RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RTL8CO15255 209 aa8.67□□□□□ -1.02
CLN6-215ENST00000636674 ALMS1Q8TCU4 4167 aa8.67□□□□□ -1.02
CLN6-215ENST00000636674 IGHV6-1A0A0B4J1U7 121 aa8.66□□□□□ -1.02
CLN6-215ENST00000636674 RYR2Q92736 4967 aa8.66□□□□□ -1.02
CLN6-215ENST00000636674 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
CLN6-215ENST00000636674 LOC101927531A0A1B0GV80 90 aa8.66□□□□□ -1.02
CLN6-215ENST00000636674 CDK2AP2O75956 126 aa8.66□□□□□ -1.02
CLN6-215ENST00000636674 DNAH8Q96JB1 4490 aa8.65□□□□□ -1.02
CLN6-215ENST00000636674 HECTD4Q9Y4D8 3996 aa8.65□□□□□ -1.02
CLN6-215ENST00000636674 PCOTHQ58A44 107 aa8.65□□□□□ -1.02
CLN6-215ENST00000636674 PMAIP1Q13794 54 aa8.63□□□□□ -1.03
CLN6-215ENST00000636674 Q75L30 129 aa8.63□□□□□ -1.03
CLN6-215ENST00000636674 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
CLN6-215ENST00000636674 NDUFS5O43920 106 aa8.61□□□□□ -1.03
CLN6-215ENST00000636674 CHKB-CPT1BH3BT56 60 aa8.6□□□□□ -1.03
CLN6-215ENST00000636674 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
CLN6-215ENST00000636674 A0A087X002 238 aa8.59□□□□□ -1.03
CLN6-215ENST00000636674 NOTCH2NLQ7Z3S9 236 aa8.59□□□□□ -1.03
CLN6-215ENST00000636674 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
CLN6-215ENST00000636674 HYDINQ4G0P3 5121 aa8.57□□□□□ -1.04
CLN6-215ENST00000636674 KRTAP13-3Q3SY46 172 aa8.57□□□□□ -1.04
CLN6-215ENST00000636674 IGLV7-43P04211 117 aa8.56□□□□□ -1.04
CLN6-215ENST00000636674 DNAH2Q9P225 4427 aa8.55□□□□□ -1.04
CLN6-215ENST00000636674 A8MU10 97 aa8.54□□□□□ -1.04
CLN6-215ENST00000636674 HRES1P13985 223 aa8.54□□□□□ -1.04
CLN6-215ENST00000636674 FRAS1Q86XX4 4008 aa8.54□□□□□ -1.04
CLN6-215ENST00000636674 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
CLN6-215ENST00000636674 C8orf87E5RJ46 101 aa8.52□□□□□ -1.05
CLN6-215ENST00000636674 SSBP3-AS1Q7Z2R9 100 aa8.51□□□□□ -1.05
CLN6-215ENST00000636674 LY6G6CO95867 125 aa8.5□□□□□ -1.05
CLN6-215ENST00000636674 Q5W150 140 aa8.5□□□□□ -1.05
CLN6-215ENST00000636674 A6NED7 52 aa8.49□□□□□ -1.05
CLN6-215ENST00000636674 LCA10Q71F78 164 aa8.49□□□□□ -1.05
CLN6-215ENST00000636674 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
CLN6-215ENST00000636674 KRTAP3-2Q9BYR7 98 aa8.49□□□□□ -1.05
CLN6-215ENST00000636674 SPAG11AQ6PDA7 123 aa8.49□□□□□ -1.05
CLN6-215ENST00000636674 SPINK6Q6UWN8 80 aa8.49□□□□□ -1.05
CLN6-215ENST00000636674 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
CLN6-215ENST00000636674 C1orf134Q5TEV5 83 aa8.48□□□□□ -1.05
CLN6-215ENST00000636674 ATP11AUNQ6ZP68 121 aa8.48□□□□□ -1.05
CLN6-215ENST00000636674 CIRBP-AS1Q8TBR5 109 aa8.47□□□□□ -1.05
CLN6-215ENST00000636674 CDC42SE1Q9NRR8 79 aa8.47□□□□□ -1.05
CLN6-215ENST00000636674 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
CLN6-215ENST00000636674 ACYP2P14621 99 aa8.4□□□□□ -1.06
CLN6-215ENST00000636674 DMAC1Q96GE9 116 aa8.39□□□□□ -1.07
CLN6-215ENST00000636674 LINC00313P59037 77 aa8.39□□□□□ -1.07
CLN6-215ENST00000636674 DNAH11Q96DT5 4516 aa8.38□□□□□ -1.07
CLN6-215ENST00000636674 SPTSSBQ8NFR3 76 aa8.38□□□□□ -1.07
CLN6-215ENST00000636674 EPPK1P58107 5090 aaKnown RBP8.37□□□□□ -1.07
CLN6-215ENST00000636674 A6NN06 94 aa8.37□□□□□ -1.07
CLN6-215ENST00000636674 KTN1-AS1Q86SY8 53 aa8.37□□□□□ -1.07
CLN6-215ENST00000636674 H3BS24 57 aa8.37□□□□□ -1.07
CLN6-215ENST00000636674 PRR26Q8N8Z3 221 aa8.36□□□□□ -1.07
CLN6-215ENST00000636674 SPINK7P58062 85 aa8.36□□□□□ -1.07
CLN6-215ENST00000636674 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
CLN6-215ENST00000636674 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
CLN6-215ENST00000636674 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
CLN6-215ENST00000636674 Q6ZSA8 131 aa8.33□□□□□ -1.08
CLN6-215ENST00000636674 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
CLN6-215ENST00000636674 KRTAP10-2P60368 255 aa8.32□□□□□ -1.08
CLN6-215ENST00000636674 BIRC6Q9NR09 4857 aa8.32□□□□□ -1.08
CLN6-215ENST00000636674 FAT2Q9NYQ8 4349 aa8.31□□□□□ -1.08
CLN6-215ENST00000636674 LCE2DQ5TA82 110 aaPredicted RBP8.29□□□□□ -1.08
CLN6-215ENST00000636674 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
CLN6-215ENST00000636674 KRTAP10-1P60331 282 aa8.24□□□□□ -1.09
CLN6-215ENST00000636674 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
CLN6-215ENST00000636674 PKD1P98161 4303 aa8.22□□□□□ -1.09
CLN6-215ENST00000636674 C7orf65Q6ZTY9 151 aa8.22□□□□□ -1.09
CLN6-215ENST00000636674 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
CLN6-215ENST00000636674 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
CLN6-215ENST00000636674 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.09
CLN6-215ENST00000636674 A0A1B0GU69 56 aa8.19□□□□□ -1.1
CLN6-215ENST00000636674 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
CLN6-215ENST00000636674 PKHD1P08F94 4074 aa8.16□□□□□ -1.1
CLN6-215ENST00000636674 SPINK1P00995 79 aa8.15□□□□□ -1.1
CLN6-215ENST00000636674 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.11
CLN6-215ENST00000636674 SPATA8Q6RVD6 105 aa8.14□□□□□ -1.11
CLN6-215ENST00000636674 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
CLN6-215ENST00000636674 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
CLN6-215ENST00000636674 PLA2G1BP04054 148 aaKnown RBP8.11□□□□□ -1.11
CLN6-215ENST00000636674 RPS29P62273 56 aaKnown RBP8.11□□□□□ -1.11
CLN6-215ENST00000636674 UQCR11O14957 56 aa8.08□□□□□ -1.12
CLN6-215ENST00000636674 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
CLN6-215ENST00000636674 HERC2O95714 4834 aa8.07□□□□□ -1.12
CLN6-215ENST00000636674 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
CLN6-215ENST00000636674 RYR1P21817 5038 aa8.03□□□□□ -1.12
CLN6-215ENST00000636674 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
CLN6-215ENST00000636674 APOBP04114 4563 aaKnown RBP8.02□□□□□ -1.13
CLN6-215ENST00000636674 HSPG2P98160 4391 aa7.97□□□□□ -1.13
CLN6-215ENST00000636674 Q8N1X5 172 aa7.94□□□□□ -1.14
CLN6-215ENST00000636674 A8MUU9 505 aa7.93□□□□□ -1.14
CLN6-215ENST00000636674 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
CLN6-215ENST00000636674 A0A0A0MQY5 61 aa7.92□□□□□ -1.14
CLN6-215ENST00000636674 PKHD1L1Q86WI1 4243 aa7.92□□□□□ -1.14
CLN6-215ENST00000636674 PRAC1Q96KF2 57 aa7.9□□□□□ -1.15
CLN6-215ENST00000636674 ADM2Q7Z4H4 148 aa7.87□□□□□ -1.15
CLN6-215ENST00000636674 FAT1Q14517 4588 aa7.84□□□□□ -1.15
CLN6-215ENST00000636674 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
CLN6-215ENST00000636674 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
CLN6-215ENST00000636674 ABCA13Q86UQ4 5058 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms