 aa9.49□□□□□ -0.89
DUSP1-201ENST00000239223 MIR22HGQ0VDD5 57 aa9.47□□□□□ -0.89
DUSP1-201ENST00000239223 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
DUSP1-201ENST00000239223 S4R3F8 94 aa9.45□□□□□ -0.9
DUSP1-201ENST00000239223 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
DUSP1-201ENST00000239223 A0A1B0GU33 70 aa9.22□□□□□ -0.93
DUSP1-201ENST00000239223 CSAG1Q6PB30 78 aa9.21□□□□□ -0.93
DUSP1-201ENST00000239223 MT1HP80294 61 aa9.21□□□□□ -0.94
DUSP1-201ENST00000239223 H0YAA0 97 aa9.14□□□□□ -0.95
DUSP1-201ENST00000239223 KRTAP3-2Q9BYR7 98 aa9.1□□□□□ -0.95
DUSP1-201ENST00000239223 M0R2T5 61 aa9.07□□□□□ -0.96
DUSP1-201ENST00000239223 KRTAP10-6P60371 365 aaPredicted RBP9.06□□□□□ -0.96
DUSP1-201ENST00000239223 P0C880 135 aa9.05□□□□□ -0.96
DUSP1-201ENST00000239223 ADM2Q7Z4H4 148 aa9.05□□□□□ -0.96
DUSP1-201ENST00000239223 K7ERS5 55 aa8.99□□□□□ -0.97
DUSP1-201ENST00000239223 PRAC1Q96KF2 57 aa8.98□□□□□ -0.97
DUSP1-201ENST00000239223 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
DUSP1-201ENST00000239223 LCE2AQ5TA79 106 aaPredicted RBP8.91□□□□□ -0.98
DUSP1-201ENST00000239223 KRTAP9-8Q9BYQ0 159 aa8.86□□□□□ -0.99
DUSP1-201ENST00000239223 KRTAP13-4Q3LI77 160 aa8.85□□□□□ -0.99
DUSP1-201ENST00000239223 MT2AP02795 61 aa8.83□□□□□ -1
DUSP1-201ENST00000239223 MT1FP04733 61 aa8.8□□□□□ -1
DUSP1-201ENST00000239223 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
DUSP1-201ENST00000239223 KRTAP10-10P60014 251 aa8.71□□□□□ -1.01
DUSP1-201ENST00000239223 M0QZ58 72 aa8.71□□□□□ -1.02
DUSP1-201ENST00000239223 A0A0D9SG42 100 aa8.7□□□□□ -1.02
DUSP1-201ENST00000239223 R4GN34 69 aa8.7□□□□□ -1.02
DUSP1-201ENST00000239223 ROMO1P60602 79 aa8.67□□□□□ -1.02
DUSP1-201ENST00000239223 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
DUSP1-201ENST00000239223 KRTAP19-1Q8IUB9 90 aa8.59□□□□□ -1.03
DUSP1-201ENST00000239223 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
DUSP1-201ENST00000239223 SPRR2GQ9BYE4 73 aa8.53□□□□□ -1.04
DUSP1-201ENST00000239223 KRTAP9-3Q9BYQ3 159 aa8.53□□□□□ -1.04
DUSP1-201ENST00000239223 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
DUSP1-201ENST00000239223 KRTAP12-2P59991 146 aa8.49□□□□□ -1.05
DUSP1-201ENST00000239223 SPINT4Q6UDR6 99 aa8.47□□□□□ -1.05
DUSP1-201ENST00000239223 USH2AO75445 5202 aa8.36□□□□□ -1.07
DUSP1-201ENST00000239223 LCE2BO14633 110 aa8.36□□□□□ -1.07
DUSP1-201ENST00000239223 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
DUSP1-201ENST00000239223 MT1BP07438 61 aa8.29□□□□□ -1.08
DUSP1-201ENST00000239223 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
DUSP1-201ENST00000239223 PLAC4Q8WY50 150 aa8.17□□□□□ -1.1
DUSP1-201ENST00000239223 FSIP2Q5CZC0 6907 aa8.17□□□□□ -1.1
DUSP1-201ENST00000239223 SSPOA2VEC9 5147 aa8.14□□□□□ -1.11
DUSP1-201ENST00000239223 CAMK2N1Q7Z7J9 78 aa8.13□□□□□ -1.11
DUSP1-201ENST00000239223 LCE2DQ5TA82 110 aaPredicted RBP8.04□□□□□ -1.12
DUSP1-201ENST00000239223 MT1XP80297 61 aa8□□□□□ -1.13
DUSP1-201ENST00000239223 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
DUSP1-201ENST00000239223 KRTAP9-2Q9BYQ4 174 aa7.88□□□□□ -1.15
DUSP1-201ENST00000239223 PP632Q6XCG6 107 aa7.84□□□□□ -1.15
DUSP1-201ENST00000239223 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
DUSP1-201ENST00000239223 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
DUSP1-201ENST00000239223 PRO2289Q9P1D8 64 aa7.77□□□□□ -1.17
DUSP1-201ENST00000239223 FCGBPQ9Y6R7 5405 aaPredicted RBP7.76□□□□□ -1.17
DUSP1-201ENST00000239223 KMT2DO14686 5537 aa7.71□□□□□ -1.18
DUSP1-201ENST00000239223 KRTAP10-7P60409 375 aaPredicted RBP7.71□□□□□ -1.18
DUSP1-201ENST00000239223 TNP1P09430 55 aa7.69□□□□□ -1.18
DUSP1-201ENST00000239223 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
DUSP1-201ENST00000239223 H3BS24 57 aa7.64□□□□□ -1.19
DUSP1-201ENST00000239223 CRCT1Q9UGL9 99 aa7.55□□□□□ -1.2
DUSP1-201ENST00000239223 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
DUSP1-201ENST00000239223 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
DUSP1-201ENST00000239223 LCE3AQ5TA76 89 aa7.5□□□□□ -1.21
DUSP1-201ENST00000239223 KRTAP4-8A0A0G2JLE6 195 aa7.47□□□□□ -1.21
DUSP1-201ENST00000239223 KRTAP4-8Q9BYQ9 185 aa7.47□□□□□ -1.21
DUSP1-201ENST00000239223 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
DUSP1-201ENST00000239223 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
DUSP1-201ENST00000239223 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
DUSP1-201ENST00000239223 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
DUSP1-201ENST00000239223 SYNE2Q8WXH0 6885 aaKnown RBP7.24□□□□□ -1.25
DUSP1-201ENST00000239223 KRTAP19-5Q3LI72 72 aa7.2□□□□□ -1.26
DUSP1-201ENST00000239223 MUC12Q9UKN1 5478 aa7.16□□□□□ -1.26
DUSP1-201ENST00000239223 KRTAP12-3P60328 96 aa7.15□□□□□ -1.27
DUSP1-201ENST00000239223 SPRR5A0A1B0GTR4 108 aa7.14□□□□□ -1.27
DUSP1-201ENST00000239223 KRTAP19-7Q3SYF9 63 aa7.14□□□□□ -1.27
DUSP1-201ENST00000239223 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.01□□□□□ -1.29
DUSP1-201ENST00000239223 MT1EP04732 61 aa7□□□□□ -1.29
DUSP1-201ENST00000239223 MDN1Q9NU22 5596 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms