RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 C10orf95Q9H7T3 257 aa5.51□□□□□ -1.53
CX3CL1-201ENST00000006053 TPRXLQ17RH7 258 aa5.49□□□□□ -1.53
CX3CL1-201ENST00000006053 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
CX3CL1-201ENST00000006053 PKHD1L1Q86WI1 4243 aa5.49□□□□□ -1.53
CX3CL1-201ENST00000006053 A0A0D9SG42 100 aa5.48□□□□□ -1.53
CX3CL1-201ENST00000006053 A0A1B0GVY2 172 aa5.48□□□□□ -1.53
CX3CL1-201ENST00000006053 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
CX3CL1-201ENST00000006053 APOBP04114 4563 aaKnown RBP5.48□□□□□ -1.53
CX3CL1-201ENST00000006053 Q5VSD8 79 aa5.48□□□□□ -1.53
CX3CL1-201ENST00000006053 RYR2Q92736 4967 aa5.46□□□□□ -1.54
CX3CL1-201ENST00000006053 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
CX3CL1-201ENST00000006053 RYR3Q15413 4870 aa5.45□□□□□ -1.54
CX3CL1-201ENST00000006053 KIAA1109Q2LD37 5005 aa5.44□□□□□ -1.54
CX3CL1-201ENST00000006053 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
CX3CL1-201ENST00000006053 SEC61BP60468 96 aaKnown RBP5.44□□□□□ -1.54
CX3CL1-201ENST00000006053 RPL37P61927 97 aaKnown RBP5.41□□□□□ -1.54
CX3CL1-201ENST00000006053 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
CX3CL1-201ENST00000006053 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
CX3CL1-201ENST00000006053 KRTAP3-3Q9BYR6 98 aa5.4□□□□□ -1.54
CX3CL1-201ENST00000006053 J3QL48 77 aa5.39□□□□□ -1.55
CX3CL1-201ENST00000006053 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
CX3CL1-201ENST00000006053 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
CX3CL1-201ENST00000006053 S4R3F8 94 aa5.37□□□□□ -1.55
CX3CL1-201ENST00000006053 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
CX3CL1-201ENST00000006053 HSPG2P98160 4391 aa5.35□□□□□ -1.55
CX3CL1-201ENST00000006053 KRTAP17-1Q9BYP8 105 aa5.34□□□□□ -1.55
CX3CL1-201ENST00000006053 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
CX3CL1-201ENST00000006053 XP32Q5T750 250 aa5.32□□□□□ -1.56
CX3CL1-201ENST00000006053 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
CX3CL1-201ENST00000006053 RYR1P21817 5038 aa5.29□□□□□ -1.56
CX3CL1-201ENST00000006053 TNXBP22105 4242 aa5.29□□□□□ -1.56
CX3CL1-201ENST00000006053 KRTAP12-2P59991 146 aa5.25□□□□□ -1.57
CX3CL1-201ENST00000006053 KRTAP12-1P59990 96 aa5.18□□□□□ -1.58
CX3CL1-201ENST00000006053 LPAP08519 4548 aa5.16□□□□□ -1.58
CX3CL1-201ENST00000006053 LRP2P98164 4655 aa5.11□□□□□ -1.59
CX3CL1-201ENST00000006053 M0QZ58 72 aa5.1□□□□□ -1.59
CX3CL1-201ENST00000006053 MT1HL1P0DM35 61 aa5.1□□□□□ -1.59
CX3CL1-201ENST00000006053 ABCA13Q86UQ4 5058 aa5.07□□□□□ -1.6
CX3CL1-201ENST00000006053 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
CX3CL1-201ENST00000006053 HERC2O95714 4834 aa5.04□□□□□ -1.6
CX3CL1-201ENST00000006053 R4GN34 69 aa5.02□□□□□ -1.61
CX3CL1-201ENST00000006053 MUC2Q02817 5179 aa4.93□□□□□ -1.62
CX3CL1-201ENST00000006053 LORP23490 312 aaPredicted RBP4.93□□□□□ -1.62
CX3CL1-201ENST00000006053 HERC1Q15751 4861 aa4.9□□□□□ -1.63
CX3CL1-201ENST00000006053 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
CX3CL1-201ENST00000006053 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
CX3CL1-201ENST00000006053 PCLOQ9Y6V0 5065 aa4.85□□□□□ -1.63
CX3CL1-201ENST00000006053 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
CX3CL1-201ENST00000006053 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
CX3CL1-201ENST00000006053 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
CX3CL1-201ENST00000006053 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
CX3CL1-201ENST00000006053 PP632Q6XCG6 107 aa4.69□□□□□ -1.66
CX3CL1-201ENST00000006053 UBR4Q5T4S7 5183 aa4.69□□□□□ -1.66
CX3CL1-201ENST00000006053 M0R2T5 61 aa4.69□□□□□ -1.66
CX3CL1-201ENST00000006053 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
CX3CL1-201ENST00000006053 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
CX3CL1-201ENST00000006053 TNP1P09430 55 aa4.6□□□□□ -1.67
CX3CL1-201ENST00000006053 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
CX3CL1-201ENST00000006053 HMCN2Q8NDA2 5059 aa4.56□□□□□ -1.68
CX3CL1-201ENST00000006053 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
CX3CL1-201ENST00000006053 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
CX3CL1-201ENST00000006053 INE1O15225 51 aa4.43□□□□□ -1.7
CX3CL1-201ENST00000006053 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
CX3CL1-201ENST00000006053 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
CX3CL1-201ENST00000006053 KRTAP19-1Q8IUB9 90 aa4.37□□□□□ -1.71
CX3CL1-201ENST00000006053 LCE2CQ5TA81 110 aa4.36□□□□□ -1.71
CX3CL1-201ENST00000006053 SPRR2GQ9BYE4 73 aa4.36□□□□□ -1.71
CX3CL1-201ENST00000006053 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
CX3CL1-201ENST00000006053 MT1HP80294 61 aa4.31□□□□□ -1.72
CX3CL1-201ENST00000006053 MT1FP04733 61 aa4.26□□□□□ -1.73
CX3CL1-201ENST00000006053 MT2AP02795 61 aa4.24□□□□□ -1.73
CX3CL1-201ENST00000006053 USH2AO75445 5202 aa4.2□□□□□ -1.74
CX3CL1-201ENST00000006053 KRTAP8-1Q8IUC2 63 aa4.17□□□□□ -1.74
CX3CL1-201ENST00000006053 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
CX3CL1-201ENST00000006053 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
CX3CL1-201ENST00000006053 KRTAP19-8Q3LI54 63 aa4.13□□□□□ -1.75
CX3CL1-201ENST00000006053 MT1XP80297 61 aa4.13□□□□□ -1.75
CX3CL1-201ENST00000006053 MT1BP07438 61 aa4.12□□□□□ -1.75
CX3CL1-201ENST00000006053 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
CX3CL1-201ENST00000006053 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
CX3CL1-201ENST00000006053 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
CX3CL1-201ENST00000006053 KMT2DO14686 5537 aa4.01□□□□□ -1.77
CX3CL1-201ENST00000006053 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
CX3CL1-201ENST00000006053 LCE2BO14633 110 aa3.92□□□□□ -1.78
CX3CL1-201ENST00000006053 KRTAP19-5Q3LI72 72 aa3.92□□□□□ -1.78
CX3CL1-201ENST00000006053 LCE2AQ5TA79 106 aaPredicted RBP3.91□□□□□ -1.78
CX3CL1-201ENST00000006053 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
CX3CL1-201ENST00000006053 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
CX3CL1-201ENST00000006053 KRTAP4-8Q9BYQ9 185 aa3.82□□□□□ -1.8
CX3CL1-201ENST00000006053 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
CX3CL1-201ENST00000006053 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
CX3CL1-201ENST00000006053 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
CX3CL1-201ENST00000006053 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
CX3CL1-201ENST00000006053 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
CX3CL1-201ENST00000006053 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
CX3CL1-201ENST00000006053 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
CX3CL1-201ENST00000006053 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
CX3CL1-201ENST00000006053 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
CX3CL1-201ENST00000006053 MUC12Q9UKN1 5478 aa3.61□□□□□ -1.83
CX3CL1-201ENST00000006053 MT1LQ93083 61 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms