RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 Q5VSD8 79 aa6.52□□□□□ -1.37
KCNMA1-259ENST00000639406 NF1P21359 2839 aa6.52□□□□□ -1.37
KCNMA1-259ENST00000639406 FBN2P35556 2912 aa6.51□□□□□ -1.37
KCNMA1-259ENST00000639406 ATRQ13535 2644 aa6.51□□□□□ -1.37
KCNMA1-259ENST00000639406 CFAP46Q8IYW2 2715 aa6.5□□□□□ -1.37
KCNMA1-259ENST00000639406 A8MUU9 505 aa6.49□□□□□ -1.37
KCNMA1-259ENST00000639406 M0QZ58 72 aa6.48□□□□□ -1.37
KCNMA1-259ENST00000639406 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
KCNMA1-259ENST00000639406 KRTAP1-1Q07627 177 aa6.47□□□□□ -1.37
KCNMA1-259ENST00000639406 TEX15Q9BXT5 2789 aa6.46□□□□□ -1.38
KCNMA1-259ENST00000639406 BSNQ9UPA5 3926 aa6.46□□□□□ -1.38
KCNMA1-259ENST00000639406 GCN1Q92616 2671 aaKnown RBP6.46□□□□□ -1.38
KCNMA1-259ENST00000639406 C20orf166-AS1Q96NR2 134 aa6.45□□□□□ -1.38
KCNMA1-259ENST00000639406 TEP1Q99973 2627 aaKnown RBP6.44□□□□□ -1.38
KCNMA1-259ENST00000639406 NBEAL1Q6ZS30 2694 aa6.42□□□□□ -1.38
KCNMA1-259ENST00000639406 PLAC8Q9NZF1 115 aa6.42□□□□□ -1.38
KCNMA1-259ENST00000639406 FLNAP21333 2647 aaKnown RBP6.42□□□□□ -1.38
KCNMA1-259ENST00000639406 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.38
KCNMA1-259ENST00000639406 HRNRQ86YZ3 2850 aaPredicted RBP6.4□□□□□ -1.39
KCNMA1-259ENST00000639406 ITPR3Q14573 2671 aa6.39□□□□□ -1.39
KCNMA1-259ENST00000639406 UBR5O95071 2799 aaPredicted RBP6.38□□□□□ -1.39
KCNMA1-259ENST00000639406 KRTAP4-16G5E9R7 235 aaPredicted RBP6.38□□□□□ -1.39
KCNMA1-259ENST00000639406 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
KCNMA1-259ENST00000639406 MGAM2Q2M2H8 2515 aa6.36□□□□□ -1.39
KCNMA1-259ENST00000639406 MAST4O15021 2626 aa6.35□□□□□ -1.39
KCNMA1-259ENST00000639406 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
KCNMA1-259ENST00000639406 IGSF10Q6WRI0 2623 aa6.33□□□□□ -1.4
KCNMA1-259ENST00000639406 HELZ2Q9BYK8 2649 aaKnown RBP6.31□□□□□ -1.4
KCNMA1-259ENST00000639406 BAHCC1Q9P281 2608 aa6.3□□□□□ -1.4
KCNMA1-259ENST00000639406 NOTCH1P46531 2555 aa6.28□□□□□ -1.4
KCNMA1-259ENST00000639406 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
KCNMA1-259ENST00000639406 MXRA5Q9NR99 2828 aa6.27□□□□□ -1.41
KCNMA1-259ENST00000639406 UNC79Q9P2D8 2635 aa6.27□□□□□ -1.41
KCNMA1-259ENST00000639406 HIVEP1P15822 2718 aa6.27□□□□□ -1.41
KCNMA1-259ENST00000639406 ITPR2Q14571 2701 aa6.26□□□□□ -1.41
KCNMA1-259ENST00000639406 SETXQ7Z333 2677 aaKnown RBP6.22□□□□□ -1.41
KCNMA1-259ENST00000639406 APCP25054 2843 aa6.2□□□□□ -1.42
KCNMA1-259ENST00000639406 COL6A5A8TX70 2615 aa6.19□□□□□ -1.42
KCNMA1-259ENST00000639406 PDZD2O15018 2839 aa6.19□□□□□ -1.42
KCNMA1-259ENST00000639406 KRTAP1-5Q9BYS1 174 aa6.17□□□□□ -1.42
KCNMA1-259ENST00000639406 STAB1Q9NY15 2570 aa6.14□□□□□ -1.43
KCNMA1-259ENST00000639406 NBPF19A0A087WUL8 3843 aa6.13□□□□□ -1.43
KCNMA1-259ENST00000639406 NSD1Q96L73 2696 aaPredicted RBP6.12□□□□□ -1.43
KCNMA1-259ENST00000639406 P0C880 135 aa6.11□□□□□ -1.43
KCNMA1-259ENST00000639406 AKAP9Q99996 3911 aa6.08□□□□□ -1.44
KCNMA1-259ENST00000639406 TNP1P09430 55 aa6.08□□□□□ -1.44
KCNMA1-259ENST00000639406 KRTAP10-1P60331 282 aa6.07□□□□□ -1.44
KCNMA1-259ENST00000639406 H0YAA0 97 aa6.07□□□□□ -1.44
KCNMA1-259ENST00000639406 FBN1P35555 2871 aaKnown RBP6.07□□□□□ -1.44
KCNMA1-259ENST00000639406 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
KCNMA1-259ENST00000639406 KRTAP7-1Q8IUC3 87 aa6.04□□□□□ -1.44
KCNMA1-259ENST00000639406 VWFP04275 2813 aa6.02□□□□□ -1.45
KCNMA1-259ENST00000639406 FLG2Q5D862 2391 aaPredicted RBP6□□□□□ -1.45
KCNMA1-259ENST00000639406 KRTAP10-2P60368 255 aa6□□□□□ -1.45
KCNMA1-259ENST00000639406 ZNF469Q96JG9 3925 aaPredicted RBP5.99□□□□□ -1.45
KCNMA1-259ENST00000639406 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
KCNMA1-259ENST00000639406 KRTAP10-8P60410 259 aa5.95□□□□□ -1.46
KCNMA1-259ENST00000639406 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
KCNMA1-259ENST00000639406 TENM1Q9UKZ4 2725 aa5.94□□□□□ -1.46
KCNMA1-259ENST00000639406 PKD1L1Q8TDX9 2849 aa5.93□□□□□ -1.46
KCNMA1-259ENST00000639406 KRTAP13-2Q52LG2 175 aa5.91□□□□□ -1.46
KCNMA1-259ENST00000639406 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
KCNMA1-259ENST00000639406 KMT2BQ9UMN6 2715 aaPredicted RBP5.87□□□□□ -1.47
KCNMA1-259ENST00000639406 Q6ZRN7 208 aaPredicted RBP5.86□□□□□ -1.47
KCNMA1-259ENST00000639406 OTOGQ6ZRI0 2925 aa5.86□□□□□ -1.47
KCNMA1-259ENST00000639406 TENM4Q6N022 2769 aa5.83□□□□□ -1.48
KCNMA1-259ENST00000639406 TRRAPQ9Y4A5 3859 aa5.83□□□□□ -1.48
KCNMA1-259ENST00000639406 STAB2Q8WWQ8 2551 aa5.82□□□□□ -1.48
KCNMA1-259ENST00000639406 CSMD3Q7Z407 3707 aa5.81□□□□□ -1.48
KCNMA1-259ENST00000639406 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
KCNMA1-259ENST00000639406 TENM3Q9P273 2699 aa5.79□□□□□ -1.48
KCNMA1-259ENST00000639406 TPRXLQ17RH7 258 aa5.69□□□□□ -1.5
KCNMA1-259ENST00000639406 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
KCNMA1-259ENST00000639406 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
KCNMA1-259ENST00000639406 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
KCNMA1-259ENST00000639406 KRTAP13-3Q3SY46 172 aa5.56□□□□□ -1.52
KCNMA1-259ENST00000639406 PRO2289Q9P1D8 64 aa5.56□□□□□ -1.52
KCNMA1-259ENST00000639406 XP32Q5T750 250 aa5.54□□□□□ -1.52
KCNMA1-259ENST00000639406 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
KCNMA1-259ENST00000639406 TGP01266 2768 aa5.52□□□□□ -1.53
KCNMA1-259ENST00000639406 KRTAP1-4P0C5Y4 121 aa5.5□□□□□ -1.53
KCNMA1-259ENST00000639406 A0A1B0GVY2 172 aa5.5□□□□□ -1.53
KCNMA1-259ENST00000639406 KRTAP10-10P60014 251 aa5.5□□□□□ -1.53
KCNMA1-259ENST00000639406 KRTAP13-4Q3LI77 160 aa5.49□□□□□ -1.53
KCNMA1-259ENST00000639406 INE1O15225 51 aa5.49□□□□□ -1.53
KCNMA1-259ENST00000639406 KRTAP12-1P59990 96 aa5.46□□□□□ -1.53
KCNMA1-259ENST00000639406 ANK2Q01484 3957 aa5.39□□□□□ -1.55
KCNMA1-259ENST00000639406 FBN3Q75N90 2809 aa5.32□□□□□ -1.56
KCNMA1-259ENST00000639406 ANK3Q12955 4377 aaKnown RBP5.32□□□□□ -1.56
KCNMA1-259ENST00000639406 LYSTQ99698 3801 aa5.28□□□□□ -1.56
KCNMA1-259ENST00000639406 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
KCNMA1-259ENST00000639406 KRTAP10-6P60371 365 aaPredicted RBP5.2□□□□□ -1.58
KCNMA1-259ENST00000639406 MEGF8Q7Z7M0 2845 aa5.12□□□□□ -1.59
KCNMA1-259ENST00000639406 DNAH10Q8IVF4 4471 aa5.1□□□□□ -1.59
KCNMA1-259ENST00000639406 DNAH7Q8WXX0 4024 aa4.98□□□□□ -1.61
KCNMA1-259ENST00000639406 KRTAP3-2Q9BYR7 98 aa4.97□□□□□ -1.61
KCNMA1-259ENST00000639406 DNAH9Q9NYC9 4486 aa4.91□□□□□ -1.62
KCNMA1-259ENST00000639406 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
KCNMA1-259ENST00000639406 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
KCNMA1-259ENST00000639406 HUWE1Q7Z6Z7 4374 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms