RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 Q5VSD8 79 aa9.33□□□□□ -0.92
PRPF19-201ENST00000227524 HERC2O95714 4834 aa9.32□□□□□ -0.92
PRPF19-201ENST00000227524 H1FX-AS1Q4G0G2 97 aa9.3□□□□□ -0.92
PRPF19-201ENST00000227524 FAT3Q8TDW7 4589 aa9.28□□□□□ -0.92
PRPF19-201ENST00000227524 FLG2Q5D862 2391 aaPredicted RBP9.25□□□□□ -0.93
PRPF19-201ENST00000227524 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
PRPF19-201ENST00000227524 COX6B2Q6YFQ2 88 aa9.22□□□□□ -0.93
PRPF19-201ENST00000227524 KRTAP10-8P60410 259 aa9.2□□□□□ -0.94
PRPF19-201ENST00000227524 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
PRPF19-201ENST00000227524 DMBT1Q9UGM3 2413 aaPredicted RBP9.1□□□□□ -0.95
PRPF19-201ENST00000227524 KRTAP4-5Q9BYR2 181 aa9.07□□□□□ -0.96
PRPF19-201ENST00000227524 K7ERS5 55 aa9.07□□□□□ -0.96
PRPF19-201ENST00000227524 MT1HL1P0DM35 61 aa9.06□□□□□ -0.96
PRPF19-201ENST00000227524 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
PRPF19-201ENST00000227524 ABCA13Q86UQ4 5058 aa9.03□□□□□ -0.96
PRPF19-201ENST00000227524 KRTAP3-3Q9BYR6 98 aa9□□□□□ -0.97
PRPF19-201ENST00000227524 KRTAP10-6P60371 365 aaPredicted RBP8.99□□□□□ -0.97
PRPF19-201ENST00000227524 RPL37P61927 97 aaKnown RBP8.95□□□□□ -0.98
PRPF19-201ENST00000227524 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
PRPF19-201ENST00000227524 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
PRPF19-201ENST00000227524 KRTAP3-2Q9BYR7 98 aa8.92□□□□□ -0.98
PRPF19-201ENST00000227524 ROMO1P60602 79 aa8.91□□□□□ -0.98
PRPF19-201ENST00000227524 S4R3F8 94 aa8.89□□□□□ -0.99
PRPF19-201ENST00000227524 XP32Q5T750 250 aa8.88□□□□□ -0.99
PRPF19-201ENST00000227524 A0A0D9SG42 100 aa8.86□□□□□ -0.99
PRPF19-201ENST00000227524 H3BS24 57 aa8.82□□□□□ -1
PRPF19-201ENST00000227524 P0C880 135 aa8.78□□□□□ -1
PRPF19-201ENST00000227524 LRP2P98164 4655 aa8.73□□□□□ -1.01
PRPF19-201ENST00000227524 LPAP08519 4548 aa8.73□□□□□ -1.01
PRPF19-201ENST00000227524 J3QL48 77 aa8.72□□□□□ -1.01
PRPF19-201ENST00000227524 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
PRPF19-201ENST00000227524 KRTAP12-2P59991 146 aa8.65□□□□□ -1.03
PRPF19-201ENST00000227524 C10orf95Q9H7T3 257 aa8.61□□□□□ -1.03
PRPF19-201ENST00000227524 HERC1Q15751 4861 aa8.6□□□□□ -1.03
PRPF19-201ENST00000227524 KRTAP12-1P59990 96 aa8.58□□□□□ -1.04
PRPF19-201ENST00000227524 SPINT4Q6UDR6 99 aa8.54□□□□□ -1.04
PRPF19-201ENST00000227524 M0QZ58 72 aa8.49□□□□□ -1.05
PRPF19-201ENST00000227524 KRTAP15-1Q3LI76 137 aa8.38□□□□□ -1.07
PRPF19-201ENST00000227524 HMCN2Q8NDA2 5059 aa8.37□□□□□ -1.07
PRPF19-201ENST00000227524 MUC17Q685J3 4493 aa8.36□□□□□ -1.07
PRPF19-201ENST00000227524 SEC61BP60468 96 aaKnown RBP8.29□□□□□ -1.08
PRPF19-201ENST00000227524 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
PRPF19-201ENST00000227524 R4GN34 69 aa8.24□□□□□ -1.09
PRPF19-201ENST00000227524 MUC2Q02817 5179 aa8.23□□□□□ -1.09
PRPF19-201ENST00000227524 NDUFAF8A1L188 74 aa8.21□□□□□ -1.1
PRPF19-201ENST00000227524 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
PRPF19-201ENST00000227524 KRTAP19-2Q3LHN2 52 aa8.11□□□□□ -1.11
PRPF19-201ENST00000227524 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
PRPF19-201ENST00000227524 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
PRPF19-201ENST00000227524 PLAC4Q8WY50 150 aa7.93□□□□□ -1.14
PRPF19-201ENST00000227524 RNF213Q63HN8 5207 aa7.92□□□□□ -1.14
PRPF19-201ENST00000227524 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
PRPF19-201ENST00000227524 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
PRPF19-201ENST00000227524 PP632Q6XCG6 107 aa7.82□□□□□ -1.16
PRPF19-201ENST00000227524 LCE2CQ5TA81 110 aa7.81□□□□□ -1.16
PRPF19-201ENST00000227524 MT1HP80294 61 aa7.61□□□□□ -1.19
PRPF19-201ENST00000227524 TNP1P09430 55 aa7.58□□□□□ -1.2
PRPF19-201ENST00000227524 LUZP6Q538Z0 58 aa7.58□□□□□ -1.2
PRPF19-201ENST00000227524 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
PRPF19-201ENST00000227524 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
PRPF19-201ENST00000227524 M0R2T5 61 aa7.47□□□□□ -1.21
PRPF19-201ENST00000227524 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
PRPF19-201ENST00000227524 KRTAP9-8Q9BYQ0 159 aa7.37□□□□□ -1.23
PRPF19-201ENST00000227524 SPRR2GQ9BYE4 73 aa7.37□□□□□ -1.23
PRPF19-201ENST00000227524 MT2AP02795 61 aa7.36□□□□□ -1.23
PRPF19-201ENST00000227524 MT1FP04733 61 aa7.34□□□□□ -1.23
PRPF19-201ENST00000227524 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
PRPF19-201ENST00000227524 A0A0A0MQY5 61 aa7.3□□□□□ -1.24
PRPF19-201ENST00000227524 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
PRPF19-201ENST00000227524 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
PRPF19-201ENST00000227524 KRTAP9-2Q9BYQ4 174 aa7.17□□□□□ -1.26
PRPF19-201ENST00000227524 KRTAP9-3Q9BYQ3 159 aa7.09□□□□□ -1.27
PRPF19-201ENST00000227524 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
PRPF19-201ENST00000227524 LCE2DQ5TA82 110 aaPredicted RBP7.06□□□□□ -1.28
PRPF19-201ENST00000227524 MT1BP07438 61 aa6.99□□□□□ -1.29
PRPF19-201ENST00000227524 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
PRPF19-201ENST00000227524 KRTAP10-5P60370 271 aa6.93□□□□□ -1.3
PRPF19-201ENST00000227524 MT1XP80297 61 aa6.92□□□□□ -1.3
PRPF19-201ENST00000227524 KRTAP9-6A0A140TA67 174 aa6.89□□□□□ -1.31
PRPF19-201ENST00000227524 LCE2BO14633 110 aa6.89□□□□□ -1.31
PRPF19-201ENST00000227524 KRTAP10-12P60413 245 aa6.84□□□□□ -1.32
PRPF19-201ENST00000227524 USH2AO75445 5202 aa6.82□□□□□ -1.32
PRPF19-201ENST00000227524 KRTAP12-3P60328 96 aa6.81□□□□□ -1.32
PRPF19-201ENST00000227524 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
PRPF19-201ENST00000227524 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
PRPF19-201ENST00000227524 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
PRPF19-201ENST00000227524 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
PRPF19-201ENST00000227524 INE1O15225 51 aa6.61□□□□□ -1.35
PRPF19-201ENST00000227524 SSPOA2VEC9 5147 aa6.54□□□□□ -1.36
PRPF19-201ENST00000227524 KRTAP19-5Q3LI72 72 aa6.48□□□□□ -1.37
PRPF19-201ENST00000227524 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
PRPF19-201ENST00000227524 KMT2DO14686 5537 aa6.42□□□□□ -1.38
PRPF19-201ENST00000227524 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
PRPF19-201ENST00000227524 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
PRPF19-201ENST00000227524 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
PRPF19-201ENST00000227524 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
PRPF19-201ENST00000227524 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
PRPF19-201ENST00000227524 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
PRPF19-201ENST00000227524 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.41
PRPF19-201ENST00000227524 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms