RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 KRTAP21-3Q3LHN1 58 aa8.24□□□□□ -1.09
HNRNPU-226ENST00000640218 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
HNRNPU-226ENST00000640218 NSD1Q96L73 2696 aaPredicted RBP8.23□□□□□ -1.09
HNRNPU-226ENST00000640218 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
HNRNPU-226ENST00000640218 ITPR1Q14643 2758 aa8.19□□□□□ -1.1
HNRNPU-226ENST00000640218 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
HNRNPU-226ENST00000640218 KMT2BQ9UMN6 2715 aaPredicted RBP8.15□□□□□ -1.1
HNRNPU-226ENST00000640218 DMXL2Q8TDJ6 3036 aa8.15□□□□□ -1.11
HNRNPU-226ENST00000640218 TACC2O95359 2948 aa8.14□□□□□ -1.11
HNRNPU-226ENST00000640218 APCP25054 2843 aa8.13□□□□□ -1.11
HNRNPU-226ENST00000640218 LRBAP50851 2863 aa8.13□□□□□ -1.11
HNRNPU-226ENST00000640218 COL6A3P12111 3177 aa8.13□□□□□ -1.11
HNRNPU-226ENST00000640218 A6NN06 94 aa8.12□□□□□ -1.11
HNRNPU-226ENST00000640218 NBEAQ8NFP9 2946 aa8.12□□□□□ -1.11
HNRNPU-226ENST00000640218 ATMQ13315 3056 aa8.1□□□□□ -1.11
HNRNPU-226ENST00000640218 UTP20O75691 2785 aaKnown RBP8.1□□□□□ -1.11
HNRNPU-226ENST00000640218 MUC3AQ02505 3323 aa8.1□□□□□ -1.11
HNRNPU-226ENST00000640218 ASH1LQ9NR48 2969 aaKnown RBP8.07□□□□□ -1.12
HNRNPU-226ENST00000640218 COL12A1Q99715 3063 aa8.07□□□□□ -1.12
HNRNPU-226ENST00000640218 BOD1L1Q8NFC6 3051 aa8.04□□□□□ -1.12
HNRNPU-226ENST00000640218 SPENQ96T58 3664 aaKnown RBP8.03□□□□□ -1.12
HNRNPU-226ENST00000640218 HIVEP1P15822 2718 aa8.03□□□□□ -1.12
HNRNPU-226ENST00000640218 ADGRG4Q8IZF6 3080 aa8.02□□□□□ -1.12
HNRNPU-226ENST00000640218 CFAP47Q6ZTR5 3102 aa8.01□□□□□ -1.13
HNRNPU-226ENST00000640218 TNP1P09430 55 aa8□□□□□ -1.13
HNRNPU-226ENST00000640218 FLNCQ14315 2725 aa7.97□□□□□ -1.13
HNRNPU-226ENST00000640218 ASPMQ8IZT6 3477 aa7.97□□□□□ -1.13
HNRNPU-226ENST00000640218 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
HNRNPU-226ENST00000640218 ZFHX4Q86UP3 3567 aa7.96□□□□□ -1.14
HNRNPU-226ENST00000640218 KRTAP10-10P60014 251 aa7.95□□□□□ -1.14
HNRNPU-226ENST00000640218 LOC400499M0QZD8 3231 aa7.92□□□□□ -1.14
HNRNPU-226ENST00000640218 NDUFAF8A1L188 74 aa7.92□□□□□ -1.14
HNRNPU-226ENST00000640218 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
HNRNPU-226ENST00000640218 SMG1Q96Q15 3661 aaKnown RBP7.88□□□□□ -1.15
HNRNPU-226ENST00000640218 CELSR2Q9HCU4 2923 aa7.87□□□□□ -1.15
HNRNPU-226ENST00000640218 XP32Q5T750 250 aa7.87□□□□□ -1.15
HNRNPU-226ENST00000640218 DCHS1Q96JQ0 3298 aa7.87□□□□□ -1.15
HNRNPU-226ENST00000640218 KRTAP1-4P0C5Y4 121 aa7.86□□□□□ -1.15
HNRNPU-226ENST00000640218 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
HNRNPU-226ENST00000640218 TENM4Q6N022 2769 aa7.84□□□□□ -1.15
HNRNPU-226ENST00000640218 NIPBLQ6KC79 2804 aaeCLIP7.76□□□□□ -1.172e-6■□□□□ 9
HNRNPU-226ENST00000640218 DCHS2Q6V1P9 2916 aa7.76□□□□□ -1.17
HNRNPU-226ENST00000640218 LAMA5O15230 3695 aa7.75□□□□□ -1.17
HNRNPU-226ENST00000640218 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
HNRNPU-226ENST00000640218 DMXL1Q9Y485 3027 aa7.69□□□□□ -1.18
HNRNPU-226ENST00000640218 TNRC18O15417 2968 aaPredicted RBP7.69□□□□□ -1.18
HNRNPU-226ENST00000640218 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
HNRNPU-226ENST00000640218 H0YAA0 97 aa7.68□□□□□ -1.18
HNRNPU-226ENST00000640218 ZANQ9Y493 2812 aa7.65□□□□□ -1.19
HNRNPU-226ENST00000640218 CSMD1Q96PZ7 3565 aa7.64□□□□□ -1.19
HNRNPU-226ENST00000640218 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
HNRNPU-226ENST00000640218 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
HNRNPU-226ENST00000640218 TENM1Q9UKZ4 2725 aa7.57□□□□□ -1.2
HNRNPU-226ENST00000640218 RELNP78509 3460 aa7.57□□□□□ -1.2
HNRNPU-226ENST00000640218 HRNRQ86YZ3 2850 aaPredicted RBP7.56□□□□□ -1.2
HNRNPU-226ENST00000640218 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
HNRNPU-226ENST00000640218 NBPF19A0A087WUL8 3843 aa7.55□□□□□ -1.2
HNRNPU-226ENST00000640218 FBN2P35556 2912 aa7.55□□□□□ -1.2
HNRNPU-226ENST00000640218 SVEP1Q4LDE5 3571 aa7.55□□□□□ -1.2
HNRNPU-226ENST00000640218 P0C880 135 aa7.54□□□□□ -1.2
HNRNPU-226ENST00000640218 NF1P21359 2839 aa7.53□□□□□ -1.2
HNRNPU-226ENST00000640218 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
HNRNPU-226ENST00000640218 TENM2Q9NT68 2774 aa7.46□□□□□ -1.22
HNRNPU-226ENST00000640218 TENM3Q9P273 2699 aa7.45□□□□□ -1.22
HNRNPU-226ENST00000640218 ZFHX3Q15911 3703 aa7.44□□□□□ -1.22
HNRNPU-226ENST00000640218 TGP01266 2768 aa7.38□□□□□ -1.23
HNRNPU-226ENST00000640218 VPS13CQ709C8 3753 aa7.28□□□□□ -1.24
HNRNPU-226ENST00000640218 PKD1L1Q8TDX9 2849 aa7.27□□□□□ -1.25
HNRNPU-226ENST00000640218 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
HNRNPU-226ENST00000640218 MXRA5Q9NR99 2828 aa7.2□□□□□ -1.26
HNRNPU-226ENST00000640218 VWFP04275 2813 aa7.19□□□□□ -1.26
HNRNPU-226ENST00000640218 PDZD2O15018 2839 aa7.15□□□□□ -1.27
HNRNPU-226ENST00000640218 KRTAP13-4Q3LI77 160 aa7.12□□□□□ -1.27
HNRNPU-226ENST00000640218 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
HNRNPU-226ENST00000640218 CSMD2Q7Z408 3487 aa7.1□□□□□ -1.27
HNRNPU-226ENST00000640218 CRCT1Q9UGL9 99 aa7.09□□□□□ -1.27
HNRNPU-226ENST00000640218 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
HNRNPU-226ENST00000640218 CUBNO60494 3623 aa7.04□□□□□ -1.28
HNRNPU-226ENST00000640218 AKAP9Q99996 3911 aa6.95□□□□□ -1.3
HNRNPU-226ENST00000640218 KRTAP15-1Q3LI76 137 aa6.91□□□□□ -1.3
HNRNPU-226ENST00000640218 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
HNRNPU-226ENST00000640218 KRTAP4-5Q9BYR2 181 aa6.86□□□□□ -1.31
HNRNPU-226ENST00000640218 KRTAP10-6P60371 365 aaPredicted RBP6.84□□□□□ -1.31
HNRNPU-226ENST00000640218 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
HNRNPU-226ENST00000640218 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
HNRNPU-226ENST00000640218 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-226ENST00000640218 ANK3Q12955 4377 aaKnown RBP6.77□□□□□ -1.33
HNRNPU-226ENST00000640218 ZNF469Q96JG9 3925 aaPredicted RBP6.76□□□□□ -1.33
HNRNPU-226ENST00000640218 OTOGQ6ZRI0 2925 aa6.76□□□□□ -1.33
HNRNPU-226ENST00000640218 MEGF8Q7Z7M0 2845 aa6.75□□□□□ -1.33
HNRNPU-226ENST00000640218 MT1HL1P0DM35 61 aa6.71□□□□□ -1.33
HNRNPU-226ENST00000640218 COL7A1Q02388 2944 aa6.67□□□□□ -1.34
HNRNPU-226ENST00000640218 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
HNRNPU-226ENST00000640218 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
HNRNPU-226ENST00000640218 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
HNRNPU-226ENST00000640218 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
HNRNPU-226ENST00000640218 HUWE1Q7Z6Z7 4374 aaKnown RBP6.47□□□□□ -1.37
HNRNPU-226ENST00000640218 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
HNRNPU-226ENST00000640218 INE1O15225 51 aa6.39□□□□□ -1.39
HNRNPU-226ENST00000640218 KRTAP12-3P60328 96 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms