RNA–Protein interactions for RNA: ENST00000229195.7

CNOT2-201, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT2, Length 3,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-201ENST00000229195 C9orf92A6NGG3 77 aa6□□□□□ -1.45
CNOT2-201ENST00000229195 KRTAP10-8P60410 259 aa5.99□□□□□ -1.45
CNOT2-201ENST00000229195 IGKV2D-30A0A075B6S6 120 aa5.96□□□□□ -1.46
CNOT2-201ENST00000229195 BIRC6Q9NR09 4857 aa5.96□□□□□ -1.46
CNOT2-201ENST00000229195 HERC2O95714 4834 aa5.95□□□□□ -1.46
CNOT2-201ENST00000229195 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
CNOT2-201ENST00000229195 RPS29P62273 56 aaKnown RBP5.93□□□□□ -1.46
CNOT2-201ENST00000229195 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
CNOT2-201ENST00000229195 A8MUU9 505 aa5.86□□□□□ -1.47
CNOT2-201ENST00000229195 KRTAP25-1Q3LHN0 102 aa5.86□□□□□ -1.47
CNOT2-201ENST00000229195 LPAP08519 4548 aa5.85□□□□□ -1.47
CNOT2-201ENST00000229195 H0YAA0 97 aa5.84□□□□□ -1.47
CNOT2-201ENST00000229195 ROMO1P60602 79 aa5.82□□□□□ -1.48
CNOT2-201ENST00000229195 PCLOQ9Y6V0 5065 aa5.81□□□□□ -1.48
CNOT2-201ENST00000229195 LRP2P98164 4655 aa5.8□□□□□ -1.48
CNOT2-201ENST00000229195 A0A1B0GU33 70 aa5.77□□□□□ -1.49
CNOT2-201ENST00000229195 HERC1Q15751 4861 aa5.76□□□□□ -1.49
CNOT2-201ENST00000229195 C20orf166-AS1Q96NR2 134 aa5.75□□□□□ -1.49
CNOT2-201ENST00000229195 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
CNOT2-201ENST00000229195 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
CNOT2-201ENST00000229195 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
CNOT2-201ENST00000229195 XP32Q5T750 250 aa5.73□□□□□ -1.49
CNOT2-201ENST00000229195 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
CNOT2-201ENST00000229195 P0C880 135 aa5.67□□□□□ -1.5
CNOT2-201ENST00000229195 K7ERS5 55 aa5.66□□□□□ -1.5
CNOT2-201ENST00000229195 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
CNOT2-201ENST00000229195 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.51
CNOT2-201ENST00000229195 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
CNOT2-201ENST00000229195 COX6B2Q6YFQ2 88 aa5.61□□□□□ -1.51
CNOT2-201ENST00000229195 MUC2Q02817 5179 aa5.56□□□□□ -1.52
CNOT2-201ENST00000229195 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
CNOT2-201ENST00000229195 HMCN2Q8NDA2 5059 aa5.54□□□□□ -1.52
CNOT2-201ENST00000229195 LCE2DQ5TA82 110 aaPredicted RBP5.53□□□□□ -1.52
CNOT2-201ENST00000229195 A0A0D9SG42 100 aa5.48□□□□□ -1.53
CNOT2-201ENST00000229195 KRTAP4-1Q9BYQ7 146 aa5.47□□□□□ -1.53
CNOT2-201ENST00000229195 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
CNOT2-201ENST00000229195 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
CNOT2-201ENST00000229195 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
CNOT2-201ENST00000229195 MUC17Q685J3 4493 aa5.45□□□□□ -1.54
CNOT2-201ENST00000229195 NDUFAF8A1L188 74 aa5.44□□□□□ -1.54
CNOT2-201ENST00000229195 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
CNOT2-201ENST00000229195 KRTAP15-1Q3LI76 137 aa5.42□□□□□ -1.54
CNOT2-201ENST00000229195 UBR4Q5T4S7 5183 aa5.41□□□□□ -1.54
CNOT2-201ENST00000229195 RNF213Q63HN8 5207 aa5.41□□□□□ -1.54
CNOT2-201ENST00000229195 S4R3F8 94 aa5.34□□□□□ -1.55
CNOT2-201ENST00000229195 FAT4Q6V0I7 4981 aa5.33□□□□□ -1.56
CNOT2-201ENST00000229195 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
CNOT2-201ENST00000229195 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
CNOT2-201ENST00000229195 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
CNOT2-201ENST00000229195 FLGP20930 4061 aaPredicted RBP5.17□□□□□ -1.58
CNOT2-201ENST00000229195 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
CNOT2-201ENST00000229195 M0QZ58 72 aa5.1□□□□□ -1.59
CNOT2-201ENST00000229195 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
CNOT2-201ENST00000229195 M0R2T5 61 aa5.05□□□□□ -1.6
CNOT2-201ENST00000229195 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
CNOT2-201ENST00000229195 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
CNOT2-201ENST00000229195 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
CNOT2-201ENST00000229195 LCE2BO14633 110 aa5.03□□□□□ -1.6
CNOT2-201ENST00000229195 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
CNOT2-201ENST00000229195 MT1HP80294 61 aa5.01□□□□□ -1.61
CNOT2-201ENST00000229195 R4GN34 69 aa4.94□□□□□ -1.62
CNOT2-201ENST00000229195 MT2AP02795 61 aa4.84□□□□□ -1.64
CNOT2-201ENST00000229195 MT1FP04733 61 aa4.84□□□□□ -1.64
CNOT2-201ENST00000229195 KRTAP10-10P60014 251 aa4.83□□□□□ -1.64
CNOT2-201ENST00000229195 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
CNOT2-201ENST00000229195 PP632Q6XCG6 107 aa4.81□□□□□ -1.64
CNOT2-201ENST00000229195 KRTAP19-1Q8IUB9 90 aa4.74□□□□□ -1.65
CNOT2-201ENST00000229195 CAMK2N1Q7Z7J9 78 aa4.74□□□□□ -1.65
CNOT2-201ENST00000229195 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
CNOT2-201ENST00000229195 USH2AO75445 5202 aa4.67□□□□□ -1.66
CNOT2-201ENST00000229195 KRTAP9-3Q9BYQ3 159 aa4.63□□□□□ -1.67
CNOT2-201ENST00000229195 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
CNOT2-201ENST00000229195 FSIP2Q5CZC0 6907 aa4.59□□□□□ -1.67
CNOT2-201ENST00000229195 TNP1P09430 55 aa4.59□□□□□ -1.68
CNOT2-201ENST00000229195 MT1BP07438 61 aa4.55□□□□□ -1.68
CNOT2-201ENST00000229195 KRTAP19-8Q3LI54 63 aa4.53□□□□□ -1.68
CNOT2-201ENST00000229195 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
CNOT2-201ENST00000229195 MT1XP80297 61 aa4.42□□□□□ -1.7
CNOT2-201ENST00000229195 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
CNOT2-201ENST00000229195 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
CNOT2-201ENST00000229195 KMT2DO14686 5537 aa4.36□□□□□ -1.71
CNOT2-201ENST00000229195 INE1O15225 51 aa4.31□□□□□ -1.72
CNOT2-201ENST00000229195 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
CNOT2-201ENST00000229195 LCE3AQ5TA76 89 aa4.31□□□□□ -1.72
CNOT2-201ENST00000229195 KRTAP10-12P60413 245 aa4.2□□□□□ -1.74
CNOT2-201ENST00000229195 KRTAP4-8A0A0G2JLE6 195 aa4.19□□□□□ -1.74
CNOT2-201ENST00000229195 KRTAP4-8Q9BYQ9 185 aa4.19□□□□□ -1.74
CNOT2-201ENST00000229195 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
CNOT2-201ENST00000229195 KRTAP8-1Q8IUC2 63 aa4.18□□□□□ -1.74
CNOT2-201ENST00000229195 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
CNOT2-201ENST00000229195 KRTAP9-2Q9BYQ4 174 aa4.15□□□□□ -1.75
CNOT2-201ENST00000229195 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
CNOT2-201ENST00000229195 KRTAP19-5Q3LI72 72 aa4.04□□□□□ -1.76
CNOT2-201ENST00000229195 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
CNOT2-201ENST00000229195 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
CNOT2-201ENST00000229195 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
CNOT2-201ENST00000229195 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
CNOT2-201ENST00000229195 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
CNOT2-201ENST00000229195 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
CNOT2-201ENST00000229195 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms