RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 DCAF8L2P0C7V8 631 aa9.89□□□□□ -0.83
TCF4-288ENST00000637923 EHMT2Q96KQ7 1210 aa9.1□□□□□ -0.95
TCF4-288ENST00000637923 SUPT5HO00267 1087 aaKnown RBP8.91□□□□□ -0.98
TCF4-288ENST00000637923 SHROOM4Q9ULL8 1493 aa8.82□□□□□ -1
TCF4-288ENST00000637923 RANGAP1P46060 587 aaPredicted RBP8.71□□□□□ -1.01
TCF4-288ENST00000637923 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
TCF4-288ENST00000637923 FAM9AQ8IZU1 332 aaPredicted RBP8.66□□□□□ -1.02
TCF4-288ENST00000637923 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
TCF4-288ENST00000637923 APLP2Q06481 763 aa8.59□□□□□ -1.03
TCF4-288ENST00000637923 CHIC1Q5VXU3 224 aa8.5□□□□□ -1.05
TCF4-288ENST00000637923 MYT1LQ9UL68 1186 aa8.5□□□□□ -1.05
TCF4-288ENST00000637923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.32□□□□□ -1.08
TCF4-288ENST00000637923 HNRNPUL2Q1KMD3 747 aaKnown RBP8.32□□□□□ -1.08
TCF4-288ENST00000637923 NISCHQ9Y2I1 1504 aa8.28□□□□□ -1.08
TCF4-288ENST00000637923 PCGF6Q9BYE7 350 aa8.23□□□□□ -1.09
TCF4-288ENST00000637923 PELP1Q8IZL8 1130 aaKnown RBP8.23□□□□□ -1.09
TCF4-288ENST00000637923 UBTFP17480 764 aaKnown RBP8.22□□□□□ -1.09
TCF4-288ENST00000637923 POLR3GLQ9BT43 218 aa8.21□□□□□ -1.09
TCF4-288ENST00000637923 SLC4A1APQ9BWU0 796 aaKnown RBP8.21□□□□□ -1.1
TCF4-288ENST00000637923 CNGB1Q14028 1251 aaPredicted RBP8.21□□□□□ -1.1
TCF4-288ENST00000637923 PPARGC1BQ86YN6 1023 aaKnown RBP8.16□□□□□ -1.1
TCF4-288ENST00000637923 PLPPR3Q6T4P5 718 aa8.14□□□□□ -1.11
TCF4-288ENST00000637923 ITGAEP38570 1179 aa8.13□□□□□ -1.11
TCF4-288ENST00000637923 TRIM41Q8WV44 630 aa8.13□□□□□ -1.11
TCF4-288ENST00000637923 ERICH6Q7L0X2 663 aa8.11□□□□□ -1.11
TCF4-288ENST00000637923 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
TCF4-288ENST00000637923 FBLN2P98095 1184 aa8.05□□□□□ -1.12
TCF4-288ENST00000637923 BCANQ96GW7 911 aa8.03□□□□□ -1.12
TCF4-288ENST00000637923 SLC24A1O60721 1099 aa8.02□□□□□ -1.13
TCF4-288ENST00000637923 YTHDC1Q96MU7 727 aaKnown RBP8.02□□□□□ -1.13
TCF4-288ENST00000637923 PABPN1Q86U42 306 aaKnown RBP eCLIP7.98□□□□□ -1.13
TCF4-288ENST00000637923 BCL11AQ9H165 835 aa7.94□□□□□ -1.14
TCF4-288ENST00000637923 ARID3CA6NKF2 412 aa7.9□□□□□ -1.14
TCF4-288ENST00000637923 NEFLP07196 543 aa7.89□□□□□ -1.15
TCF4-288ENST00000637923 MYT1Q01538 1121 aa7.87□□□□□ -1.15
TCF4-288ENST00000637923 DAXXQ9UER7 740 aaPredicted RBP7.84□□□□□ -1.15
TCF4-288ENST00000637923 ABCC9O60706 1549 aa7.84□□□□□ -1.16
TCF4-288ENST00000637923 PLEKHG5O94827 1062 aa7.83□□□□□ -1.16
TCF4-288ENST00000637923 A0A0G2JS52 829 aa7.82□□□□□ -1.16
TCF4-288ENST00000637923 TRIM52Q96A61 297 aa7.82□□□□□ -1.16
TCF4-288ENST00000637923 ZNF326Q5BKZ1 582 aaKnown RBP7.82□□□□□ -1.16
TCF4-288ENST00000637923 FAM50AQ14320 339 aaKnown RBP7.82□□□□□ -1.16
TCF4-288ENST00000637923 SCAF1Q9H7N4 1312 aaKnown RBP7.82□□□□□ -1.16
TCF4-288ENST00000637923 ESF1Q9H501 851 aaKnown RBP7.81□□□□□ -1.16
TCF4-288ENST00000637923 CENPBP07199 599 aaPredicted RBP7.8□□□□□ -1.16
TCF4-288ENST00000637923 SENP3Q9H4L4 574 aaPredicted RBP7.79□□□□□ -1.16
TCF4-288ENST00000637923 CLSPNQ9HAW4 1339 aa7.77□□□□□ -1.17
TCF4-288ENST00000637923 STAG3Q9UJ98 1225 aa7.74□□□□□ -1.17
TCF4-288ENST00000637923 P3H3Q8IVL6 736 aa7.72□□□□□ -1.17
TCF4-288ENST00000637923 NEUROD1Q13562 356 aa7.72□□□□□ -1.17
TCF4-288ENST00000637923 ZNF777Q9ULD5 760 aaPredicted RBP7.72□□□□□ -1.17
TCF4-288ENST00000637923 CHGAP10645 457 aaKnown RBP7.72□□□□□ -1.17
TCF4-288ENST00000637923 ZBTB7CA1YPR0 619 aa7.69□□□□□ -1.18
TCF4-288ENST00000637923 NPM1P06748 294 aaKnown RBP eCLIP7.67□□□□□ -1.18
TCF4-288ENST00000637923 ZBTB47Q9UFB7 747 aaPredicted RBP7.67□□□□□ -1.18
TCF4-288ENST00000637923 LOC105371045A0A1W2PR82 267 aa7.66□□□□□ -1.18
TCF4-288ENST00000637923 ZEB1P37275 1124 aaPredicted RBP7.66□□□□□ -1.18
TCF4-288ENST00000637923 ZNF316A6NFI3 1004 aaPredicted RBP7.64□□□□□ -1.19
TCF4-288ENST00000637923 TRHP20396 242 aaPredicted RBP7.62□□□□□ -1.19
TCF4-288ENST00000637923 NEFMP07197 916 aa7.61□□□□□ -1.19
TCF4-288ENST00000637923 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
TCF4-288ENST00000637923 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
TCF4-288ENST00000637923 ARID4BQ4LE39 1312 aaPredicted RBP7.59□□□□□ -1.19
TCF4-288ENST00000637923 HAP1P54257 671 aaPredicted RBP7.57□□□□□ -1.2
TCF4-288ENST00000637923 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.57□□□□□ -1.2
TCF4-288ENST00000637923 ARXQ96QS3 562 aa7.54□□□□□ -1.2
TCF4-288ENST00000637923 TULP1O00294 542 aaPredicted RBP7.51□□□□□ -1.21
TCF4-288ENST00000637923 TRIM26Q12899 539 aaPredicted RBP7.5□□□□□ -1.21
TCF4-288ENST00000637923 KCNH8Q96L42 1107 aa7.49□□□□□ -1.21
TCF4-288ENST00000637923 LMOD2Q6P5Q4 547 aa7.47□□□□□ -1.21
TCF4-288ENST00000637923 NPM2Q86SE8 214 aaKnown RBP7.47□□□□□ -1.21
TCF4-288ENST00000637923 PPP1R15AO75807 674 aaPredicted RBP7.46□□□□□ -1.22
TCF4-288ENST00000637923 NPHP1O15259 732 aa7.45□□□□□ -1.22
TCF4-288ENST00000637923 SALL2Q9Y467 1007 aaPredicted RBP7.45□□□□□ -1.22
TCF4-288ENST00000637923 CHMP7Q8WUX9 453 aaPredicted RBP7.44□□□□□ -1.22
TCF4-288ENST00000637923 CHIC2Q9UKJ5 165 aa7.42□□□□□ -1.22
TCF4-288ENST00000637923 AEBP2Q6ZN18 517 aaPredicted RBP7.42□□□□□ -1.22
TCF4-288ENST00000637923 CDK11AQ9UQ88 783 aaPredicted RBP7.42□□□□□ -1.22
TCF4-288ENST00000637923 KDM2AQ9Y2K7 1162 aa7.41□□□□□ -1.22
TCF4-288ENST00000637923 RTL5Q5HYW3 569 aaPredicted RBP7.41□□□□□ -1.22
TCF4-288ENST00000637923 NCBP3Q53F19 620 aaKnown RBP7.4□□□□□ -1.22
TCF4-288ENST00000637923 MLECQ14165 292 aa7.4□□□□□ -1.22
TCF4-288ENST00000637923 ANP32CO43423 234 aa7.4□□□□□ -1.23
TCF4-288ENST00000637923 HRCP23327 699 aa7.38□□□□□ -1.23
TCF4-288ENST00000637923 TAOK2Q9UL54 1235 aa7.38□□□□□ -1.23
TCF4-288ENST00000637923 PPM1GO15355 546 aaPredicted RBP7.35□□□□□ -1.23
TCF4-288ENST00000637923 HSP90AA1P07900 732 aaKnown RBP7.33□□□□□ -1.24
TCF4-288ENST00000637923 DIEXFQ68CQ4 756 aaKnown RBP7.33□□□□□ -1.24
TCF4-288ENST00000637923 TMC1Q8TDI8 760 aa7.32□□□□□ -1.24
TCF4-288ENST00000637923 ERCC6Q03468 1493 aa7.32□□□□□ -1.24
TCF4-288ENST00000637923 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.32□□□□□ -1.24
TCF4-288ENST00000637923 SOX12O15370 315 aa7.31□□□□□ -1.24
TCF4-288ENST00000637923 CCDC9Q9Y3X0 531 aaKnown RBP7.31□□□□□ -1.24
TCF4-288ENST00000637923 SCRIBQ14160 1630 aa7.31□□□□□ -1.24
TCF4-288ENST00000637923 CDK11BP21127 795 aaKnown RBP7.29□□□□□ -1.24
TCF4-288ENST00000637923 SENP3-EIF4A1A0A087X0R7 540 aa7.29□□□□□ -1.24
TCF4-288ENST00000637923 TPRNQ4KMQ1 711 aa7.29□□□□□ -1.24
TCF4-288ENST00000637923 TSPY4P0CV99 314 aa7.28□□□□□ -1.24
TCF4-288ENST00000637923 TSPY10P0CW01 314 aa7.28□□□□□ -1.24
TCF4-288ENST00000637923 RGL3Q3MIN7 710 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms