RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 A0A1B0GVY2 172 aa6.56□□□□□ -1.36
CHD2-205ENST00000625662 VCANP13611 3396 aa6.54□□□□□ -1.36
CHD2-205ENST00000625662 FRYQ5TBA9 3013 aa6.54□□□□□ -1.36
CHD2-205ENST00000625662 VPS13AQ96RL7 3174 aa6.54□□□□□ -1.36
CHD2-205ENST00000625662 EYSQ5T1H1 3165 aa6.52□□□□□ -1.36
CHD2-205ENST00000625662 A8MUU9 505 aa6.52□□□□□ -1.37
CHD2-205ENST00000625662 SPEGQ15772 3267 aa6.5□□□□□ -1.37
CHD2-205ENST00000625662 FRYLO94915 3013 aa6.5□□□□□ -1.37
CHD2-205ENST00000625662 KRTAP1-4P0C5Y4 121 aa6.5□□□□□ -1.37
CHD2-205ENST00000625662 COL12A1Q99715 3063 aa6.49□□□□□ -1.37
CHD2-205ENST00000625662 ATMQ13315 3056 aa6.47□□□□□ -1.37
CHD2-205ENST00000625662 CELSR3Q9NYQ7 3312 aa6.46□□□□□ -1.38
CHD2-205ENST00000625662 XP32Q5T750 250 aa6.45□□□□□ -1.38
CHD2-205ENST00000625662 LRBAP50851 2863 aa6.45□□□□□ -1.38
CHD2-205ENST00000625662 TACC2O95359 2948 aa6.43□□□□□ -1.38
CHD2-205ENST00000625662 ASH1LQ9NR48 2969 aaKnown RBP6.42□□□□□ -1.38
CHD2-205ENST00000625662 DMXL2Q8TDJ6 3036 aa6.42□□□□□ -1.38
CHD2-205ENST00000625662 SZT2Q5T011 3432 aa6.39□□□□□ -1.39
CHD2-205ENST00000625662 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
CHD2-205ENST00000625662 FREM2Q5SZK8 3169 aa6.38□□□□□ -1.39
CHD2-205ENST00000625662 REV3LO60673 3130 aa6.38□□□□□ -1.39
CHD2-205ENST00000625662 KRTAP10-8P60410 259 aa6.36□□□□□ -1.39
CHD2-205ENST00000625662 USP34Q70CQ2 3546 aa6.34□□□□□ -1.39
CHD2-205ENST00000625662 CRYBG3Q68DQ2 2970 aa6.33□□□□□ -1.4
CHD2-205ENST00000625662 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
CHD2-205ENST00000625662 KALRNO60229 2985 aa6.3□□□□□ -1.4
CHD2-205ENST00000625662 ZZEF1O43149 2961 aa6.29□□□□□ -1.4
CHD2-205ENST00000625662 COL6A3P12111 3177 aa6.25□□□□□ -1.41
CHD2-205ENST00000625662 MYO15AQ9UKN7 3530 aa6.25□□□□□ -1.41
CHD2-205ENST00000625662 TENM2Q9NT68 2774 aa6.25□□□□□ -1.41
CHD2-205ENST00000625662 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
CHD2-205ENST00000625662 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
CHD2-205ENST00000625662 KRTAP10-10P60014 251 aa6.22□□□□□ -1.41
CHD2-205ENST00000625662 NF1P21359 2839 aa6.21□□□□□ -1.41
CHD2-205ENST00000625662 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.41
CHD2-205ENST00000625662 TENM3Q9P273 2699 aa6.2□□□□□ -1.42
CHD2-205ENST00000625662 ADGRG4Q8IZF6 3080 aa6.2□□□□□ -1.42
CHD2-205ENST00000625662 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
CHD2-205ENST00000625662 ZANQ9Y493 2812 aa6.19□□□□□ -1.42
CHD2-205ENST00000625662 DMXL1Q9Y485 3027 aa6.19□□□□□ -1.42
CHD2-205ENST00000625662 HRNRQ86YZ3 2850 aaPredicted RBP6.18□□□□□ -1.42
CHD2-205ENST00000625662 DCHS2Q6V1P9 2916 aa6.18□□□□□ -1.42
CHD2-205ENST00000625662 TNP1P09430 55 aa6.18□□□□□ -1.42
CHD2-205ENST00000625662 CELSR2Q9HCU4 2923 aa6.18□□□□□ -1.42
CHD2-205ENST00000625662 PDZD2O15018 2839 aa6.18□□□□□ -1.42
CHD2-205ENST00000625662 BOD1L1Q8NFC6 3051 aa6.17□□□□□ -1.42
CHD2-205ENST00000625662 P0C880 135 aa6.16□□□□□ -1.42
CHD2-205ENST00000625662 CFAP47Q6ZTR5 3102 aa6.13□□□□□ -1.43
CHD2-205ENST00000625662 SPTBN5Q9NRC6 3674 aaKnown RBP6.13□□□□□ -1.43
CHD2-205ENST00000625662 LOC400499M0QZD8 3231 aa6.08□□□□□ -1.44
CHD2-205ENST00000625662 WDFY3Q8IZQ1 3526 aa6.03□□□□□ -1.44
CHD2-205ENST00000625662 FBN2P35556 2912 aa6.02□□□□□ -1.45
CHD2-205ENST00000625662 DCHS1Q96JQ0 3298 aa6□□□□□ -1.45
CHD2-205ENST00000625662 OTOGQ6ZRI0 2925 aa5.99□□□□□ -1.45
CHD2-205ENST00000625662 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
CHD2-205ENST00000625662 H0YAA0 97 aa5.86□□□□□ -1.47
CHD2-205ENST00000625662 CELSR1Q9NYQ6 3014 aa5.86□□□□□ -1.47
CHD2-205ENST00000625662 MT1HL1P0DM35 61 aa5.84□□□□□ -1.47
CHD2-205ENST00000625662 PKD1L1Q8TDX9 2849 aa5.84□□□□□ -1.47
CHD2-205ENST00000625662 ASPMQ8IZT6 3477 aa5.83□□□□□ -1.48
CHD2-205ENST00000625662 FBN3Q75N90 2809 aa5.82□□□□□ -1.48
CHD2-205ENST00000625662 INE1O15225 51 aa5.81□□□□□ -1.48
CHD2-205ENST00000625662 ZFHX4Q86UP3 3567 aa5.81□□□□□ -1.48
CHD2-205ENST00000625662 ANK3Q12955 4377 aaKnown RBP5.8□□□□□ -1.48
CHD2-205ENST00000625662 TGP01266 2768 aa5.78□□□□□ -1.48
CHD2-205ENST00000625662 MUC3AQ02505 3323 aa5.77□□□□□ -1.49
CHD2-205ENST00000625662 VWFP04275 2813 aa5.75□□□□□ -1.49
CHD2-205ENST00000625662 SMG1Q96Q15 3661 aaKnown RBP5.72□□□□□ -1.49
CHD2-205ENST00000625662 CSMD1Q96PZ7 3565 aa5.72□□□□□ -1.49
CHD2-205ENST00000625662 DMDP11532 3685 aa5.71□□□□□ -1.5
CHD2-205ENST00000625662 FBN1P35555 2871 aaKnown RBP5.7□□□□□ -1.5
CHD2-205ENST00000625662 ALMS1Q8TCU4 4167 aa5.69□□□□□ -1.5
CHD2-205ENST00000625662 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
CHD2-205ENST00000625662 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
CHD2-205ENST00000625662 LAMA5O15230 3695 aa5.66□□□□□ -1.5
CHD2-205ENST00000625662 NBPF19A0A087WUL8 3843 aa5.66□□□□□ -1.5
CHD2-205ENST00000625662 RELNP78509 3460 aa5.64□□□□□ -1.51
CHD2-205ENST00000625662 SPENQ96T58 3664 aaKnown RBP5.59□□□□□ -1.51
CHD2-205ENST00000625662 SVEP1Q4LDE5 3571 aa5.56□□□□□ -1.52
CHD2-205ENST00000625662 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CHD2-205ENST00000625662 ZFHX3Q15911 3703 aa5.51□□□□□ -1.53
CHD2-205ENST00000625662 HUWE1Q7Z6Z7 4374 aaKnown RBP5.49□□□□□ -1.53
CHD2-205ENST00000625662 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
CHD2-205ENST00000625662 CUBNO60494 3623 aa5.48□□□□□ -1.53
CHD2-205ENST00000625662 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
CHD2-205ENST00000625662 KRTAP3-1Q9BYR8 98 aa5.43□□□□□ -1.54
CHD2-205ENST00000625662 MEGF8Q7Z7M0 2845 aa5.39□□□□□ -1.55
CHD2-205ENST00000625662 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
CHD2-205ENST00000625662 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
CHD2-205ENST00000625662 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
CHD2-205ENST00000625662 DNAH11Q96DT5 4516 aa5.29□□□□□ -1.56
CHD2-205ENST00000625662 DNAH9Q9NYC9 4486 aa5.26□□□□□ -1.57
CHD2-205ENST00000625662 COL7A1Q02388 2944 aa5.24□□□□□ -1.57
CHD2-205ENST00000625662 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
CHD2-205ENST00000625662 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
CHD2-205ENST00000625662 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
CHD2-205ENST00000625662 TRRAPQ9Y4A5 3859 aa5.21□□□□□ -1.58
CHD2-205ENST00000625662 BSNQ9UPA5 3926 aa5.2□□□□□ -1.58
CHD2-205ENST00000625662 CSMD2Q7Z408 3487 aa5.2□□□□□ -1.58
CHD2-205ENST00000625662 DNAH5Q8TE73 4624 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms