RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 KRTAP1-4P0C5Y4 121 aa11.76□□□□□ -0.53
CLN8-208ENST00000635751 MOBPQ13875 183 aa11.76□□□□□ -0.53
CLN8-208ENST00000635751 ZCCHC13Q8WW36 166 aaKnown RBP11.76□□□□□ -0.53
CLN8-208ENST00000635751 KRTAP4-5Q9BYR2 181 aa11.76□□□□□ -0.53
CLN8-208ENST00000635751 NDUFB1O75438 58 aa11.74□□□□□ -0.53
CLN8-208ENST00000635751 Q96NJ1 140 aa11.74□□□□□ -0.53
CLN8-208ENST00000635751 HERC2O95714 4834 aa11.74□□□□□ -0.53
CLN8-208ENST00000635751 HRCT1Q6UXD1 115 aa11.73□□□□□ -0.53
CLN8-208ENST00000635751 MP68P56378 58 aa11.71□□□□□ -0.54
CLN8-208ENST00000635751 A0A087X002 238 aa11.7□□□□□ -0.54
CLN8-208ENST00000635751 MMP24-AS1A0A0U1RRL7 71 aa11.7□□□□□ -0.54
CLN8-208ENST00000635751 FLG2Q5D862 2391 aaPredicted RBP11.69□□□□□ -0.54
CLN8-208ENST00000635751 FAM229BQ4G0N7 80 aa11.68□□□□□ -0.54
CLN8-208ENST00000635751 Q5XG85 94 aa11.67□□□□□ -0.54
CLN8-208ENST00000635751 LRP1Q07954 4544 aaKnown RBP11.65□□□□□ -0.54
CLN8-208ENST00000635751 KRTAP13-2Q52LG2 175 aa11.65□□□□□ -0.54
CLN8-208ENST00000635751 hDV103S1A0JD37 113 aa11.65□□□□□ -0.55
CLN8-208ENST00000635751 SMIM26A0A096LP01 95 aa11.64□□□□□ -0.55
CLN8-208ENST00000635751 H3BPC8 53 aa11.64□□□□□ -0.55
CLN8-208ENST00000635751 PRR26Q8N8Z3 221 aa11.64□□□□□ -0.55
CLN8-208ENST00000635751 H0Y9P7 68 aa11.63□□□□□ -0.55
CLN8-208ENST00000635751 SVIPQ8NHG7 77 aa11.62□□□□□ -0.55
CLN8-208ENST00000635751 FAT3Q8TDW7 4589 aa11.61□□□□□ -0.55
CLN8-208ENST00000635751 LINC00208Q96KT6 92 aa11.61□□□□□ -0.55
CLN8-208ENST00000635751 TRAV22A0A0B4J277 110 aa11.6□□□□□ -0.55
CLN8-208ENST00000635751 A0A1B0GVX0 72 aa11.6□□□□□ -0.55
CLN8-208ENST00000635751 ASB16-AS1Q495Z4 193 aa11.6□□□□□ -0.55
CLN8-208ENST00000635751 C8orf17Q9NRJ1 99 aa11.6□□□□□ -0.55
CLN8-208ENST00000635751 ABCA13Q86UQ4 5058 aa11.58□□□□□ -0.56
CLN8-208ENST00000635751 C4orf26Q17RF5 130 aa11.58□□□□□ -0.56
CLN8-208ENST00000635751 MYCBP2O75592 4640 aa11.58□□□□□ -0.56
CLN8-208ENST00000635751 TYMSOSQ8TAI1 123 aa11.58□□□□□ -0.56
CLN8-208ENST00000635751 CD164Q04900 197 aa11.57□□□□□ -0.56
CLN8-208ENST00000635751 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
CLN8-208ENST00000635751 SSBP3-AS1Q7Z2R9 100 aa11.56□□□□□ -0.56
CLN8-208ENST00000635751 FP248Q71RG6 208 aaPredicted RBP11.55□□□□□ -0.56
CLN8-208ENST00000635751 TP53AIP1Q9HCN2 124 aa11.55□□□□□ -0.56
CLN8-208ENST00000635751 CYP4F30PQ9H0H9 118 aa11.53□□□□□ -0.56
CLN8-208ENST00000635751 TNXBP22105 4242 aa11.52□□□□□ -0.57
CLN8-208ENST00000635751 C1orf64Q8NEQ6 169 aa11.51□□□□□ -0.57
CLN8-208ENST00000635751 KRTAP10-8P60410 259 aa11.5□□□□□ -0.57
CLN8-208ENST00000635751 SPANXA2-OT1Q8N9U9 137 aa11.47□□□□□ -0.57
CLN8-208ENST00000635751 MRPL34Q9BQ48 92 aaKnown RBP11.47□□□□□ -0.57
CLN8-208ENST00000635751 PRR4Q16378 134 aa11.45□□□□□ -0.58
CLN8-208ENST00000635751 NDUFS5O43920 106 aa11.44□□□□□ -0.58
CLN8-208ENST00000635751 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
CLN8-208ENST00000635751 LINC00304Q8N9R0 145 aa11.43□□□□□ -0.58
CLN8-208ENST00000635751 NOTCH2NLQ7Z3S9 236 aa11.42□□□□□ -0.58
CLN8-208ENST00000635751 C4orf48Q5BLP8 95 aa11.42□□□□□ -0.58
CLN8-208ENST00000635751 DMBT1Q9UGM3 2413 aaPredicted RBP11.38□□□□□ -0.59
CLN8-208ENST00000635751 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
CLN8-208ENST00000635751 SPAG11AQ6PDA7 123 aa11.37□□□□□ -0.59
CLN8-208ENST00000635751 C8orf87E5RJ46 101 aa11.36□□□□□ -0.59
CLN8-208ENST00000635751 SPINK1P00995 79 aa11.35□□□□□ -0.59
CLN8-208ENST00000635751 PCLOQ9Y6V0 5065 aa11.33□□□□□ -0.6
CLN8-208ENST00000635751 IGLV7-46A0A075B6I9 117 aa11.31□□□□□ -0.6
CLN8-208ENST00000635751 J3QL48 77 aa11.31□□□□□ -0.6
CLN8-208ENST00000635751 PCOTHQ58A44 107 aa11.3□□□□□ -0.6
CLN8-208ENST00000635751 Q1T7F1 81 aa11.28□□□□□ -0.6
CLN8-208ENST00000635751 C1orf195Q5TG92 126 aa11.28□□□□□ -0.6
CLN8-208ENST00000635751 LIMD2Q9BT23 127 aa11.28□□□□□ -0.6
CLN8-208ENST00000635751 RPS29P62273 56 aaKnown RBP11.27□□□□□ -0.61
CLN8-208ENST00000635751 LINC00313P59037 77 aa11.25□□□□□ -0.61
CLN8-208ENST00000635751 LOC101927531A0A1B0GV80 90 aa11.25□□□□□ -0.61
CLN8-208ENST00000635751 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
CLN8-208ENST00000635751 Q5W150 140 aa11.21□□□□□ -0.61
CLN8-208ENST00000635751 V9GYY9 64 aa11.19□□□□□ -0.62
CLN8-208ENST00000635751 COA5Q86WW8 74 aa11.17□□□□□ -0.62
CLN8-208ENST00000635751 Q8N9P0 234 aaPredicted RBP11.17□□□□□ -0.62
CLN8-208ENST00000635751 RETNLBQ9BQ08 111 aa11.17□□□□□ -0.62
CLN8-208ENST00000635751 PRO0628Q9UI54 55 aa11.12□□□□□ -0.63
CLN8-208ENST00000635751 KRTAP16-1A8MUX0 517 aa11.11□□□□□ -0.63
CLN8-208ENST00000635751 BRK1Q8WUW1 75 aa11.08□□□□□ -0.64
CLN8-208ENST00000635751 PSPHP1O15172 72 aa11.07□□□□□ -0.64
CLN8-208ENST00000635751 HRES1P13985 223 aa11.04□□□□□ -0.64
CLN8-208ENST00000635751 A8MUN3 132 aa11.02□□□□□ -0.65
CLN8-208ENST00000635751 IGKV2-30P06310 120 aa11□□□□□ -0.65
CLN8-208ENST00000635751 HERC1Q15751 4861 aa10.99□□□□□ -0.65
CLN8-208ENST00000635751 Q5VV11 94 aa10.95□□□□□ -0.66
CLN8-208ENST00000635751 PRR15LQ9BU68 103 aa10.95□□□□□ -0.66
CLN8-208ENST00000635751 ACYP2P14621 99 aa10.93□□□□□ -0.66
CLN8-208ENST00000635751 DMAC1Q96GE9 116 aa10.92□□□□□ -0.66
CLN8-208ENST00000635751 LINC01558Q9Y6Z2 57 aa10.89□□□□□ -0.67
CLN8-208ENST00000635751 C9orf92A6NGG3 77 aa10.88□□□□□ -0.67
CLN8-208ENST00000635751 Q75L30 129 aa10.86□□□□□ -0.67
CLN8-208ENST00000635751 IGKV2D-30A0A075B6S6 120 aa10.86□□□□□ -0.67
CLN8-208ENST00000635751 CHKB-CPT1BH3BT56 60 aa10.86□□□□□ -0.67
CLN8-208ENST00000635751 LPAP08519 4548 aa10.85□□□□□ -0.67
CLN8-208ENST00000635751 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
CLN8-208ENST00000635751 HMCN2Q8NDA2 5059 aa10.76□□□□□ -0.69
CLN8-208ENST00000635751 C7orf65Q6ZTY9 151 aa10.75□□□□□ -0.69
CLN8-208ENST00000635751 A6NED7 52 aa10.72□□□□□ -0.69
CLN8-208ENST00000635751 C20orf166-AS1Q96NR2 134 aa10.72□□□□□ -0.69
CLN8-208ENST00000635751 A8MUU9 505 aa10.71□□□□□ -0.69
CLN8-208ENST00000635751 XP32Q5T750 250 aa10.71□□□□□ -0.69
CLN8-208ENST00000635751 LRP2P98164 4655 aa10.71□□□□□ -0.7
CLN8-208ENST00000635751 A8MU10 97 aa10.65□□□□□ -0.71
CLN8-208ENST00000635751 LCA10Q71F78 164 aa10.63□□□□□ -0.71
CLN8-208ENST00000635751 CDC42SE1Q9NRR8 79 aa10.61□□□□□ -0.71
CLN8-208ENST00000635751 SPINK7P58062 85 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms