RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Foxc2Q61850 494 aa12.47□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 Minos1Q7TNS2 76 aa12.47□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 Psmb11Q8BG41 302 aa12.47□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 Tmem30bQ8BHG3 353 aa12.47□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 ColqO35348 457 aa12.46□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 Gm5464Q3UY29 175 aa12.46□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 Pxt1Q8K459 51 aa12.46□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 Wfdc2Q9DAU7 174 aa12.46□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 PoleQ9WVF7 2283 aa12.46□□□□□ -0.41
Ttc39b-202ENSMUST00000048274 A0A1Y7VMQ4 148 aa12.46□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Slc35d2Q762D5 326 aa12.46□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Taf15Q8BQ46 557 aaKnown RBP12.46□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Q9D131 166 aa12.46□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Igkv4-59A0A0B4J1I8 117 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Vsig4F6TUL9 280 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 1700056E22RikF7CNM6 234 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Prrx2Q06348 247 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Tmem136Q3TYE7 245 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Prima1Q810F0 153 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Hif1anQ8BLR9 349 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 A130051J06RikQ8CAU1 227 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 TdhQ8K3F7 373 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Stpg1Q9D2F5 341 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Cnn3Q9DAW9 330 aaKnown RBP12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Dopey1Q8BL99 2399 aa12.45□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 BC107364E9Q5A2 140 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Defa6P50704 93 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Msrb2Q78J03 175 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Il22ra1Q80XZ4 581 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 TctaQ8VEA7 122 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 OtorQ9JIE3 128 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Bub3Q9WVA3 326 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Tln2Q71LX4 2375 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Smim13E9Q942 88 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gm28038F7BCN9 126 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gng4P50153 75 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Obox1Q9D350 204 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 RhohQ9D3G9 191 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gm26938S4R185 226 aa12.44□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Med12A2AGH6 2190 aa12.43□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Ighv8-8A0A0A6YXQ0 119 aa12.43□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gm26727M0QWT1 121 aa12.43□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 TroQ6DIC6 2087 aa12.43□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Khdc1aQ3UWR2 166 aa12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Pgpep1lQ9CWB5 130 aa12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Vmn1r63Q9EPT1 300 aa12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Cxcl14Q9WUQ5 99 aa12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Slc25a20Q9Z2Z6 301 aaKnown RBP12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gcn1E9PVA8 2671 aaKnown RBP12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 NbeaQ9EPN1 2936 aa12.42□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Emp2O88662 172 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Olfr1209Q3SXJ3 310 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Odf3l1Q810P2 275 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 E130116L18RikQ8BMV6 101 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Atp6v0bQ91V37 205 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Mrpl16Q99N93 251 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 ManfQ9CXI5 179 aaKnown RBP12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Ep300B2RWS6 2412 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Myo9aQ8C170 2542 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gm5157A0A087WRH8 301 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Trav19A0A0B4J1K4 119 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 S100a8P27005 89 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Smim15Q3UTD9 74 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Snx22Q8C084 192 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gm4763Q8CFJ5 196 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Tppp3Q9CRB6 176 aaKnown RBP12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Ociad2Q9D8W7 154 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Gnb1lQ9EQ15 326 aa12.41□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Trav16d-dv11A0A075B617 117 aa12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Socs3O35718 225 aa12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Cd52Q64389 74 aa12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Srsf1Q6PDM2 248 aaKnown RBP12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Trpt1Q8K3A2 249 aa12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Chac1Q8R3J5 223 aa12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Dkk2Q9QYZ8 259 aa12.4□□□□□ -0.42
Ttc39b-202ENSMUST00000048274 Ighv3-4A0A0A6YXF1 117 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Esp3J3QN49 87 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Gosr1O88630 250 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Q3UNZ8 350 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 G0s2Q61585 103 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Hes7Q8BKT2 225 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Spink6Q8BT20 105 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Atp6v0e1Q9CQD8 81 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 SelenokQ9JLJ1 94 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Ighv6-7A0A0A6YWU3 119 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Gm15293D3YX02 93 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Smr3aQ61900 147 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Gpx7Q99LJ6 186 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Muc5acE9QAQ8 3455 aa12.39□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Fam240bJ3QMB3 78 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 P06330 118 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Gm7489Q3UT34 171 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Olfr322Q5NCC8 327 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Olfr317Q5NCD6 327 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 NpbQ8K4P1 119 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Akap9Q70FJ1 3797 aa12.38□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Ros1Q78DX7 2340 aa12.37□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Gm26602M0QWA4 95 aa12.37□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 Mtatp8P03930 67 aa12.37□□□□□ -0.43
Ttc39b-202ENSMUST00000048274 P06334 169 aa12.37□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms