RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 M0R2N4 97 aa2.58□□□□□ -2
SDCBP-213ENST00000630925 DNAH7Q8WXX0 4024 aa2.58□□□□□ -2
SDCBP-213ENST00000630925 STARD9Q9P2P6 4700 aa2.57□□□□□ -2
SDCBP-213ENST00000630925 I3L3M4 83 aa2.57□□□□□ -2
SDCBP-213ENST00000630925 SPINK4O60575 86 aa2.57□□□□□ -2
SDCBP-213ENST00000630925 PLECQ15149 4684 aaKnown RBP2.57□□□□□ -2
SDCBP-213ENST00000630925 DNAH10Q8IVF4 4471 aa2.57□□□□□ -2
SDCBP-213ENST00000630925 NDUFA4O00483 81 aa2.56□□□□□ -2
SDCBP-213ENST00000630925 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
SDCBP-213ENST00000630925 COA5Q86WW8 74 aa2.56□□□□□ -2
SDCBP-213ENST00000630925 IGLV4-60A0A075B6I1 120 aa2.55□□□□□ -2
SDCBP-213ENST00000630925 ARL14EPLP0DKL9 152 aa2.55□□□□□ -2
SDCBP-213ENST00000630925 TNCP24821 2201 aa2.55□□□□□ -2
SDCBP-213ENST00000630925 IGKV2D-24A0A075B6R9 120 aa2.54□□□□□ -2
SDCBP-213ENST00000630925 ACYP2P14621 99 aa2.54□□□□□ -2
SDCBP-213ENST00000630925 CADP27708 2225 aa2.54□□□□□ -2
SDCBP-213ENST00000630925 LYNX1G3V0Z9 82 aa2.54□□□□□ -2
SDCBP-213ENST00000630925 LYNX1P0DP58 116 aa2.54□□□□□ -2
SDCBP-213ENST00000630925 DYNC1H1Q14204 4646 aaKnown RBP2.54□□□□□ -2
SDCBP-213ENST00000630925 PIGYQ3MUY2 71 aa2.53□□□□□ -2
SDCBP-213ENST00000630925 Q6ZRN7 208 aaPredicted RBP2.53□□□□□ -2
SDCBP-213ENST00000630925 DEFB108BQ8NET1 73 aa2.53□□□□□ -2
SDCBP-213ENST00000630925 ALMS1Q8TCU4 4167 aa2.53□□□□□ -2
SDCBP-213ENST00000630925 A0A1B0GU69 56 aa2.53□□□□□ -2.01
SDCBP-213ENST00000630925 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
SDCBP-213ENST00000630925 DEFB114Q30KQ6 69 aa2.52□□□□□ -2.01
SDCBP-213ENST00000630925 HSPG2P98160 4391 aa2.52□□□□□ -2.01
SDCBP-213ENST00000630925 COX7BP24311 80 aa2.51□□□□□ -2.01
SDCBP-213ENST00000630925 KRTAP10-3P60369 221 aa2.51□□□□□ -2.01
SDCBP-213ENST00000630925 PRB3Q04118 309 aaPredicted RBP2.51□□□□□ -2.01
SDCBP-213ENST00000630925 ARHGAP5-AS1Q96IT6 56 aa2.51□□□□□ -2.01
SDCBP-213ENST00000630925 K7EIL1 84 aa2.51□□□□□ -2.01
SDCBP-213ENST00000630925 KCNQ1DNQ9H478 68 aa2.51□□□□□ -2.01
SDCBP-213ENST00000630925 ANAPC11Q9NYG5 84 aa2.5□□□□□ -2.01
SDCBP-213ENST00000630925 DNAH11Q96DT5 4516 aa2.5□□□□□ -2.01
SDCBP-213ENST00000630925 KRTAP1-4P0C5Y4 121 aa2.49□□□□□ -2.01
SDCBP-213ENST00000630925 TIMM8BQ9Y5J9 83 aaPredicted RBP2.49□□□□□ -2.01
SDCBP-213ENST00000630925 PLCE1Q9P212 2302 aa2.49□□□□□ -2.01
SDCBP-213ENST00000630925 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
SDCBP-213ENST00000630925 G3V318 75 aa2.49□□□□□ -2.01
SDCBP-213ENST00000630925 LEAP2Q969E1 77 aa2.49□□□□□ -2.01
SDCBP-213ENST00000630925 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
SDCBP-213ENST00000630925 Q6ZQY7 126 aa2.48□□□□□ -2.01
SDCBP-213ENST00000630925 IAPPP10997 89 aa2.48□□□□□ -2.01
SDCBP-213ENST00000630925 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
SDCBP-213ENST00000630925 KMT2AQ03164 3969 aa2.47□□□□□ -2.01
SDCBP-213ENST00000630925 DMBT1Q9UGM3 2413 aaPredicted RBP2.46□□□□□ -2.01
SDCBP-213ENST00000630925 ETDCA0A1B0GVM5 59 aa2.46□□□□□ -2.01
SDCBP-213ENST00000630925 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.01
SDCBP-213ENST00000630925 PRR9Q5T870 116 aa2.46□□□□□ -2.01
SDCBP-213ENST00000630925 FAT2Q9NYQ8 4349 aa2.46□□□□□ -2.02
SDCBP-213ENST00000630925 MYCBP2O75592 4640 aa2.46□□□□□ -2.02
SDCBP-213ENST00000630925 HAMPP81172 84 aa2.46□□□□□ -2.02
SDCBP-213ENST00000630925 Q6ZRX8 168 aa2.46□□□□□ -2.02
SDCBP-213ENST00000630925 MUC2Q02817 5179 aa2.46□□□□□ -2.02
SDCBP-213ENST00000630925 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.45□□□□□ -2.02
SDCBP-213ENST00000630925 NCR3O14931 201 aa2.45□□□□□ -2.02
SDCBP-213ENST00000630925 NDUFA3O95167 84 aa2.45□□□□□ -2.02
SDCBP-213ENST00000630925 RPL39P5Q59GN2 51 aa2.45□□□□□ -2.02
SDCBP-213ENST00000630925 PLAC4Q8WY50 150 aa2.45□□□□□ -2.02
SDCBP-213ENST00000630925 IGKV2-28A0A075B6P5 120 aa2.44□□□□□ -2.02
SDCBP-213ENST00000630925 IGKV2D-28P01615 120 aa2.44□□□□□ -2.02
SDCBP-213ENST00000630925 TMEM167BQ9NRX6 74 aa2.44□□□□□ -2.02
SDCBP-213ENST00000630925 VPS13DQ5THJ4 4388 aa2.44□□□□□ -2.02
SDCBP-213ENST00000630925 DNAH2Q9P225 4427 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 GVQW2A0A096LPI5 108 aaPredicted RBP2.43□□□□□ -2.02
SDCBP-213ENST00000630925 C10orf99Q6UWK7 81 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 BRD3OSQ6XYD6 125 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 SSBP3-AS1Q7Z2R9 100 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 SPINK9Q5DT21 86 aa2.43□□□□□ -2.02
SDCBP-213ENST00000630925 H0YGX0 51 aa2.42□□□□□ -2.02
SDCBP-213ENST00000630925 SMIM11BQ8TCY0 68 aa2.42□□□□□ -2.02
SDCBP-213ENST00000630925 KAAG1Q9UBP8 84 aa2.42□□□□□ -2.02
SDCBP-213ENST00000630925 IGKV2-24A0A0C4DH68 120 aa2.41□□□□□ -2.02
SDCBP-213ENST00000630925 APELAP0DMC3 54 aa2.41□□□□□ -2.02
SDCBP-213ENST00000630925 KRTAP10-11P60412 298 aa2.41□□□□□ -2.02
SDCBP-213ENST00000630925 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
SDCBP-213ENST00000630925 LY6G6CO95867 125 aa2.41□□□□□ -2.02
SDCBP-213ENST00000630925 PKD1P98161 4303 aa2.41□□□□□ -2.02
SDCBP-213ENST00000630925 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.02
SDCBP-213ENST00000630925 CRIP1P50238 77 aa2.4□□□□□ -2.02
SDCBP-213ENST00000630925 KRTAP12-2P59991 146 aa2.4□□□□□ -2.03
SDCBP-213ENST00000630925 WNK2Q9Y3S1 2297 aa2.39□□□□□ -2.03
SDCBP-213ENST00000630925 DNAH17Q9UFH2 4485 aa2.39□□□□□ -2.03
SDCBP-213ENST00000630925 A0A1B0GVY2 172 aa2.38□□□□□ -2.03
SDCBP-213ENST00000630925 H3BUX3 64 aa2.38□□□□□ -2.03
SDCBP-213ENST00000630925 PP632Q6XCG6 107 aa2.38□□□□□ -2.03
SDCBP-213ENST00000630925 DEFB131BA0A096LNP1 70 aa2.37□□□□□ -2.03
SDCBP-213ENST00000630925 GAS8-AS1O95177 125 aa2.37□□□□□ -2.03
SDCBP-213ENST00000630925 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
SDCBP-213ENST00000630925 MINOS1Q5TGZ0 78 aa2.36□□□□□ -2.03
SDCBP-213ENST00000630925 IGFL1Q6UW32 110 aa2.36□□□□□ -2.03
SDCBP-213ENST00000630925 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
SDCBP-213ENST00000630925 FAT1Q14517 4588 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 WT1-ASQ06250 92 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 TMEM167AQ8TBQ9 72 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 ANGP03950 147 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms