RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 KRTAP9-2Q9BYQ4 174 aa6.46□□□□□ -1.38
TIMP1-201ENST00000218388 S4R3F8 94 aa6.44□□□□□ -1.38
TIMP1-201ENST00000218388 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
TIMP1-201ENST00000218388 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
TIMP1-201ENST00000218388 KRTAP4-12Q9BQ66 201 aa6.42□□□□□ -1.38
TIMP1-201ENST00000218388 NDUFC1O43677 76 aa6.41□□□□□ -1.38
TIMP1-201ENST00000218388 DMAC1Q96GE9 116 aa6.41□□□□□ -1.38
TIMP1-201ENST00000218388 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
TIMP1-201ENST00000218388 SPANXA2-OT1Q8N9U9 137 aa6.39□□□□□ -1.39
TIMP1-201ENST00000218388 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
TIMP1-201ENST00000218388 LCA10Q71F78 164 aa6.37□□□□□ -1.39
TIMP1-201ENST00000218388 LCE3BQ5TA77 95 aa6.36□□□□□ -1.39
TIMP1-201ENST00000218388 ACYP2P14621 99 aa6.35□□□□□ -1.39
TIMP1-201ENST00000218388 CSAG1Q6PB30 78 aa6.34□□□□□ -1.39
TIMP1-201ENST00000218388 CCDC179H3BU77 68 aa6.32□□□□□ -1.4
TIMP1-201ENST00000218388 H7BZZ5 65 aa6.31□□□□□ -1.4
TIMP1-201ENST00000218388 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
TIMP1-201ENST00000218388 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
TIMP1-201ENST00000218388 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
TIMP1-201ENST00000218388 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
TIMP1-201ENST00000218388 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
TIMP1-201ENST00000218388 MT2AP02795 61 aa6.21□□□□□ -1.42
TIMP1-201ENST00000218388 ATP5EP56381 51 aaPredicted RBP6.21□□□□□ -1.42
TIMP1-201ENST00000218388 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
TIMP1-201ENST00000218388 COA5Q86WW8 74 aa6.17□□□□□ -1.42
TIMP1-201ENST00000218388 MT1FP04733 61 aa6.16□□□□□ -1.42
TIMP1-201ENST00000218388 TMEM258P61165 79 aa6.16□□□□□ -1.42
TIMP1-201ENST00000218388 H0YAA0 97 aa6.15□□□□□ -1.42
TIMP1-201ENST00000218388 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
TIMP1-201ENST00000218388 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
TIMP1-201ENST00000218388 PCP4P48539 62 aa6.1□□□□□ -1.43
TIMP1-201ENST00000218388 ADM2Q7Z4H4 148 aa6.09□□□□□ -1.43
TIMP1-201ENST00000218388 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
TIMP1-201ENST00000218388 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
TIMP1-201ENST00000218388 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
TIMP1-201ENST00000218388 KRTAP4-8A0A0G2JLE6 195 aa5.99□□□□□ -1.45
TIMP1-201ENST00000218388 SEC61GP60059 68 aa5.98□□□□□ -1.45
TIMP1-201ENST00000218388 P0C880 135 aa5.97□□□□□ -1.45
TIMP1-201ENST00000218388 FSIP2Q5CZC0 6907 aa5.97□□□□□ -1.45
TIMP1-201ENST00000218388 SERP1Q9Y6X1 66 aa5.96□□□□□ -1.46
TIMP1-201ENST00000218388 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
TIMP1-201ENST00000218388 R4GN34 69 aa5.93□□□□□ -1.46
TIMP1-201ENST00000218388 KRTAP9-7A8MTY7 169 aa5.92□□□□□ -1.46
TIMP1-201ENST00000218388 LCE1DQ5T752 114 aa5.92□□□□□ -1.46
TIMP1-201ENST00000218388 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
TIMP1-201ENST00000218388 M0QZ58 72 aa5.89□□□□□ -1.47
TIMP1-201ENST00000218388 A0A1B0GU69 56 aa5.88□□□□□ -1.47
TIMP1-201ENST00000218388 USH2AO75445 5202 aa5.86□□□□□ -1.47
TIMP1-201ENST00000218388 Q5VV11 94 aa5.84□□□□□ -1.47
TIMP1-201ENST00000218388 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
TIMP1-201ENST00000218388 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
TIMP1-201ENST00000218388 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
TIMP1-201ENST00000218388 A0A1B0GU33 70 aa5.79□□□□□ -1.48
TIMP1-201ENST00000218388 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
TIMP1-201ENST00000218388 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
TIMP1-201ENST00000218388 V9GYY9 64 aa5.78□□□□□ -1.48
TIMP1-201ENST00000218388 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
TIMP1-201ENST00000218388 SMIM26A0A096LP01 95 aa5.75□□□□□ -1.49
TIMP1-201ENST00000218388 MT1BP07438 61 aa5.75□□□□□ -1.49
TIMP1-201ENST00000218388 KRTAP13-4Q3LI77 160 aa5.72□□□□□ -1.49
TIMP1-201ENST00000218388 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
TIMP1-201ENST00000218388 Q1T7F1 81 aa5.71□□□□□ -1.5
TIMP1-201ENST00000218388 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.5
TIMP1-201ENST00000218388 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
TIMP1-201ENST00000218388 A6NN06 94 aa5.68□□□□□ -1.5
TIMP1-201ENST00000218388 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
TIMP1-201ENST00000218388 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
TIMP1-201ENST00000218388 LCE5AQ5TCM9 118 aa5.65□□□□□ -1.5
TIMP1-201ENST00000218388 UQCR11O14957 56 aa5.64□□□□□ -1.51
TIMP1-201ENST00000218388 A0A0D9SG42 100 aa5.63□□□□□ -1.51
TIMP1-201ENST00000218388 PSPHP1O15172 72 aa5.63□□□□□ -1.51
TIMP1-201ENST00000218388 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
TIMP1-201ENST00000218388 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
TIMP1-201ENST00000218388 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
TIMP1-201ENST00000218388 A8MU10 97 aa5.54□□□□□ -1.52
TIMP1-201ENST00000218388 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
TIMP1-201ENST00000218388 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
TIMP1-201ENST00000218388 MIR22HGQ0VDD5 57 aa5.53□□□□□ -1.52
TIMP1-201ENST00000218388 FCGBPQ9Y6R7 5405 aaPredicted RBP5.53□□□□□ -1.52
TIMP1-201ENST00000218388 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
TIMP1-201ENST00000218388 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
TIMP1-201ENST00000218388 KRTAP4-2Q9BYR5 136 aa5.5□□□□□ -1.53
TIMP1-201ENST00000218388 A6NED7 52 aa5.49□□□□□ -1.53
TIMP1-201ENST00000218388 MT1XP80297 61 aa5.49□□□□□ -1.53
TIMP1-201ENST00000218388 KRTAP12-2P59991 146 aa5.47□□□□□ -1.53
TIMP1-201ENST00000218388 K7ERS5 55 aa5.41□□□□□ -1.54
TIMP1-201ENST00000218388 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
TIMP1-201ENST00000218388 MACF1Q9UPN3 7388 aaKnown RBP5.32□□□□□ -1.56
TIMP1-201ENST00000218388 SYNE2Q8WXH0 6885 aaKnown RBP5.31□□□□□ -1.56
TIMP1-201ENST00000218388 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
TIMP1-201ENST00000218388 KRTAP15-1Q3LI76 137 aa5.25□□□□□ -1.57
TIMP1-201ENST00000218388 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
TIMP1-201ENST00000218388 C10orf95Q9H7T3 257 aa5.21□□□□□ -1.58
TIMP1-201ENST00000218388 TNP1P09430 55 aa5.2□□□□□ -1.58
TIMP1-201ENST00000218388 BRK1Q8WUW1 75 aa5.16□□□□□ -1.58
TIMP1-201ENST00000218388 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
TIMP1-201ENST00000218388 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
TIMP1-201ENST00000218388 KMT2DO14686 5537 aa5.12□□□□□ -1.59
TIMP1-201ENST00000218388 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
TIMP1-201ENST00000218388 ROMO1P60602 79 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms