RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Ep300B2RWS6 2412 aa5.9□□□□□ -1.46
Bdnf-207ENSMUST00000111047 VcanQ62059 3357 aa5.9□□□□□ -1.46
Bdnf-207ENSMUST00000111047 Ly6lH3BJG9 140 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Prok1Q14A28 105 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Olfr904Q7TRC9 310 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 B430305J03RikQ8BQQ8 176 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Rasl11bQ922H7 247 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Fam241bQ9D882 120 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 CklfQ9DAS1 152 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Cryba4Q9JJV0 196 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gng4P50153 75 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Olfr322Q5NCC8 327 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Pgpep1Q9ESW8 209 aa5.9□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm16442D3YZG3 307 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Smim13E9Q942 88 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 PdpnQ62011 172 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Tmem210Q9D2F0 147 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Rabac1Q9Z0S9 185 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm26920S4R2A5 56 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Zfp292Q9Z2U2 2698 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Psmg4P0C7N9 123 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Defb30Q30KN4 75 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Prr13Q9CQJ5 137 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Card19Q9D1I2 183 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm33815A0A087WNV3 176 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm29644A0A087WPG2 191 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Zfp493E9Q1L8 384 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Atp6v0e1Q9CQD8 81 aa5.89□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Celsr1O35161 3034 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ovol3D3YYM0 189 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm20481G3UXK4 153 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 P01736 120 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 S100a4P07091 101 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Reg1P43137 165 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Tmem129Q8K304 362 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ndufa11Q9D8B4 141 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Josd1Q9DBJ6 202 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Defa34D3Z0J0 93 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Tmem262D3Z338 116 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Esp3J3QN49 87 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 P01791 123 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Cox8bP48772 70 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Cdx4Q07424 282 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ang6Q5GAN0 147 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Trav2Q5R1I9 109 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Slc35d2Q762D5 326 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm17334Q8C6U3 126 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Trav6-6A0A075B603 114 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Trav14n-2A0A0G2JDF5 121 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm3285A0A1W2P7U0 201 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Cox8cA6H666 72 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 KprpB2RUR4 657 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 PspnO70300 156 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ins2P01326 110 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 NpyP57774 97 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Tmem136Q3TYE7 245 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm12888Q3UW77 119 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Spsb3Q571F5 354 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Wisp2Q9Z0G4 251 aa5.88□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Trav19A0A0B4J1K4 119 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm5105Q8C6Y9 112 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Map1aQ9QYR6 2776 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Spg11Q3UHA3 2430 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ighv1-20A0A0A6YX66 117 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm9970F6ZED4 185 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ifitm2Q99J93 144 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Mcrip2Q9CQB2 160 aaKnown RBP5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Cysrt1Q9D1E4 142 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Trav6n-6A0A075B6B2 114 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Tmem141A2AJB2 108 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Cks1brtQ3UNC9 96 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Q3UNZ8 350 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Hspe1Q64433 102 aaKnown RBP5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 IcosQ9WVS0 200 aa5.87□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm5294J3QP53 216 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 P01748 117 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 NdpP48744 131 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gata4Q08369 441 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Minos1Q7TNS2 76 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 BC107364E9Q5A2 140 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 PpdpfQ9CR37 115 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Sec11aQ9R0P6 179 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 1700067P10RikG3X8U2 183 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 PlnP61014 52 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Bsph2Q0Q236 131 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 BC048562Q80ZQ7 204 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Snx22Q8C084 192 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 UrahQ9CRB3 118 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Dkk2Q9QYZ8 259 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Myo15bI7HPW8 3033 aa5.86□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ube2e1P52482 193 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Gm26566Q8CAC1 153 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Ncor2Q9WU42 2472 aaKnown RBP5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Smim20D3Z7Q2 69 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Thy1P01831 162 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Olfr1209Q3SXJ3 310 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Khdc1cQ4KL78 166 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 MycbQ6P8Z1 170 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 F930015N05RikQ8C3A3 210 aa5.85□□□□□ -1.47
Bdnf-207ENSMUST00000111047 Anapc13Q8R034 74 aa5.85□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms