RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 SPTSSBQ8NFR3 76 aa11.78□□□□□ -0.52
HOXC8-201ENST00000040584 RPL37P61927 97 aaKnown RBP11.76□□□□□ -0.53
HOXC8-201ENST00000040584 LRP2P98164 4655 aa11.75□□□□□ -0.53
HOXC8-201ENST00000040584 A0A1B0GU69 56 aa11.75□□□□□ -0.53
HOXC8-201ENST00000040584 HMCN2Q8NDA2 5059 aa11.75□□□□□ -0.53
HOXC8-201ENST00000040584 A6NN06 94 aa11.64□□□□□ -0.55
HOXC8-201ENST00000040584 KTN1-AS1Q86SY8 53 aa11.61□□□□□ -0.55
HOXC8-201ENST00000040584 UQCR11O14957 56 aa11.57□□□□□ -0.56
HOXC8-201ENST00000040584 SPATA8Q6RVD6 105 aa11.57□□□□□ -0.56
HOXC8-201ENST00000040584 SEC61BP60468 96 aaKnown RBP11.51□□□□□ -0.57
HOXC8-201ENST00000040584 SEC61GP60059 68 aa11.51□□□□□ -0.57
HOXC8-201ENST00000040584 MIR22HGQ0VDD5 57 aa11.49□□□□□ -0.57
HOXC8-201ENST00000040584 MUC17Q685J3 4493 aa11.44□□□□□ -0.58
HOXC8-201ENST00000040584 KRTAP4-1Q9BYQ7 146 aa11.34□□□□□ -0.59
HOXC8-201ENST00000040584 KRTAP3-1Q9BYR8 98 aa11.32□□□□□ -0.6
HOXC8-201ENST00000040584 COX6B2Q6YFQ2 88 aa11.29□□□□□ -0.6
HOXC8-201ENST00000040584 UBR4Q5T4S7 5183 aa11.28□□□□□ -0.6
HOXC8-201ENST00000040584 MUC2Q02817 5179 aa11.23□□□□□ -0.61
HOXC8-201ENST00000040584 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
HOXC8-201ENST00000040584 A0A1B0GU33 70 aa11.15□□□□□ -0.63
HOXC8-201ENST00000040584 RNF213Q63HN8 5207 aa11.14□□□□□ -0.63
HOXC8-201ENST00000040584 H1FX-AS1Q4G0G2 97 aa11.09□□□□□ -0.63
HOXC8-201ENST00000040584 H0YAA0 97 aa11.04□□□□□ -0.64
HOXC8-201ENST00000040584 KRTAP19-2Q3LHN2 52 aa10.97□□□□□ -0.65
HOXC8-201ENST00000040584 PRAC1Q96KF2 57 aa10.93□□□□□ -0.66
HOXC8-201ENST00000040584 ADM2Q7Z4H4 148 aa10.91□□□□□ -0.66
HOXC8-201ENST00000040584 K7ERS5 55 aa10.89□□□□□ -0.67
HOXC8-201ENST00000040584 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
HOXC8-201ENST00000040584 S4R3F8 94 aa10.87□□□□□ -0.67
HOXC8-201ENST00000040584 LCE2CQ5TA81 110 aa10.81□□□□□ -0.68
HOXC8-201ENST00000040584 FAT4Q6V0I7 4981 aa10.76□□□□□ -0.69
HOXC8-201ENST00000040584 FLGP20930 4061 aaPredicted RBP10.76□□□□□ -0.69
HOXC8-201ENST00000040584 KRTAP10-6P60371 365 aaPredicted RBP10.76□□□□□ -0.69
HOXC8-201ENST00000040584 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
HOXC8-201ENST00000040584 LINC01554Q52M75 96 aa10.72□□□□□ -0.69
HOXC8-201ENST00000040584 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
HOXC8-201ENST00000040584 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
HOXC8-201ENST00000040584 MT1HP80294 61 aa10.61□□□□□ -0.71
HOXC8-201ENST00000040584 KRTAP25-1Q3LHN0 102 aa10.55□□□□□ -0.72
HOXC8-201ENST00000040584 KRTAP13-4Q3LI77 160 aa10.53□□□□□ -0.72
HOXC8-201ENST00000040584 ROMO1P60602 79 aa10.51□□□□□ -0.73
HOXC8-201ENST00000040584 M0R2T5 61 aa10.51□□□□□ -0.73
HOXC8-201ENST00000040584 P0C880 135 aa10.5□□□□□ -0.73
HOXC8-201ENST00000040584 A0A0D9SG42 100 aa10.46□□□□□ -0.74
HOXC8-201ENST00000040584 M0QZ58 72 aa10.42□□□□□ -0.74
HOXC8-201ENST00000040584 LCE2AQ5TA79 106 aaPredicted RBP10.33□□□□□ -0.76
HOXC8-201ENST00000040584 KRTAP12-1P59990 96 aa10.23□□□□□ -0.77
HOXC8-201ENST00000040584 KRTAP12-2P59991 146 aa10.23□□□□□ -0.77
HOXC8-201ENST00000040584 LORP23490 312 aaPredicted RBP10.19□□□□□ -0.78
HOXC8-201ENST00000040584 SPINT4Q6UDR6 99 aa10.19□□□□□ -0.78
HOXC8-201ENST00000040584 KRTAP9-8Q9BYQ0 159 aa10.19□□□□□ -0.78
HOXC8-201ENST00000040584 CRIPTQ9P021 101 aa10.18□□□□□ -0.78
HOXC8-201ENST00000040584 MT2AP02795 61 aa10.13□□□□□ -0.79
HOXC8-201ENST00000040584 MT1FP04733 61 aa10.08□□□□□ -0.8
HOXC8-201ENST00000040584 R4GN34 69 aa10.08□□□□□ -0.8
HOXC8-201ENST00000040584 KRTAP10-10P60014 251 aa10.05□□□□□ -0.8
HOXC8-201ENST00000040584 C10orf95Q9H7T3 257 aa9.89□□□□□ -0.83
HOXC8-201ENST00000040584 KRTAP9-3Q9BYQ3 159 aa9.82□□□□□ -0.84
HOXC8-201ENST00000040584 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
HOXC8-201ENST00000040584 SPRR2GQ9BYE4 73 aa9.8□□□□□ -0.84
HOXC8-201ENST00000040584 LCE2BO14633 110 aa9.6□□□□□ -0.87
HOXC8-201ENST00000040584 KRTAP19-8Q3LI54 63 aa9.57□□□□□ -0.88
HOXC8-201ENST00000040584 KRTAP15-1Q3LI76 137 aa9.56□□□□□ -0.88
HOXC8-201ENST00000040584 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
HOXC8-201ENST00000040584 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
HOXC8-201ENST00000040584 MT1BP07438 61 aa9.49□□□□□ -0.89
HOXC8-201ENST00000040584 H3BS24 57 aa9.46□□□□□ -0.9
HOXC8-201ENST00000040584 USH2AO75445 5202 aa9.43□□□□□ -0.9
HOXC8-201ENST00000040584 PLAC4Q8WY50 150 aa9.43□□□□□ -0.9
HOXC8-201ENST00000040584 FSIP2Q5CZC0 6907 aa9.28□□□□□ -0.92
HOXC8-201ENST00000040584 KRTAP23-1A1A580 65 aa9.28□□□□□ -0.92
HOXC8-201ENST00000040584 TNP1P09430 55 aa9.25□□□□□ -0.93
HOXC8-201ENST00000040584 KRTAP9-2Q9BYQ4 174 aa9.23□□□□□ -0.93
HOXC8-201ENST00000040584 NDUFAF8A1L188 74 aa9.19□□□□□ -0.94
HOXC8-201ENST00000040584 SSPOA2VEC9 5147 aa9.17□□□□□ -0.94
HOXC8-201ENST00000040584 MT1XP80297 61 aa9.13□□□□□ -0.95
HOXC8-201ENST00000040584 KRTAP10-5P60370 271 aa9.11□□□□□ -0.95
HOXC8-201ENST00000040584 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
HOXC8-201ENST00000040584 PRO2289Q9P1D8 64 aa9.02□□□□□ -0.96
HOXC8-201ENST00000040584 LUZP6Q538Z0 58 aa8.89□□□□□ -0.99
HOXC8-201ENST00000040584 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
HOXC8-201ENST00000040584 FCGBPQ9Y6R7 5405 aaPredicted RBP8.82□□□□□ -1
HOXC8-201ENST00000040584 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
HOXC8-201ENST00000040584 SPRR5A0A1B0GTR4 108 aa8.68□□□□□ -1.02
HOXC8-201ENST00000040584 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
HOXC8-201ENST00000040584 LCE3AQ5TA76 89 aa8.62□□□□□ -1.03
HOXC8-201ENST00000040584 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
HOXC8-201ENST00000040584 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
HOXC8-201ENST00000040584 KRTAP9-6A0A140TA67 174 aa8.57□□□□□ -1.04
HOXC8-201ENST00000040584 KMT2DO14686 5537 aa8.57□□□□□ -1.04
HOXC8-201ENST00000040584 KRTAP8-1Q8IUC2 63 aa8.53□□□□□ -1.04
HOXC8-201ENST00000040584 KRTAP4-8A0A0G2JLE6 195 aa8.51□□□□□ -1.05
HOXC8-201ENST00000040584 KRTAP4-8Q9BYQ9 185 aa8.51□□□□□ -1.05
HOXC8-201ENST00000040584 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
HOXC8-201ENST00000040584 A0A0A0MQY5 61 aa8.37□□□□□ -1.07
HOXC8-201ENST00000040584 KRTAP12-3P60328 96 aa8.29□□□□□ -1.08
HOXC8-201ENST00000040584 SYNE2Q8WXH0 6885 aaKnown RBP8.28□□□□□ -1.08
HOXC8-201ENST00000040584 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.21□□□□□ -1.09
HOXC8-201ENST00000040584 KRTAP19-5Q3LI72 72 aa8.21□□□□□ -1.09
HOXC8-201ENST00000040584 KRTAP19-7Q3SYF9 63 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms