RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
TCF4-288ENST00000637923 KRTAP10-8P60410 259 aa3.05□□□□□ -1.92
TCF4-288ENST00000637923 CENPEQ02224 2701 aa3.05□□□□□ -1.92
TCF4-288ENST00000637923 VPS13CQ709C8 3753 aa3.04□□□□□ -1.92
TCF4-288ENST00000637923 KRTAP21-3Q3LHN1 58 aa3.04□□□□□ -1.92
TCF4-288ENST00000637923 ITPR1Q14643 2758 aa3.03□□□□□ -1.92
TCF4-288ENST00000637923 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
TCF4-288ENST00000637923 NBEAL1Q6ZS30 2694 aa3.03□□□□□ -1.92
TCF4-288ENST00000637923 A0A0A0MQY5 61 aa3.03□□□□□ -1.92
TCF4-288ENST00000637923 Q6ZRN7 208 aaPredicted RBP3.02□□□□□ -1.93
TCF4-288ENST00000637923 A8MU10 97 aa3.02□□□□□ -1.93
TCF4-288ENST00000637923 Q75L30 129 aa3.02□□□□□ -1.93
TCF4-288ENST00000637923 KRTAP13-2Q52LG2 175 aa3.01□□□□□ -1.93
TCF4-288ENST00000637923 UNC79Q9P2D8 2635 aa3.01□□□□□ -1.93
TCF4-288ENST00000637923 BSNQ9UPA5 3926 aa3.01□□□□□ -1.93
TCF4-288ENST00000637923 LINC01558Q9Y6Z2 57 aa3□□□□□ -1.93
TCF4-288ENST00000637923 COL6A5A8TX70 2615 aa3□□□□□ -1.93
TCF4-288ENST00000637923 CELSR1Q9NYQ6 3014 aa3□□□□□ -1.93
TCF4-288ENST00000637923 ITPR2Q14571 2701 aa2.99□□□□□ -1.93
TCF4-288ENST00000637923 DMBT1Q9UGM3 2413 aaPredicted RBP2.98□□□□□ -1.93
TCF4-288ENST00000637923 APCP25054 2843 aa2.98□□□□□ -1.93
TCF4-288ENST00000637923 C10orf95Q9H7T3 257 aa2.97□□□□□ -1.93
TCF4-288ENST00000637923 TNP1P09430 55 aa2.97□□□□□ -1.93
TCF4-288ENST00000637923 Q5VV11 94 aa2.95□□□□□ -1.94
TCF4-288ENST00000637923 NBPF19A0A087WUL8 3843 aa2.95□□□□□ -1.94
TCF4-288ENST00000637923 KRTAP4-16G5E9R7 235 aaPredicted RBP2.94□□□□□ -1.94
TCF4-288ENST00000637923 CYSTM1Q9H1C7 97 aa2.94□□□□□ -1.94
TCF4-288ENST00000637923 NBEAL2Q6ZNJ1 2754 aa2.94□□□□□ -1.94
TCF4-288ENST00000637923 GCN1Q92616 2671 aaKnown RBP2.94□□□□□ -1.94
TCF4-288ENST00000637923 RPS29P62273 56 aaKnown RBP2.94□□□□□ -1.94
TCF4-288ENST00000637923 ZNF292O60281 2723 aa2.93□□□□□ -1.94
TCF4-288ENST00000637923 XP32Q5T750 250 aa2.92□□□□□ -1.94
TCF4-288ENST00000637923 IGSF10Q6WRI0 2623 aa2.92□□□□□ -1.94
TCF4-288ENST00000637923 KRTAP7-1Q8IUC3 87 aa2.92□□□□□ -1.94
TCF4-288ENST00000637923 STAB2Q8WWQ8 2551 aa2.92□□□□□ -1.94
TCF4-288ENST00000637923 DCHS2Q6V1P9 2916 aa2.92□□□□□ -1.94
TCF4-288ENST00000637923 NOTCH1P46531 2555 aa2.92□□□□□ -1.94
TCF4-288ENST00000637923 FBN2P35556 2912 aa2.89□□□□□ -1.95
TCF4-288ENST00000637923 PRO2289Q9P1D8 64 aa2.89□□□□□ -1.95
TCF4-288ENST00000637923 KMT2BQ9UMN6 2715 aaPredicted RBP2.88□□□□□ -1.95
TCF4-288ENST00000637923 UTP20O75691 2785 aaKnown RBP2.88□□□□□ -1.95
TCF4-288ENST00000637923 P0C880 135 aa2.87□□□□□ -1.95
TCF4-288ENST00000637923 ASB16-AS1Q495Z4 193 aa2.87□□□□□ -1.95
TCF4-288ENST00000637923 KRTAP29-1A8MX34 341 aaPredicted RBP2.86□□□□□ -1.95
TCF4-288ENST00000637923 H3BS24 57 aa2.86□□□□□ -1.95
TCF4-288ENST00000637923 CELSR2Q9HCU4 2923 aa2.86□□□□□ -1.95
TCF4-288ENST00000637923 UBR5O95071 2799 aaPredicted RBP2.85□□□□□ -1.95
TCF4-288ENST00000637923 NF1P21359 2839 aa2.85□□□□□ -1.95
TCF4-288ENST00000637923 KRTAP13-1Q8IUC0 172 aa2.84□□□□□ -1.95
TCF4-288ENST00000637923 HIVEP1P15822 2718 aa2.84□□□□□ -1.95
TCF4-288ENST00000637923 TPRXLQ17RH7 258 aa2.84□□□□□ -1.95
TCF4-288ENST00000637923 NSD1Q96L73 2696 aaPredicted RBP2.84□□□□□ -1.95
TCF4-288ENST00000637923 Q5XG85 94 aa2.84□□□□□ -1.96
TCF4-288ENST00000637923 ZANQ9Y493 2812 aa2.83□□□□□ -1.96
TCF4-288ENST00000637923 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
TCF4-288ENST00000637923 ZNF469Q96JG9 3925 aaPredicted RBP2.81□□□□□ -1.96
TCF4-288ENST00000637923 TENM4Q6N022 2769 aa2.8□□□□□ -1.96
TCF4-288ENST00000637923 KRTAP25-1Q3LHN0 102 aa2.79□□□□□ -1.96
TCF4-288ENST00000637923 HRNRQ86YZ3 2850 aaPredicted RBP2.79□□□□□ -1.96
TCF4-288ENST00000637923 NDUFAF8A1L188 74 aa2.78□□□□□ -1.96
TCF4-288ENST00000637923 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
TCF4-288ENST00000637923 KRTAP13-3Q3SY46 172 aa2.77□□□□□ -1.97
TCF4-288ENST00000637923 FLNCQ14315 2725 aa2.77□□□□□ -1.97
TCF4-288ENST00000637923 NIPBLQ6KC79 2804 aaeCLIP2.76□□□□□ -1.97
TCF4-288ENST00000637923 TENM2Q9NT68 2774 aa2.75□□□□□ -1.97
TCF4-288ENST00000637923 MXRA5Q9NR99 2828 aa2.75□□□□□ -1.97
TCF4-288ENST00000637923 AKAP9Q99996 3911 aa2.75□□□□□ -1.97
TCF4-288ENST00000637923 KRTAP16-1A8MUX0 517 aa2.74□□□□□ -1.97
TCF4-288ENST00000637923 TENM1Q9UKZ4 2725 aa2.72□□□□□ -1.97
TCF4-288ENST00000637923 PDZD2O15018 2839 aa2.71□□□□□ -1.98
TCF4-288ENST00000637923 A6NN06 94 aa2.7□□□□□ -1.98
TCF4-288ENST00000637923 RYR1P21817 5038 aa2.69□□□□□ -1.98
TCF4-288ENST00000637923 SRRM2Q9UQ35 2752 aaKnown RBP2.68□□□□□ -1.98
TCF4-288ENST00000637923 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
TCF4-288ENST00000637923 CSMD3Q7Z407 3707 aa2.66□□□□□ -1.98
TCF4-288ENST00000637923 H0YAA0 97 aa2.65□□□□□ -1.99
TCF4-288ENST00000637923 FBN1P35555 2871 aaKnown RBP2.65□□□□□ -1.99
TCF4-288ENST00000637923 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.99
TCF4-288ENST00000637923 VWFP04275 2813 aa2.64□□□□□ -1.99
TCF4-288ENST00000637923 COL7A1Q02388 2944 aa2.63□□□□□ -1.99
TCF4-288ENST00000637923 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
TCF4-288ENST00000637923 KRTAP4-5Q9BYR2 181 aa2.62□□□□□ -1.99
TCF4-288ENST00000637923 KRTAP15-1Q3LI76 137 aa2.6□□□□□ -1.99
TCF4-288ENST00000637923 TENM3Q9P273 2699 aa2.59□□□□□ -2
TCF4-288ENST00000637923 TRRAPQ9Y4A5 3859 aa2.58□□□□□ -2
TCF4-288ENST00000637923 LORP23490 312 aaPredicted RBP2.58□□□□□ -2
TCF4-288ENST00000637923 KRTAP3-3Q9BYR6 98 aa2.57□□□□□ -2
TCF4-288ENST00000637923 KRTAP3-2Q9BYR7 98 aa2.57□□□□□ -2
TCF4-288ENST00000637923 KRTAP17-1Q9BYP8 105 aa2.56□□□□□ -2
TCF4-288ENST00000637923 OTOGQ6ZRI0 2925 aa2.55□□□□□ -2
TCF4-288ENST00000637923 ANK3Q12955 4377 aaKnown RBP2.53□□□□□ -2
TCF4-288ENST00000637923 TGP01266 2768 aa2.52□□□□□ -2.01
TCF4-288ENST00000637923 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
TCF4-288ENST00000637923 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
TCF4-288ENST00000637923 MT1HL1P0DM35 61 aa2.46□□□□□ -2.02
TCF4-288ENST00000637923 KRTAP10-12P60413 245 aa2.46□□□□□ -2.02
TCF4-288ENST00000637923 LYSTQ99698 3801 aa2.45□□□□□ -2.02
TCF4-288ENST00000637923 HUWE1Q7Z6Z7 4374 aaKnown RBP2.45□□□□□ -2.02
TCF4-288ENST00000637923 ANK2Q01484 3957 aa2.45□□□□□ -2.02
TCF4-288ENST00000637923 ALMS1Q8TCU4 4167 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms