RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 NpyP57774 97 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Znf672Q99LH4 468 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Zfp119aQ9JIC0 545 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Ighv1-37A0A0A6YW32 117 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Zfp950A0A0U1RQ46 609 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Rnf5O35445 180 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Cd69P37217 199 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 OtorQ9JIE3 128 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Cend1Q9JKC6 149 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Col5a1O88207 1838 aa10.13□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Trav14n-2A0A0G2JDF5 121 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 NdpP48744 131 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Col27a1Q5QNQ9 1845 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Srsf1Q6PDM2 248 aaKnown RBP10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Klhdc1Q80YG3 406 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 P04940 107 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 P04941 107 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Them7Q9DCP4 223 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Trav7n-5A0A075B604 112 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Trav14d-1A0A075B6B1 121 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Scgb1b24B1B0N6 92 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Sap30O88574 220 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 P06334 169 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Oosp2Q4FZG8 168 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Olfr477Q8VGI6 310 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Mlst8Q9DCJ1 326 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Klf13Q9JJZ6 289 aa10.12□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gm28778A0A087WSK7 233 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Igkv19-93A0A0G2JFZ3 115 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gpr82Q8BZR0 328 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Eml6Q5SQM0 1958 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Defa1P11477 93 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Q4KKZ1 196 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Zfp248Q640N4 576 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 D130052B06RikQ3UW13 202 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Xlr5cQ9JJR2 179 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Obp2bA2BHR0 176 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 SbpP15501 199 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Edn1P22387 202 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Pgpep1Q9ESW8 209 aa10.11□□□□□ -0.79
Clcn3-201ENSMUST00000004430 CntfrO88507 372 aa10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 NpsP0C0P8 89 aa10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Mllt11P97783 90 aa10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Gm17324Q8C6J8 137 aa10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 MgaA2AWL7 3003 aaKnown RBP10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Esp24A8R0V6 68 aa10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Dusp14Q9JLY7 198 aa10.1□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Lrrk2Q5S006 2527 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Brd3osA0A1B0GRB6 84 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Itgb1bp1O35671 200 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Vamp8O70404 101 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Wfdc2Q9DAU7 174 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Ighv1-31A0A0A6YWK5 117 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 H2al2bA9Z055 111 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 BC107364E9Q5A2 140 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Tomm6Q9CQN3 74 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Tcf20Q9EPQ8 1987 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Ighv1-55A0A075B5W6 117 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Tcrg-V6A0A075B5Y8 134 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Defa-rs2P17534 91 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Olfr1209Q3SXJ3 310 aa10.09□□□□□ -0.79
Clcn3-201ENSMUST00000004430 Snrnp40Q6PE01 358 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Fbxl15Q91W61 300 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Plac1Q9JI83 173 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 P0C1Z5 52 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Olfr322Q5NCC8 327 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Olfr975Q8VG91 310 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 C330021F23RikQ8C7T0 141 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Plekhb2Q9QZC7 221 aa10.08□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm5819E9PZ96 154 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 P04942 107 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm15294V9GXA7 121 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 P01811 117 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Cks1bP61025 79 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Ndufc2Q9CQ54 120 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Igkv4-91A0A075B5L2 119 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Tdgf1P51865 171 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Rbx1P62878 108 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm7489Q3UT34 171 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Foxc2Q61850 494 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 TdhQ8K3F7 373 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm45521A0A1B0GRK0 198 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm15127B1AVZ5 449 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm15091B1AZM2 449 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Hrct1Q9D6B9 109 aa10.07□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm29666A0A087WQ99 126 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Tmem238A9JSM3 176 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 B1ARW8 110 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Umad1E0CX23 159 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Fam240bJ3QMB3 78 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Ighv1-62-3P01754 117 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Prss29Q99MS4 279 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Psmg4P0C7N9 123 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Svs5P30933 122 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Chac2Q9CQG1 178 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Stpg1Q9D2F5 341 aa10.06□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Gm11020F6ZGD5 61 aa10.05□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Ccl12Q62401 104 aa10.05□□□□□ -0.8
Clcn3-201ENSMUST00000004430 VcanQ62059 3357 aa10.05□□□□□ -0.8
Clcn3-201ENSMUST00000004430 Igkv4-81A0A0G2JEY5 119 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms