RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
LINC00552-201ENST00000625151 HYDINQ4G0P3 5121 aa9.09□□□□□ -0.95
LINC00552-201ENST00000625151 RTL8CO15255 209 aa9.09□□□□□ -0.95
LINC00552-201ENST00000625151 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
LINC00552-201ENST00000625151 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
LINC00552-201ENST00000625151 A0A1B0GVX0 72 aa9.09□□□□□ -0.95
LINC00552-201ENST00000625151 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
LINC00552-201ENST00000625151 TP53AIP1Q9HCN2 124 aa9.09□□□□□ -0.95
LINC00552-201ENST00000625151 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
LINC00552-201ENST00000625151 C7orf65Q6ZTY9 151 aa9.08□□□□□ -0.96
LINC00552-201ENST00000625151 Q6ZR54 194 aa9.06□□□□□ -0.96
LINC00552-201ENST00000625151 COA5Q86WW8 74 aa9.06□□□□□ -0.96
LINC00552-201ENST00000625151 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
LINC00552-201ENST00000625151 SPTSSBQ8NFR3 76 aa9.06□□□□□ -0.96
LINC00552-201ENST00000625151 A0A087X002 238 aa9.05□□□□□ -0.96
LINC00552-201ENST00000625151 ZNF861PO60384 105 aa9.05□□□□□ -0.96
LINC00552-201ENST00000625151 NOTCH2NLQ7Z3S9 236 aa9.05□□□□□ -0.96
LINC00552-201ENST00000625151 LCA10Q71F78 164 aa9.05□□□□□ -0.96
LINC00552-201ENST00000625151 PLAC8Q9NZF1 115 aa9.04□□□□□ -0.96
LINC00552-201ENST00000625151 ALMS1Q8TCU4 4167 aa9.03□□□□□ -0.96
LINC00552-201ENST00000625151 DNAH6Q9C0G6 4158 aa9.03□□□□□ -0.96
LINC00552-201ENST00000625151 CDK2AP2O75956 126 aa9.03□□□□□ -0.96
LINC00552-201ENST00000625151 Q75L30 129 aa9.03□□□□□ -0.96
LINC00552-201ENST00000625151 MRPL34Q9BQ48 92 aaKnown RBP9.02□□□□□ -0.97
LINC00552-201ENST00000625151 LY6G6CO95867 125 aa9□□□□□ -0.97
LINC00552-201ENST00000625151 PRR15LQ9BU68 103 aa9□□□□□ -0.97
LINC00552-201ENST00000625151 SACSQ9NZJ4 4579 aa8.99□□□□□ -0.97
LINC00552-201ENST00000625151 CDC42SE1Q9NRR8 79 aa8.99□□□□□ -0.97
LINC00552-201ENST00000625151 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
LINC00552-201ENST00000625151 H3BS24 57 aa8.97□□□□□ -0.97
LINC00552-201ENST00000625151 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
LINC00552-201ENST00000625151 A6NED7 52 aa8.95□□□□□ -0.98
LINC00552-201ENST00000625151 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
LINC00552-201ENST00000625151 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
LINC00552-201ENST00000625151 FAT2Q9NYQ8 4349 aa8.93□□□□□ -0.98
LINC00552-201ENST00000625151 CIRBP-AS1Q8TBR5 109 aa8.92□□□□□ -0.98
LINC00552-201ENST00000625151 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
LINC00552-201ENST00000625151 Q5W150 140 aa8.92□□□□□ -0.98
LINC00552-201ENST00000625151 HRES1P13985 223 aa8.91□□□□□ -0.98
LINC00552-201ENST00000625151 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.99
LINC00552-201ENST00000625151 KRTAP13-3Q3SY46 172 aa8.89□□□□□ -0.99
LINC00552-201ENST00000625151 C1orf134Q5TEV5 83 aa8.89□□□□□ -0.99
LINC00552-201ENST00000625151 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
LINC00552-201ENST00000625151 PKD1P98161 4303 aa8.86□□□□□ -0.99
LINC00552-201ENST00000625151 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
LINC00552-201ENST00000625151 SSBP3-AS1Q7Z2R9 100 aa8.82□□□□□ -1
LINC00552-201ENST00000625151 KRTAP10-2P60368 255 aa8.79□□□□□ -1
LINC00552-201ENST00000625151 RYR2Q92736 4967 aa8.78□□□□□ -1
LINC00552-201ENST00000625151 LRP1BQ9NZR2 4599 aa8.78□□□□□ -1
LINC00552-201ENST00000625151 PRR26Q8N8Z3 221 aa8.78□□□□□ -1
LINC00552-201ENST00000625151 LINC01554Q52M75 96 aa8.77□□□□□ -1.01
LINC00552-201ENST00000625151 PKHD1P08F94 4074 aa8.76□□□□□ -1.01
LINC00552-201ENST00000625151 KRTAP13-2Q52LG2 175 aa8.76□□□□□ -1.01
LINC00552-201ENST00000625151 LINC00313P59037 77 aa8.75□□□□□ -1.01
LINC00552-201ENST00000625151 SPINK7P58062 85 aa8.74□□□□□ -1.01
LINC00552-201ENST00000625151 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
LINC00552-201ENST00000625151 ACYP2P14621 99 aa8.71□□□□□ -1.01
LINC00552-201ENST00000625151 FAM229AH3BQW9 127 aa8.7□□□□□ -1.02
LINC00552-201ENST00000625151 DMAC1Q96GE9 116 aa8.69□□□□□ -1.02
LINC00552-201ENST00000625151 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
LINC00552-201ENST00000625151 VPS13BQ7Z7G8 4022 aa8.68□□□□□ -1.02
LINC00552-201ENST00000625151 KRTAP10-1P60331 282 aa8.67□□□□□ -1.02
LINC00552-201ENST00000625151 RYR3Q15413 4870 aa8.67□□□□□ -1.02
LINC00552-201ENST00000625151 KRTAP16-1A8MUX0 517 aa8.67□□□□□ -1.02
LINC00552-201ENST00000625151 Q6ZSA8 131 aa8.67□□□□□ -1.02
LINC00552-201ENST00000625151 IGKV2-30P06310 120 aa8.66□□□□□ -1.02
LINC00552-201ENST00000625151 KRTAP1-4P0C5Y4 121 aa8.64□□□□□ -1.03
LINC00552-201ENST00000625151 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
LINC00552-201ENST00000625151 DYNC1H1Q14204 4646 aaKnown RBP8.62□□□□□ -1.03
LINC00552-201ENST00000625151 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
LINC00552-201ENST00000625151 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
LINC00552-201ENST00000625151 A0A1B0GU69 56 aa8.52□□□□□ -1.05
LINC00552-201ENST00000625151 A0A1B0GVY2 172 aa8.52□□□□□ -1.05
LINC00552-201ENST00000625151 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.05
LINC00552-201ENST00000625151 TYMSOSQ8TAI1 123 aa8.51□□□□□ -1.05
LINC00552-201ENST00000625151 SPINK1P00995 79 aa8.47□□□□□ -1.05
LINC00552-201ENST00000625151 FAT1Q14517 4588 aa8.46□□□□□ -1.06
LINC00552-201ENST00000625151 SPATA8Q6RVD6 105 aa8.41□□□□□ -1.06
LINC00552-201ENST00000625151 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
LINC00552-201ENST00000625151 Q8N1X5 172 aa8.38□□□□□ -1.07
LINC00552-201ENST00000625151 UQCR11O14957 56 aa8.37□□□□□ -1.07
LINC00552-201ENST00000625151 MIR22HGQ0VDD5 57 aa8.37□□□□□ -1.07
LINC00552-201ENST00000625151 EPPK1P58107 5090 aaKnown RBP8.35□□□□□ -1.07
LINC00552-201ENST00000625151 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
LINC00552-201ENST00000625151 CSAG1Q6PB30 78 aa8.34□□□□□ -1.07
LINC00552-201ENST00000625151 HSPG2P98160 4391 aa8.33□□□□□ -1.08
LINC00552-201ENST00000625151 RPS29P62273 56 aaKnown RBP8.33□□□□□ -1.08
LINC00552-201ENST00000625151 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
LINC00552-201ENST00000625151 C9orf92A6NGG3 77 aa8.28□□□□□ -1.08
LINC00552-201ENST00000625151 RYR1P21817 5038 aa8.25□□□□□ -1.09
LINC00552-201ENST00000625151 KIAA1109Q2LD37 5005 aa8.24□□□□□ -1.09
LINC00552-201ENST00000625151 A8MUU9 505 aa8.23□□□□□ -1.09
LINC00552-201ENST00000625151 C20orf166-AS1Q96NR2 134 aa8.23□□□□□ -1.09
LINC00552-201ENST00000625151 KRTAP10-4P60372 401 aaPredicted RBP8.22□□□□□ -1.09
LINC00552-201ENST00000625151 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.1
LINC00552-201ENST00000625151 KRTAP3-1Q9BYR8 98 aa8.19□□□□□ -1.1
LINC00552-201ENST00000625151 ROMO1P60602 79 aa8.18□□□□□ -1.1
LINC00552-201ENST00000625151 LRP1Q07954 4544 aaKnown RBP8.14□□□□□ -1.11
LINC00552-201ENST00000625151 H0YAA0 97 aa8.12□□□□□ -1.11
LINC00552-201ENST00000625151 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms