RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 A0A1B0GU33 70 aa12.67□□□□□ -0.38
SNTA1-201ENST00000217381 H1FX-AS1Q4G0G2 97 aa12.64□□□□□ -0.39
SNTA1-201ENST00000217381 Q5VSD8 79 aa12.63□□□□□ -0.39
SNTA1-201ENST00000217381 RPL37P61927 97 aaKnown RBP12.53□□□□□ -0.4
SNTA1-201ENST00000217381 CSAG1Q6PB30 78 aa12.48□□□□□ -0.41
SNTA1-201ENST00000217381 XP32Q5T750 250 aa12.46□□□□□ -0.41
SNTA1-201ENST00000217381 LINC01554Q52M75 96 aa12.43□□□□□ -0.42
SNTA1-201ENST00000217381 KRTAP3-3Q9BYR6 98 aa12.43□□□□□ -0.42
SNTA1-201ENST00000217381 MYCBP2O75592 4640 aa12.42□□□□□ -0.42
SNTA1-201ENST00000217381 DMBT1Q9UGM3 2413 aaPredicted RBP12.38□□□□□ -0.43
SNTA1-201ENST00000217381 MT1HL1P0DM35 61 aa12.36□□□□□ -0.43
SNTA1-201ENST00000217381 KRTAP4-5Q9BYR2 181 aa12.34□□□□□ -0.43
SNTA1-201ENST00000217381 BIRC6Q9NR09 4857 aa12.34□□□□□ -0.43
SNTA1-201ENST00000217381 KRTAP10-6P60371 365 aaPredicted RBP12.33□□□□□ -0.44
SNTA1-201ENST00000217381 S4R3F8 94 aa12.28□□□□□ -0.44
SNTA1-201ENST00000217381 KRTAP3-2Q9BYR7 98 aa12.25□□□□□ -0.45
SNTA1-201ENST00000217381 K7ERS5 55 aa12.23□□□□□ -0.45
SNTA1-201ENST00000217381 ABCA13Q86UQ4 5058 aa12.21□□□□□ -0.45
SNTA1-201ENST00000217381 KRTAP13-4Q3LI77 160 aa12.2□□□□□ -0.46
SNTA1-201ENST00000217381 HERC2O95714 4834 aa12.18□□□□□ -0.46
SNTA1-201ENST00000217381 KRTAP25-1Q3LHN0 102 aa12.17□□□□□ -0.46
SNTA1-201ENST00000217381 LPAP08519 4548 aa12.08□□□□□ -0.48
SNTA1-201ENST00000217381 P0C880 135 aa12.06□□□□□ -0.48
SNTA1-201ENST00000217381 A0A0D9SG42 100 aa12.05□□□□□ -0.48
SNTA1-201ENST00000217381 LRP2P98164 4655 aa12.01□□□□□ -0.49
SNTA1-201ENST00000217381 TPRXLQ17RH7 258 aa12□□□□□ -0.49
SNTA1-201ENST00000217381 ROMO1P60602 79 aa12□□□□□ -0.49
SNTA1-201ENST00000217381 CRIPTQ9P021 101 aa11.95□□□□□ -0.5
SNTA1-201ENST00000217381 PCLOQ9Y6V0 5065 aa11.9□□□□□ -0.5
SNTA1-201ENST00000217381 KRTAP12-2P59991 146 aa11.79□□□□□ -0.52
SNTA1-201ENST00000217381 J3QL48 77 aa11.72□□□□□ -0.53
SNTA1-201ENST00000217381 KRTAP12-1P59990 96 aa11.71□□□□□ -0.53
SNTA1-201ENST00000217381 M0QZ58 72 aa11.68□□□□□ -0.54
SNTA1-201ENST00000217381 SPINT4Q6UDR6 99 aa11.64□□□□□ -0.55
SNTA1-201ENST00000217381 HERC1Q15751 4861 aa11.62□□□□□ -0.55
SNTA1-201ENST00000217381 MUC17Q685J3 4493 aa11.59□□□□□ -0.55
SNTA1-201ENST00000217381 C10orf95Q9H7T3 257 aa11.57□□□□□ -0.56
SNTA1-201ENST00000217381 SEC61BP60468 96 aaKnown RBP11.5□□□□□ -0.57
SNTA1-201ENST00000217381 KRTAP4-1Q9BYQ7 146 aa11.48□□□□□ -0.57
SNTA1-201ENST00000217381 R4GN34 69 aa11.38□□□□□ -0.59
SNTA1-201ENST00000217381 KRTAP19-2Q3LHN2 52 aa11.32□□□□□ -0.6
SNTA1-201ENST00000217381 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
SNTA1-201ENST00000217381 LORP23490 312 aaPredicted RBP11.28□□□□□ -0.6
SNTA1-201ENST00000217381 H3BS24 57 aa11.25□□□□□ -0.61
SNTA1-201ENST00000217381 MUC2Q02817 5179 aa11.11□□□□□ -0.63
SNTA1-201ENST00000217381 KRTAP15-1Q3LI76 137 aa11.1□□□□□ -0.63
SNTA1-201ENST00000217381 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
SNTA1-201ENST00000217381 FLGP20930 4061 aaPredicted RBP10.94□□□□□ -0.66
SNTA1-201ENST00000217381 RNF213Q63HN8 5207 aa10.87□□□□□ -0.67
SNTA1-201ENST00000217381 CAMK2N1Q7Z7J9 78 aa10.78□□□□□ -0.68
SNTA1-201ENST00000217381 NDUFAF8A1L188 74 aa10.77□□□□□ -0.69
SNTA1-201ENST00000217381 LCE2CQ5TA81 110 aa10.65□□□□□ -0.7
SNTA1-201ENST00000217381 FAT4Q6V0I7 4981 aa10.63□□□□□ -0.71
SNTA1-201ENST00000217381 PP632Q6XCG6 107 aa10.63□□□□□ -0.71
SNTA1-201ENST00000217381 PLAC4Q8WY50 150 aa10.62□□□□□ -0.71
SNTA1-201ENST00000217381 TNP1P09430 55 aa10.4□□□□□ -0.74
SNTA1-201ENST00000217381 SPRR2GQ9BYE4 73 aa10.36□□□□□ -0.75
SNTA1-201ENST00000217381 MT1HP80294 61 aa10.32□□□□□ -0.76
SNTA1-201ENST00000217381 KRTAP19-1Q8IUB9 90 aa10.32□□□□□ -0.76
SNTA1-201ENST00000217381 KRTAP23-1A1A580 65 aa10.31□□□□□ -0.76
SNTA1-201ENST00000217381 M0R2T5 61 aa10.22□□□□□ -0.77
SNTA1-201ENST00000217381 MT1FP04733 61 aa10.15□□□□□ -0.78
SNTA1-201ENST00000217381 MT2AP02795 61 aa10.15□□□□□ -0.79
SNTA1-201ENST00000217381 KRTAP9-8Q9BYQ0 159 aa10.1□□□□□ -0.79
SNTA1-201ENST00000217381 LUZP6Q538Z0 58 aa10.08□□□□□ -0.8
SNTA1-201ENST00000217381 KRTAP10-10P60014 251 aa10.05□□□□□ -0.8
SNTA1-201ENST00000217381 SPRR5A0A1B0GTR4 108 aa9.95□□□□□ -0.82
SNTA1-201ENST00000217381 KRTAP19-8Q3LI54 63 aa9.91□□□□□ -0.82
SNTA1-201ENST00000217381 LCE3AQ5TA76 89 aa9.88□□□□□ -0.83
SNTA1-201ENST00000217381 MT1BP07438 61 aa9.81□□□□□ -0.84
SNTA1-201ENST00000217381 LCE2AQ5TA79 106 aaPredicted RBP9.79□□□□□ -0.84
SNTA1-201ENST00000217381 KRTAP10-5P60370 271 aa9.71□□□□□ -0.85
SNTA1-201ENST00000217381 MT1XP80297 61 aa9.7□□□□□ -0.86
SNTA1-201ENST00000217381 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
SNTA1-201ENST00000217381 KRTAP8-1Q8IUC2 63 aa9.65□□□□□ -0.86
SNTA1-201ENST00000217381 A0A0A0MQY5 61 aa9.55□□□□□ -0.88
SNTA1-201ENST00000217381 KRTAP10-12P60413 245 aa9.49□□□□□ -0.89
SNTA1-201ENST00000217381 KRTAP10-7P60409 375 aaPredicted RBP9.42□□□□□ -0.9
SNTA1-201ENST00000217381 KRTAP12-3P60328 96 aa9.4□□□□□ -0.9
SNTA1-201ENST00000217381 LCE2BO14633 110 aa9.31□□□□□ -0.92
SNTA1-201ENST00000217381 USH2AO75445 5202 aa9.3□□□□□ -0.92
SNTA1-201ENST00000217381 PRO2289Q9P1D8 64 aa9.3□□□□□ -0.92
SNTA1-201ENST00000217381 FSIP2Q5CZC0 6907 aa9.16□□□□□ -0.94
SNTA1-201ENST00000217381 KRTAP19-5Q3LI72 72 aa9.02□□□□□ -0.97
SNTA1-201ENST00000217381 SSPOA2VEC9 5147 aa8.9□□□□□ -0.98
SNTA1-201ENST00000217381 KMT2DO14686 5537 aa8.89□□□□□ -0.99
SNTA1-201ENST00000217381 LCE3CQ5T5A8 94 aa8.86□□□□□ -0.99
SNTA1-201ENST00000217381 KRTAP4-8A0A0G2JLE6 195 aa8.85□□□□□ -0.99
SNTA1-201ENST00000217381 KRTAP4-8Q9BYQ9 185 aa8.85□□□□□ -0.99
SNTA1-201ENST00000217381 LCE2DQ5TA82 110 aaPredicted RBP8.83□□□□□ -1
SNTA1-201ENST00000217381 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
SNTA1-201ENST00000217381 INE1O15225 51 aa8.69□□□□□ -1.02
SNTA1-201ENST00000217381 KRTAP19-7Q3SYF9 63 aa8.65□□□□□ -1.02
SNTA1-201ENST00000217381 KRTAP9-6A8MVA2 160 aa8.55□□□□□ -1.04
SNTA1-201ENST00000217381 KRTAP19-6Q3LI70 58 aa8.53□□□□□ -1.04
SNTA1-201ENST00000217381 FCGBPQ9Y6R7 5405 aaPredicted RBP8.5□□□□□ -1.05
SNTA1-201ENST00000217381 KRTAP4-7Q9BYR0 210 aa8.44□□□□□ -1.06
SNTA1-201ENST00000217381 MT1EP04732 61 aa8.4□□□□□ -1.07
SNTA1-201ENST00000217381 KRTAP19-4Q3LI73 84 aa8.39□□□□□ -1.07
SNTA1-201ENST00000217381 MT1LQ93083 61 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms