RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Defb18Q30KP5 85 aa12.61□□□□□ -0.39
Clcn3-203ENSMUST00000093490 P01787 123 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 PolP10400 120 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Zfp36l1P23950 338 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ccl6P27784 116 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Zic4Q61467 341 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Rspo1Q9Z132 265 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Nup214Q80U93 2085 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Defa4P28311 92 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Cnot1Q6ZQ08 2375 aaKnown RBP12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Mtatp8P03930 67 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 A930003A15RikQ3U552 87 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 PtprdQ64487 1912 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Ighv1-19A0A0A6YWX0 117 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gata4Q08369 441 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm10188Q3V432 135 aa12.6□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm26727M0QWT1 121 aa12.59□□□□□ -0.39
Clcn3-203ENSMUST00000093490 P04945 108 aa12.59□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Trav14n-2A0A0G2JDF5 121 aa12.59□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Samd5Q3V1H9 173 aa12.59□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Exph5Q0VAV2 1960 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm15128A2ADW8 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm15093A2BI72 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Luzp4B1AV09 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm15127B1AVZ5 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm15107B1B0X0 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm15097E9QA14 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 P01811 117 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Gm15085Q62012 449 aa12.58□□□□□ -0.39
Clcn3-203ENSMUST00000093490 Taf15Q8BQ46 557 aaKnown RBP12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Igkv20-101-2A0A0G2JDU3 113 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Brd3osA0A1B0GRB6 84 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Fam216bQ8CC14 138 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Trav14-3A0A075B607 120 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gm16381A0A1Y7VKT9 73 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 AmelxP63277 210 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Znrf2Q71FD5 238 aa12.58□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ighv1-49A0A0A6YWX2 117 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Tal2Q62282 108 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ube2wQ8VDW4 151 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Rpl35aO55142 110 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Dpm3Q9D1Q4 92 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Them7Q9DCP4 223 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 LitafQ9JLJ0 161 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ighv5-9-1A0A0A6YVS4 126 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 P01630 113 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ighv1-62-3P01754 117 aa12.57□□□□□ -0.4
Clcn3-203ENSMUST00000093490 4930442H23RikQ9D5G7 103 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Nsun4C4P6S0 806 aaKnown RBP12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Hist1h4aP62806 103 aaKnown RBP12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 March3Q8BRX9 218 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Slc25a48Q8BW66 306 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Fam240bJ3QMB3 78 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 CntfrO88507 372 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Tmem86bQ497J1 226 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Msrb3Q8BU85 253 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 P01792 123 aa12.56□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Trav9d-1A0A075B699 112 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Nbl1Q61477 178 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gtsf1Q9DAN6 167 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gm5129F6YHA9 99 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Fxyd7P59648 80 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 F930015N05RikQ8C3A3 210 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gm17677B3GLJ5 116 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Cd33Q63994 403 aa12.55□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Slc25a29Q8BL03 306 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 PmvkQ9D1G2 192 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Rpl32-psP17932 135 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ighv1-23A0A0A6YVW3 117 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 KprpB2RUR4 657 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Tomm6Q9CQN3 74 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ankrd39Q9D2X0 183 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Pkd1l3Q2EG98 2201 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Trav14-2A0A075B694 121 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gm5294J3QP53 216 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Myod1P10085 318 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 HampQ9EQ21 83 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 SelenokQ9JLJ1 94 aa12.54□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Sptbn2Q68FG2 2388 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 RlfA2A7F4 1918 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Ndufa4Q62425 82 aaKnown RBP12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Trav4n-4A0A075B615 110 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gm15217A2CG07 155 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Samd13D3YUG0 102 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 P01789 122 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Trav12-3A0A075B648 115 aa12.53□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Gm19410A0A140LJC7 2098 aa12.52□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Srsf2Q62093 221 aaKnown RBP12.52□□□□□ -0.4
Clcn3-203ENSMUST00000093490 Clec5aQ9R007 190 aa12.52□□□□□ -0.41
Clcn3-203ENSMUST00000093490 SpinklQ8CEK3 90 aa12.52□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Spata25Q9DA57 226 aa12.52□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Phf3B2RQG2 2025 aaKnown RBP12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Smim26Q3V460 107 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 P06330 118 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Sslp1Q3UN54 99 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Gm10604Q3V0X7 143 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Ang2Q64438 145 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 MrapQ9D159 127 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Xcl1P47993 114 aa12.51□□□□□ -0.41
Clcn3-203ENSMUST00000093490 Wfdc9Q3UW41 83 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms