RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
SIPA1L3-201ENST00000222345 HUWE1Q7Z6Z7 4374 aaKnown RBP5.64□□□□□ -1.51
SIPA1L3-201ENST00000222345 ZNF469Q96JG9 3925 aaPredicted RBP5.54□□□□□ -1.52
SIPA1L3-201ENST00000222345 LORP23490 312 aaPredicted RBP5.53□□□□□ -1.52
SIPA1L3-201ENST00000222345 KRTAP8-1Q8IUC2 63 aa5.53□□□□□ -1.52
SIPA1L3-201ENST00000222345 KRTAP10-4P60372 401 aaPredicted RBP5.45□□□□□ -1.54
SIPA1L3-201ENST00000222345 KRTAP19-4Q3LI73 84 aa5.45□□□□□ -1.54
SIPA1L3-201ENST00000222345 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
SIPA1L3-201ENST00000222345 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
SIPA1L3-201ENST00000222345 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
SIPA1L3-201ENST00000222345 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
SIPA1L3-201ENST00000222345 LCE3CQ5T5A8 94 aa5.32□□□□□ -1.56
SIPA1L3-201ENST00000222345 SPRR2GQ9BYE4 73 aa5.28□□□□□ -1.56
SIPA1L3-201ENST00000222345 DNAH6Q9C0G6 4158 aa5.24□□□□□ -1.57
SIPA1L3-201ENST00000222345 DNAH7Q8WXX0 4024 aa5.23□□□□□ -1.57
SIPA1L3-201ENST00000222345 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
SIPA1L3-201ENST00000222345 LYSTQ99698 3801 aa5.17□□□□□ -1.58
SIPA1L3-201ENST00000222345 MT1HP80294 61 aa5.17□□□□□ -1.58
SIPA1L3-201ENST00000222345 FRAS1Q86XX4 4008 aa5.16□□□□□ -1.58
SIPA1L3-201ENST00000222345 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.58
SIPA1L3-201ENST00000222345 DNAH9Q9NYC9 4486 aa5.14□□□□□ -1.59
SIPA1L3-201ENST00000222345 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
SIPA1L3-201ENST00000222345 VPS13BQ7Z7G8 4022 aa5.12□□□□□ -1.59
SIPA1L3-201ENST00000222345 HECTD4Q9Y4D8 3996 aa5.11□□□□□ -1.59
SIPA1L3-201ENST00000222345 ANK2Q01484 3957 aa5.11□□□□□ -1.59
SIPA1L3-201ENST00000222345 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
SIPA1L3-201ENST00000222345 DNAH8Q96JB1 4490 aa5.06□□□□□ -1.6
SIPA1L3-201ENST00000222345 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
SIPA1L3-201ENST00000222345 KMT2AQ03164 3969 aa5.05□□□□□ -1.6
SIPA1L3-201ENST00000222345 MT2AP02795 61 aa5.01□□□□□ -1.61
SIPA1L3-201ENST00000222345 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
SIPA1L3-201ENST00000222345 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
SIPA1L3-201ENST00000222345 SPRR2EP22531 72 aa4.93□□□□□ -1.62
SIPA1L3-201ENST00000222345 SPRR2BP35325 72 aa4.93□□□□□ -1.62
SIPA1L3-201ENST00000222345 SPRR2AP35326 72 aa4.93□□□□□ -1.62
SIPA1L3-201ENST00000222345 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
SIPA1L3-201ENST00000222345 DNAH11Q96DT5 4516 aa4.92□□□□□ -1.62
SIPA1L3-201ENST00000222345 MT1FP04733 61 aa4.91□□□□□ -1.62
SIPA1L3-201ENST00000222345 DYNC2H1Q8NCM8 4307 aaKnown RBP4.82□□□□□ -1.64
SIPA1L3-201ENST00000222345 DNAH5Q8TE73 4624 aa4.82□□□□□ -1.64
SIPA1L3-201ENST00000222345 VPS13DQ5THJ4 4388 aa4.81□□□□□ -1.64
SIPA1L3-201ENST00000222345 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
SIPA1L3-201ENST00000222345 LCE3BQ5TA77 95 aa4.8□□□□□ -1.64
SIPA1L3-201ENST00000222345 PRKDCP78527 4128 aaKnown RBP4.78□□□□□ -1.64
SIPA1L3-201ENST00000222345 DNAH17Q9UFH2 4485 aa4.78□□□□□ -1.64
SIPA1L3-201ENST00000222345 SPRR2DP22532 72 aa4.76□□□□□ -1.65
SIPA1L3-201ENST00000222345 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
SIPA1L3-201ENST00000222345 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
SIPA1L3-201ENST00000222345 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
SIPA1L3-201ENST00000222345 STARD9Q9P2P6 4700 aa4.69□□□□□ -1.66
SIPA1L3-201ENST00000222345 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
SIPA1L3-201ENST00000222345 LRP1BQ9NZR2 4599 aa4.67□□□□□ -1.66
SIPA1L3-201ENST00000222345 LCE2BO14633 110 aa4.67□□□□□ -1.66
SIPA1L3-201ENST00000222345 MT1GP13640 62 aa4.63□□□□□ -1.67
SIPA1L3-201ENST00000222345 KRTAP19-1Q8IUB9 90 aa4.62□□□□□ -1.67
SIPA1L3-201ENST00000222345 MT1XP80297 61 aa4.62□□□□□ -1.67
SIPA1L3-201ENST00000222345 MT3P25713 68 aa4.58□□□□□ -1.68
SIPA1L3-201ENST00000222345 FAT1Q14517 4588 aa4.55□□□□□ -1.68
SIPA1L3-201ENST00000222345 LRP1Q07954 4544 aaKnown RBP4.53□□□□□ -1.68
SIPA1L3-201ENST00000222345 DYNC1H1Q14204 4646 aaKnown RBP4.5□□□□□ -1.69
SIPA1L3-201ENST00000222345 SACSQ9NZJ4 4579 aa4.5□□□□□ -1.69
SIPA1L3-201ENST00000222345 MT1LQ93083 61 aa4.45□□□□□ -1.7
SIPA1L3-201ENST00000222345 DNHD1Q96M86 4753 aa4.44□□□□□ -1.7
SIPA1L3-201ENST00000222345 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
SIPA1L3-201ENST00000222345 KRTAP4-8Q9BYQ9 185 aa4.44□□□□□ -1.7
SIPA1L3-201ENST00000222345 KRTAP17-1Q9BYP8 105 aa4.41□□□□□ -1.7
SIPA1L3-201ENST00000222345 APOBP04114 4563 aaKnown RBP4.41□□□□□ -1.7
SIPA1L3-201ENST00000222345 LCE2CQ5TA81 110 aa4.4□□□□□ -1.7
SIPA1L3-201ENST00000222345 PRM1P04553 51 aa4.4□□□□□ -1.71
SIPA1L3-201ENST00000222345 FAT3Q8TDW7 4589 aa4.4□□□□□ -1.71
SIPA1L3-201ENST00000222345 MT1BP07438 61 aa4.39□□□□□ -1.71
SIPA1L3-201ENST00000222345 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
SIPA1L3-201ENST00000222345 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
SIPA1L3-201ENST00000222345 KRTAP9-8Q9BYQ0 159 aa4.33□□□□□ -1.72
SIPA1L3-201ENST00000222345 RYR1P21817 5038 aa4.31□□□□□ -1.72
SIPA1L3-201ENST00000222345 HSPG2P98160 4391 aa4.3□□□□□ -1.72
SIPA1L3-201ENST00000222345 PKD1P98161 4303 aa4.3□□□□□ -1.72
SIPA1L3-201ENST00000222345 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
SIPA1L3-201ENST00000222345 MT4P47944 62 aa4.29□□□□□ -1.72
SIPA1L3-201ENST00000222345 KRTAP19-3Q7Z4W3 81 aa4.28□□□□□ -1.72
SIPA1L3-201ENST00000222345 MT1EP04732 61 aa4.25□□□□□ -1.73
SIPA1L3-201ENST00000222345 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
SIPA1L3-201ENST00000222345 LPAP08519 4548 aa4.2□□□□□ -1.74
SIPA1L3-201ENST00000222345 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
SIPA1L3-201ENST00000222345 TNXBP22105 4242 aa4.15□□□□□ -1.74
SIPA1L3-201ENST00000222345 RYR3Q15413 4870 aa4.15□□□□□ -1.75
SIPA1L3-201ENST00000222345 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
SIPA1L3-201ENST00000222345 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
SIPA1L3-201ENST00000222345 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
SIPA1L3-201ENST00000222345 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SIPA1L3-201ENST00000222345 MYCBP2O75592 4640 aa4.09□□□□□ -1.75
SIPA1L3-201ENST00000222345 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
SIPA1L3-201ENST00000222345 MT1MQ8N339 61 aa4.05□□□□□ -1.76
SIPA1L3-201ENST00000222345 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
SIPA1L3-201ENST00000222345 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
SIPA1L3-201ENST00000222345 MT1AP04731 61 aa3.99□□□□□ -1.77
SIPA1L3-201ENST00000222345 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
SIPA1L3-201ENST00000222345 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
SIPA1L3-201ENST00000222345 KRTAP9-6A0A140TA67 174 aa3.93□□□□□ -1.78
SIPA1L3-201ENST00000222345 HYDINQ4G0P3 5121 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms