RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 KRTAP10-8P60410 259 aa10.37□□□□□ -0.75
PHGDH-209ENST00000641074 SERP2Q8N6R1 65 aa10.37□□□□□ -0.75
PHGDH-209ENST00000641074 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
PHGDH-209ENST00000641074 TNXBP22105 4242 aa10.36□□□□□ -0.75
PHGDH-209ENST00000641074 C8orf17Q9NRJ1 99 aa10.35□□□□□ -0.75
PHGDH-209ENST00000641074 COX7CP15954 63 aa10.34□□□□□ -0.75
PHGDH-209ENST00000641074 SMIM20Q8N5G0 67 aa10.34□□□□□ -0.75
PHGDH-209ENST00000641074 FAT3Q8TDW7 4589 aa10.34□□□□□ -0.75
PHGDH-209ENST00000641074 TRAV7A0A075B6U4 112 aa10.33□□□□□ -0.76
PHGDH-209ENST00000641074 NOTCH2NLQ7Z3S9 236 aa10.33□□□□□ -0.76
PHGDH-209ENST00000641074 FLG2Q5D862 2391 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-209ENST00000641074 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
PHGDH-209ENST00000641074 OCR1Q9BZK8 76 aa10.32□□□□□ -0.76
PHGDH-209ENST00000641074 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
PHGDH-209ENST00000641074 UQCRQO14949 82 aa10.29□□□□□ -0.76
PHGDH-209ENST00000641074 KRTAP4-5Q9BYR2 181 aa10.29□□□□□ -0.76
PHGDH-209ENST00000641074 MYCBP2O75592 4640 aa10.27□□□□□ -0.77
PHGDH-209ENST00000641074 C8orf87E5RJ46 101 aa10.25□□□□□ -0.77
PHGDH-209ENST00000641074 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
PHGDH-209ENST00000641074 MT1HL1P0DM35 61 aa10.23□□□□□ -0.77
PHGDH-209ENST00000641074 LINC00313P59037 77 aa10.23□□□□□ -0.77
PHGDH-209ENST00000641074 TMEM254Q8TBM7 123 aa10.22□□□□□ -0.77
PHGDH-209ENST00000641074 MRPL34Q9BQ48 92 aaKnown RBP10.22□□□□□ -0.77
PHGDH-209ENST00000641074 RETNLBQ9BQ08 111 aa10.2□□□□□ -0.78
PHGDH-209ENST00000641074 C20orf197Q8N268 126 aa10.18□□□□□ -0.78
PHGDH-209ENST00000641074 OXTP01178 125 aa10.16□□□□□ -0.78
PHGDH-209ENST00000641074 NDUFS5O43920 106 aa10.15□□□□□ -0.78
PHGDH-209ENST00000641074 KRTAP16-1A8MUX0 517 aa10.14□□□□□ -0.79
PHGDH-209ENST00000641074 DMBT1Q9UGM3 2413 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-209ENST00000641074 HERC2O95714 4834 aa10.13□□□□□ -0.79
PHGDH-209ENST00000641074 CYSTM1Q9H1C7 97 aa10.13□□□□□ -0.79
PHGDH-209ENST00000641074 C5orf47Q569G3 176 aa10.12□□□□□ -0.79
PHGDH-209ENST00000641074 TP53AIP1Q9HCN2 124 aa10.12□□□□□ -0.79
PHGDH-209ENST00000641074 SNURFQ9Y675 71 aa10.11□□□□□ -0.79
PHGDH-209ENST00000641074 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
PHGDH-209ENST00000641074 KLKP1Q107X0 134 aa10.09□□□□□ -0.79
PHGDH-209ENST00000641074 Q8N9P0 234 aaPredicted RBP10.09□□□□□ -0.79
PHGDH-209ENST00000641074 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
PHGDH-209ENST00000641074 H0Y9P7 68 aa10.06□□□□□ -0.8
PHGDH-209ENST00000641074 TRAV22A0A0B4J277 110 aa10.05□□□□□ -0.8
PHGDH-209ENST00000641074 C9orf92A6NGG3 77 aa10.05□□□□□ -0.8
PHGDH-209ENST00000641074 MP68P56378 58 aa10.05□□□□□ -0.8
PHGDH-209ENST00000641074 FP248Q71RG6 208 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-209ENST00000641074 ZCCHC13Q8WW36 166 aaKnown RBP10.01□□□□□ -0.81
PHGDH-209ENST00000641074 LINC00208Q96KT6 92 aa10.01□□□□□ -0.81
PHGDH-209ENST00000641074 Q5W150 140 aa10.01□□□□□ -0.81
PHGDH-209ENST00000641074 H3BPC8 53 aa9.98□□□□□ -0.81
PHGDH-209ENST00000641074 H7BZZ5 65 aa9.98□□□□□ -0.81
PHGDH-209ENST00000641074 KRTAP13-3Q3SY46 172 aa9.98□□□□□ -0.81
PHGDH-209ENST00000641074 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
PHGDH-209ENST00000641074 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.81
PHGDH-209ENST00000641074 NDUFC1O43677 76 aa9.95□□□□□ -0.82
PHGDH-209ENST00000641074 C20orf166-AS1Q96NR2 134 aa9.93□□□□□ -0.82
PHGDH-209ENST00000641074 A8MUU9 505 aa9.92□□□□□ -0.82
PHGDH-209ENST00000641074 J3QL48 77 aa9.91□□□□□ -0.82
PHGDH-209ENST00000641074 PRR4Q16378 134 aa9.9□□□□□ -0.82
PHGDH-209ENST00000641074 TMEM258P61165 79 aa9.89□□□□□ -0.83
PHGDH-209ENST00000641074 LOC101927531A0A1B0GV80 90 aa9.85□□□□□ -0.83
PHGDH-209ENST00000641074 Q75L30 129 aa9.83□□□□□ -0.84
PHGDH-209ENST00000641074 FAM236DA0A1B0GTK5 79 aa9.8□□□□□ -0.84
PHGDH-209ENST00000641074 FAM236CP0DP71 79 aa9.8□□□□□ -0.84
PHGDH-209ENST00000641074 PCOTHQ58A44 107 aa9.8□□□□□ -0.84
PHGDH-209ENST00000641074 XP32Q5T750 250 aa9.8□□□□□ -0.84
PHGDH-209ENST00000641074 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
PHGDH-209ENST00000641074 IGKV2-30P06310 120 aa9.8□□□□□ -0.84
PHGDH-209ENST00000641074 PCLOQ9Y6V0 5065 aa9.78□□□□□ -0.84
PHGDH-209ENST00000641074 TPRXLQ17RH7 258 aa9.76□□□□□ -0.85
PHGDH-209ENST00000641074 IGKV2D-30A0A075B6S6 120 aa9.75□□□□□ -0.85
PHGDH-209ENST00000641074 RPL37P61927 97 aaKnown RBP9.74□□□□□ -0.85
PHGDH-209ENST00000641074 ATP5EP56381 51 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-209ENST00000641074 SPANXA2-OT1Q8N9U9 137 aa9.71□□□□□ -0.85
PHGDH-209ENST00000641074 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
PHGDH-209ENST00000641074 LPAP08519 4548 aa9.68□□□□□ -0.86
PHGDH-209ENST00000641074 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
PHGDH-209ENST00000641074 HRES1P13985 223 aa9.65□□□□□ -0.86
PHGDH-209ENST00000641074 LRP2P98164 4655 aa9.62□□□□□ -0.87
PHGDH-209ENST00000641074 SPINK7P58062 85 aa9.62□□□□□ -0.87
PHGDH-209ENST00000641074 SERP1Q9Y6X1 66 aa9.59□□□□□ -0.87
PHGDH-209ENST00000641074 RPS28P62857 69 aaKnown RBP9.58□□□□□ -0.88
PHGDH-209ENST00000641074 HERC1Q15751 4861 aa9.54□□□□□ -0.88
PHGDH-209ENST00000641074 C4orf26Q17RF5 130 aa9.5□□□□□ -0.89
PHGDH-209ENST00000641074 DMAC1Q96GE9 116 aa9.5□□□□□ -0.89
PHGDH-209ENST00000641074 COA5Q86WW8 74 aa9.45□□□□□ -0.9
PHGDH-209ENST00000641074 ACYP2P14621 99 aa9.44□□□□□ -0.9
PHGDH-209ENST00000641074 HMCN2Q8NDA2 5059 aa9.42□□□□□ -0.9
PHGDH-209ENST00000641074 SEC61BP60468 96 aaKnown RBP9.42□□□□□ -0.9
PHGDH-209ENST00000641074 KRTAP3-1Q9BYR8 98 aa9.39□□□□□ -0.91
PHGDH-209ENST00000641074 A8MUN3 132 aa9.37□□□□□ -0.91
PHGDH-209ENST00000641074 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
PHGDH-209ENST00000641074 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
PHGDH-209ENST00000641074 MUC17Q685J3 4493 aa9.31□□□□□ -0.92
PHGDH-209ENST00000641074 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
PHGDH-209ENST00000641074 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.92
PHGDH-209ENST00000641074 KRTAP4-1Q9BYQ7 146 aa9.27□□□□□ -0.92
PHGDH-209ENST00000641074 RBM12B-AS1Q9P1G2 102 aa9.19□□□□□ -0.94
PHGDH-209ENST00000641074 Q1T7F1 81 aa9.16□□□□□ -0.94
PHGDH-209ENST00000641074 H1FX-AS1Q4G0G2 97 aa9.13□□□□□ -0.95
PHGDH-209ENST00000641074 MUC2Q02817 5179 aa9.11□□□□□ -0.95
PHGDH-209ENST00000641074 V9GYY9 64 aa9.09□□□□□ -0.95
PHGDH-209ENST00000641074 LCA10Q71F78 164 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms