RNA–Protein interactions for RNA: ENST00000222725.9

LFNG-201, Transcript of LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase, humanhuman

APPRIS P4 TSL 5 BASIC

Gene LFNG, Length 2,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LFNG-201ENST00000222725 RYR1P21817 5038 aa14.18□□□□□ -0.14
LFNG-201ENST00000222725 DMBT1Q9UGM3 2413 aaPredicted RBP14.17□□□□□ -0.14
LFNG-201ENST00000222725 RYR3Q15413 4870 aa14.08□□□□□ -0.15
LFNG-201ENST00000222725 KRTAP3-3Q9BYR6 98 aa14.05□□□□□ -0.16
LFNG-201ENST00000222725 MYCBP2O75592 4640 aa14.04□□□□□ -0.16
LFNG-201ENST00000222725 KRTAP17-1Q9BYP8 105 aa14.03□□□□□ -0.16
LFNG-201ENST00000222725 MT1HL1P0DM35 61 aa14.01□□□□□ -0.17
LFNG-201ENST00000222725 CSAG1Q6PB30 78 aa13.97□□□□□ -0.17
LFNG-201ENST00000222725 S4R3F8 94 aa13.96□□□□□ -0.17
LFNG-201ENST00000222725 KRTAP10-6P60371 365 aaPredicted RBP13.93□□□□□ -0.18
LFNG-201ENST00000222725 LINC01554Q52M75 96 aa13.91□□□□□ -0.18
LFNG-201ENST00000222725 KIAA1109Q2LD37 5005 aa13.9□□□□□ -0.18
LFNG-201ENST00000222725 K7ERS5 55 aa13.9□□□□□ -0.18
LFNG-201ENST00000222725 KRTAP3-2Q9BYR7 98 aa13.83□□□□□ -0.2
LFNG-201ENST00000222725 TPRXLQ17RH7 258 aa13.76□□□□□ -0.21
LFNG-201ENST00000222725 KRTAP13-4Q3LI77 160 aa13.73□□□□□ -0.21
LFNG-201ENST00000222725 KRTAP25-1Q3LHN0 102 aa13.66□□□□□ -0.22
LFNG-201ENST00000222725 P0C880 135 aa13.63□□□□□ -0.23
LFNG-201ENST00000222725 LPAP08519 4548 aa13.61□□□□□ -0.23
LFNG-201ENST00000222725 LRP2P98164 4655 aa13.61□□□□□ -0.23
LFNG-201ENST00000222725 A0A0D9SG42 100 aa13.59□□□□□ -0.23
LFNG-201ENST00000222725 EPPK1P58107 5090 aaKnown RBP13.55□□□□□ -0.24
LFNG-201ENST00000222725 ROMO1P60602 79 aa13.54□□□□□ -0.24
LFNG-201ENST00000222725 ABCA13Q86UQ4 5058 aa13.37□□□□□ -0.27
LFNG-201ENST00000222725 CRIPTQ9P021 101 aa13.36□□□□□ -0.27
LFNG-201ENST00000222725 KRTAP4-5Q9BYR2 181 aa13.33□□□□□ -0.28
LFNG-201ENST00000222725 M0QZ58 72 aa13.3□□□□□ -0.28
LFNG-201ENST00000222725 KRTAP12-2P59991 146 aa13.29□□□□□ -0.28
LFNG-201ENST00000222725 KRTAP12-1P59990 96 aa13.23□□□□□ -0.29
LFNG-201ENST00000222725 SEC61BP60468 96 aaKnown RBP13.23□□□□□ -0.29
LFNG-201ENST00000222725 SPINT4Q6UDR6 99 aa13.16□□□□□ -0.3
LFNG-201ENST00000222725 MUC17Q685J3 4493 aa13.08□□□□□ -0.32
LFNG-201ENST00000222725 J3QL48 77 aa13.01□□□□□ -0.33
LFNG-201ENST00000222725 C10orf95Q9H7T3 257 aa12.96□□□□□ -0.33
LFNG-201ENST00000222725 KRTAP4-1Q9BYQ7 146 aa12.95□□□□□ -0.34
LFNG-201ENST00000222725 R4GN34 69 aa12.95□□□□□ -0.34
LFNG-201ENST00000222725 HERC2O95714 4834 aa12.88□□□□□ -0.35
LFNG-201ENST00000222725 KRTAP19-2Q3LHN2 52 aa12.78□□□□□ -0.36
LFNG-201ENST00000222725 LORP23490 312 aaPredicted RBP12.73□□□□□ -0.37
LFNG-201ENST00000222725 BIRC6Q9NR09 4857 aa12.52□□□□□ -0.41
LFNG-201ENST00000222725 FLGP20930 4061 aaPredicted RBP12.47□□□□□ -0.41
LFNG-201ENST00000222725 H3BS24 57 aa12.43□□□□□ -0.42
LFNG-201ENST00000222725 MUC2Q02817 5179 aa12.42□□□□□ -0.42
LFNG-201ENST00000222725 KRTAP15-1Q3LI76 137 aa12.42□□□□□ -0.42
LFNG-201ENST00000222725 CAMK2N1Q7Z7J9 78 aa12.27□□□□□ -0.45
LFNG-201ENST00000222725 HMCN2Q8NDA2 5059 aa12.21□□□□□ -0.46
LFNG-201ENST00000222725 HERC1Q15751 4861 aa12.19□□□□□ -0.46
LFNG-201ENST00000222725 PCLOQ9Y6V0 5065 aa12.1□□□□□ -0.47
LFNG-201ENST00000222725 PP632Q6XCG6 107 aa12.09□□□□□ -0.47
LFNG-201ENST00000222725 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
LFNG-201ENST00000222725 NDUFAF8A1L188 74 aa12.01□□□□□ -0.49
LFNG-201ENST00000222725 PLAC4Q8WY50 150 aa11.96□□□□□ -0.5
LFNG-201ENST00000222725 FAT4Q6V0I7 4981 aa11.86□□□□□ -0.51
LFNG-201ENST00000222725 TNP1P09430 55 aa11.83□□□□□ -0.52
LFNG-201ENST00000222725 SPRR2GQ9BYE4 73 aa11.82□□□□□ -0.52
LFNG-201ENST00000222725 KRTAP23-1A1A580 65 aa11.75□□□□□ -0.53
LFNG-201ENST00000222725 M0R2T5 61 aa11.73□□□□□ -0.53
LFNG-201ENST00000222725 KRTAP19-1Q8IUB9 90 aa11.72□□□□□ -0.53
LFNG-201ENST00000222725 MT1HP80294 61 aa11.71□□□□□ -0.54
LFNG-201ENST00000222725 RNF213Q63HN8 5207 aa11.64□□□□□ -0.55
LFNG-201ENST00000222725 UBR4Q5T4S7 5183 aa11.58□□□□□ -0.56
LFNG-201ENST00000222725 MT2AP02795 61 aa11.51□□□□□ -0.57
LFNG-201ENST00000222725 MT1FP04733 61 aa11.5□□□□□ -0.57
LFNG-201ENST00000222725 KRTAP10-10P60014 251 aa11.48□□□□□ -0.57
LFNG-201ENST00000222725 KRTAP9-8Q9BYQ0 159 aa11.44□□□□□ -0.58
LFNG-201ENST00000222725 LUZP6Q538Z0 58 aa11.39□□□□□ -0.59
LFNG-201ENST00000222725 KRTAP19-8Q3LI54 63 aa11.31□□□□□ -0.6
LFNG-201ENST00000222725 SPRR5A0A1B0GTR4 108 aa11.21□□□□□ -0.62
LFNG-201ENST00000222725 LCE3AQ5TA76 89 aa11.17□□□□□ -0.62
LFNG-201ENST00000222725 MT1BP07438 61 aa11.12□□□□□ -0.63
LFNG-201ENST00000222725 KRTAP10-5P60370 271 aa11.04□□□□□ -0.64
LFNG-201ENST00000222725 MT1XP80297 61 aa11.02□□□□□ -0.65
LFNG-201ENST00000222725 KRTAP9-3Q9BYQ3 159 aa10.97□□□□□ -0.65
LFNG-201ENST00000222725 KRTAP8-1Q8IUC2 63 aa10.96□□□□□ -0.65
LFNG-201ENST00000222725 KRTAP10-12P60413 245 aa10.81□□□□□ -0.68
LFNG-201ENST00000222725 A0A0A0MQY5 61 aa10.73□□□□□ -0.69
LFNG-201ENST00000222725 PRO2289Q9P1D8 64 aa10.7□□□□□ -0.7
LFNG-201ENST00000222725 KRTAP12-3P60328 96 aa10.68□□□□□ -0.7
LFNG-201ENST00000222725 KRTAP10-7P60409 375 aaPredicted RBP10.68□□□□□ -0.7
LFNG-201ENST00000222725 LCE2BO14633 110 aa10.51□□□□□ -0.73
LFNG-201ENST00000222725 LCE2AQ5TA79 106 aaPredicted RBP10.41□□□□□ -0.74
LFNG-201ENST00000222725 KRTAP19-5Q3LI72 72 aa10.23□□□□□ -0.77
LFNG-201ENST00000222725 USH2AO75445 5202 aa10.21□□□□□ -0.77
LFNG-201ENST00000222725 LCE3CQ5T5A8 94 aa10.05□□□□□ -0.8
LFNG-201ENST00000222725 KMT2DO14686 5537 aa10□□□□□ -0.81
LFNG-201ENST00000222725 KRTAP4-8A0A0G2JLE6 195 aa9.99□□□□□ -0.81
LFNG-201ENST00000222725 KRTAP4-8Q9BYQ9 185 aa9.99□□□□□ -0.81
LFNG-201ENST00000222725 KRTAP19-7Q3SYF9 63 aa9.83□□□□□ -0.84
LFNG-201ENST00000222725 INE1O15225 51 aa9.79□□□□□ -0.84
LFNG-201ENST00000222725 KRTAP19-4Q3LI73 84 aa9.68□□□□□ -0.86
LFNG-201ENST00000222725 SSPOA2VEC9 5147 aa9.67□□□□□ -0.86
LFNG-201ENST00000222725 KRTAP9-6A8MVA2 160 aa9.62□□□□□ -0.87
LFNG-201ENST00000222725 MT1EP04732 61 aa9.56□□□□□ -0.88
LFNG-201ENST00000222725 MT1LQ93083 61 aa9.54□□□□□ -0.88
LFNG-201ENST00000222725 KRTAP19-6Q3LI70 58 aa9.52□□□□□ -0.89
LFNG-201ENST00000222725 KRTAP4-7Q9BYR0 210 aa9.5□□□□□ -0.89
LFNG-201ENST00000222725 KRTAP2-3P0C7H8 128 aa9.32□□□□□ -0.92
LFNG-201ENST00000222725 KRTAP2-4Q9BYR9 128 aa9.32□□□□□ -0.92
LFNG-201ENST00000222725 KRTAP2-1Q9BYU5 128 aa9.32□□□□□ -0.92
LFNG-201ENST00000222725 FSIP2Q5CZC0 6907 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms