RNA–Protein interactions for RNA: ENST00000639888.1

SPIN3-230, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 4,299 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-230ENST00000639888 KRTAP7-1Q8IUC3 87 aa6.66□□□□□ -1.34
SPIN3-230ENST00000639888 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
SPIN3-230ENST00000639888 STAB2Q8WWQ8 2551 aa6.65□□□□□ -1.34
SPIN3-230ENST00000639888 VPS13CQ709C8 3753 aa6.65□□□□□ -1.34
SPIN3-230ENST00000639888 A0A0D9SG42 100 aa6.65□□□□□ -1.35
SPIN3-230ENST00000639888 APLNQ9ULZ1 77 aa6.64□□□□□ -1.35
SPIN3-230ENST00000639888 PLAC8Q9NZF1 115 aa6.64□□□□□ -1.35
SPIN3-230ENST00000639888 ZNF861PO60384 105 aa6.63□□□□□ -1.35
SPIN3-230ENST00000639888 IGLV5-52A0A0A0MRZ9 124 aa6.62□□□□□ -1.35
SPIN3-230ENST00000639888 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
SPIN3-230ENST00000639888 ZFHX3Q15911 3703 aa6.61□□□□□ -1.35
SPIN3-230ENST00000639888 LY6G6CO95867 125 aa6.59□□□□□ -1.35
SPIN3-230ENST00000639888 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
SPIN3-230ENST00000639888 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
SPIN3-230ENST00000639888 KRTAP11-1Q8IUC1 163 aa6.56□□□□□ -1.36
SPIN3-230ENST00000639888 NBDYA0A0U1RRE5 68 aa6.54□□□□□ -1.36
SPIN3-230ENST00000639888 A8MUU9 505 aa6.53□□□□□ -1.36
SPIN3-230ENST00000639888 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.53□□□□□ -1.36
SPIN3-230ENST00000639888 WWC2-AS2Q96NR7 200 aa6.52□□□□□ -1.37
SPIN3-230ENST00000639888 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
SPIN3-230ENST00000639888 A0A0A0MQY5 61 aa6.5□□□□□ -1.37
SPIN3-230ENST00000639888 VWFP04275 2813 aa6.49□□□□□ -1.37
SPIN3-230ENST00000639888 PDZD2O15018 2839 aa6.48□□□□□ -1.37
SPIN3-230ENST00000639888 TYMSOSQ8TAI1 123 aa6.47□□□□□ -1.37
SPIN3-230ENST00000639888 KRTAP1-5Q9BYS1 174 aa6.47□□□□□ -1.37
SPIN3-230ENST00000639888 NBPF19A0A087WUL8 3843 aa6.47□□□□□ -1.37
SPIN3-230ENST00000639888 LINC00304Q8N9R0 145 aa6.46□□□□□ -1.37
SPIN3-230ENST00000639888 TENM1Q9UKZ4 2725 aa6.46□□□□□ -1.38
SPIN3-230ENST00000639888 PANO1I0J062 215 aa6.45□□□□□ -1.38
SPIN3-230ENST00000639888 C9orf92A6NGG3 77 aa6.45□□□□□ -1.38
SPIN3-230ENST00000639888 H1FX-AS1Q4G0G2 97 aa6.45□□□□□ -1.38
SPIN3-230ENST00000639888 NUPR2A6NF83 97 aa6.44□□□□□ -1.38
SPIN3-230ENST00000639888 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
SPIN3-230ENST00000639888 A0A087WTM6 91 aa6.41□□□□□ -1.38
SPIN3-230ENST00000639888 RPL37P61927 97 aaKnown RBP6.39□□□□□ -1.39
SPIN3-230ENST00000639888 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
SPIN3-230ENST00000639888 LUZP6Q538Z0 58 aa6.39□□□□□ -1.39
SPIN3-230ENST00000639888 OTOGQ6ZRI0 2925 aa6.38□□□□□ -1.39
SPIN3-230ENST00000639888 TENM3Q9P273 2699 aa6.36□□□□□ -1.39
SPIN3-230ENST00000639888 Q6ZSA8 131 aa6.36□□□□□ -1.39
SPIN3-230ENST00000639888 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
SPIN3-230ENST00000639888 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
SPIN3-230ENST00000639888 TGP01266 2768 aa6.34□□□□□ -1.39
SPIN3-230ENST00000639888 PKD1L1Q8TDX9 2849 aa6.34□□□□□ -1.4
SPIN3-230ENST00000639888 KMT2BQ9UMN6 2715 aaPredicted RBP6.33□□□□□ -1.4
SPIN3-230ENST00000639888 H0YAA0 97 aa6.32□□□□□ -1.4
SPIN3-230ENST00000639888 ANK3Q12955 4377 aaKnown RBP6.3□□□□□ -1.4
SPIN3-230ENST00000639888 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
SPIN3-230ENST00000639888 C10orf95Q9H7T3 257 aa6.27□□□□□ -1.41
SPIN3-230ENST00000639888 FBN1P35555 2871 aaKnown RBP6.26□□□□□ -1.41
SPIN3-230ENST00000639888 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
SPIN3-230ENST00000639888 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
SPIN3-230ENST00000639888 COX6B2Q6YFQ2 88 aa6.23□□□□□ -1.41
SPIN3-230ENST00000639888 P0C880 135 aa6.21□□□□□ -1.41
SPIN3-230ENST00000639888 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
SPIN3-230ENST00000639888 SMR3BP02814 79 aaPredicted RBP6.1□□□□□ -1.43
SPIN3-230ENST00000639888 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
SPIN3-230ENST00000639888 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
SPIN3-230ENST00000639888 TENM2Q9NT68 2774 aa6.07□□□□□ -1.44
SPIN3-230ENST00000639888 Q6ZRN7 208 aaPredicted RBP6.06□□□□□ -1.44
SPIN3-230ENST00000639888 S4R3F8 94 aa6.05□□□□□ -1.44
SPIN3-230ENST00000639888 TPRXLQ17RH7 258 aa6.01□□□□□ -1.45
SPIN3-230ENST00000639888 J3QL48 77 aa5.97□□□□□ -1.45
SPIN3-230ENST00000639888 KRTAP10-2P60368 255 aa5.96□□□□□ -1.46
SPIN3-230ENST00000639888 FBN3Q75N90 2809 aa5.94□□□□□ -1.46
SPIN3-230ENST00000639888 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
SPIN3-230ENST00000639888 R4GN34 69 aa5.92□□□□□ -1.46
SPIN3-230ENST00000639888 KRTAP10-1P60331 282 aa5.91□□□□□ -1.46
SPIN3-230ENST00000639888 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
SPIN3-230ENST00000639888 M0QZ58 72 aa5.9□□□□□ -1.47
SPIN3-230ENST00000639888 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
SPIN3-230ENST00000639888 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SPIN3-230ENST00000639888 MEGF8Q7Z7M0 2845 aa5.83□□□□□ -1.48
SPIN3-230ENST00000639888 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
SPIN3-230ENST00000639888 KRTAP10-8P60410 259 aa5.79□□□□□ -1.48
SPIN3-230ENST00000639888 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
SPIN3-230ENST00000639888 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
SPIN3-230ENST00000639888 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
SPIN3-230ENST00000639888 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
SPIN3-230ENST00000639888 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
SPIN3-230ENST00000639888 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
SPIN3-230ENST00000639888 ANK2Q01484 3957 aa5.67□□□□□ -1.5
SPIN3-230ENST00000639888 DNAH10Q8IVF4 4471 aa5.65□□□□□ -1.5
SPIN3-230ENST00000639888 KRTAP10-6P60371 365 aaPredicted RBP5.65□□□□□ -1.51
SPIN3-230ENST00000639888 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
SPIN3-230ENST00000639888 DNAH9Q9NYC9 4486 aa5.59□□□□□ -1.52
SPIN3-230ENST00000639888 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
SPIN3-230ENST00000639888 XP32Q5T750 250 aa5.54□□□□□ -1.52
SPIN3-230ENST00000639888 PP632Q6XCG6 107 aa5.54□□□□□ -1.52
SPIN3-230ENST00000639888 CMYA5Q8N3K9 4069 aa5.51□□□□□ -1.53
SPIN3-230ENST00000639888 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
SPIN3-230ENST00000639888 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
SPIN3-230ENST00000639888 DNAH3Q8TD57 4116 aa5.5□□□□□ -1.53
SPIN3-230ENST00000639888 LYSTQ99698 3801 aa5.48□□□□□ -1.53
SPIN3-230ENST00000639888 DNAH1Q9P2D7 4330 aa5.48□□□□□ -1.53
SPIN3-230ENST00000639888 Q5VSD8 79 aa5.45□□□□□ -1.54
SPIN3-230ENST00000639888 TNP1P09430 55 aa5.45□□□□□ -1.54
SPIN3-230ENST00000639888 STARD9Q9P2P6 4700 aa5.42□□□□□ -1.54
SPIN3-230ENST00000639888 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
SPIN3-230ENST00000639888 VPS13DQ5THJ4 4388 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms