RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 IGKV4-1P06312 121 aa10.19□□□□□ -0.78
PTCHD3-202ENST00000622555 ASB16-AS1Q495Z4 193 aa10.16□□□□□ -0.78
PTCHD3-202ENST00000622555 Q8N9L7 120 aa10.14□□□□□ -0.79
PTCHD3-202ENST00000622555 DSCR10P59022 87 aa10.13□□□□□ -0.79
PTCHD3-202ENST00000622555 DEFB116Q30KQ4 102 aa10.13□□□□□ -0.79
PTCHD3-202ENST00000622555 SMIM20Q8N5G0 67 aa10.13□□□□□ -0.79
PTCHD3-202ENST00000622555 Q96NJ1 140 aa10.13□□□□□ -0.79
PTCHD3-202ENST00000622555 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
PTCHD3-202ENST00000622555 PCLOQ9Y6V0 5065 aa10.12□□□□□ -0.79
PTCHD3-202ENST00000622555 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
PTCHD3-202ENST00000622555 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
PTCHD3-202ENST00000622555 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
PTCHD3-202ENST00000622555 J3KT08 172 aa10.05□□□□□ -0.8
PTCHD3-202ENST00000622555 K7EQZ3 153 aa10.03□□□□□ -0.8
PTCHD3-202ENST00000622555 CYSTM1Q9H1C7 97 aa10.02□□□□□ -0.81
PTCHD3-202ENST00000622555 OCR1Q9BZK8 76 aa10.01□□□□□ -0.81
PTCHD3-202ENST00000622555 A8MWP4 228 aa9.98□□□□□ -0.81
PTCHD3-202ENST00000622555 NDUFB1O75438 58 aa9.97□□□□□ -0.81
PTCHD3-202ENST00000622555 FP248Q71RG6 208 aaPredicted RBP9.96□□□□□ -0.81
PTCHD3-202ENST00000622555 C20orf197Q8N268 126 aa9.96□□□□□ -0.82
PTCHD3-202ENST00000622555 PRR4Q16378 134 aa9.95□□□□□ -0.82
PTCHD3-202ENST00000622555 HCG22E2RYF7 251 aa9.94□□□□□ -0.82
PTCHD3-202ENST00000622555 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
PTCHD3-202ENST00000622555 IGHV6-1A0A0B4J1U7 121 aa9.93□□□□□ -0.82
PTCHD3-202ENST00000622555 A0A1B0GVX0 72 aa9.93□□□□□ -0.82
PTCHD3-202ENST00000622555 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
PTCHD3-202ENST00000622555 IGLV7-46A0A075B6I9 117 aa9.92□□□□□ -0.82
PTCHD3-202ENST00000622555 TMEM258P61165 79 aa9.9□□□□□ -0.83
PTCHD3-202ENST00000622555 TMEM254Q8TBM7 123 aa9.86□□□□□ -0.83
PTCHD3-202ENST00000622555 H7BZZ5 65 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 NOTCH2NLQ7Z3S9 236 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 C8orf17Q9NRJ1 99 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 A0A0U1RQV1 116 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 C9orf92A6NGG3 77 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 C8orf87E5RJ46 101 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 LINC00313P59037 77 aa9.85□□□□□ -0.83
PTCHD3-202ENST00000622555 SNURFQ9Y675 71 aa9.84□□□□□ -0.83
PTCHD3-202ENST00000622555 MMP24-AS1A0A0U1RRL7 71 aa9.82□□□□□ -0.84
PTCHD3-202ENST00000622555 NDUFC1O43677 76 aa9.82□□□□□ -0.84
PTCHD3-202ENST00000622555 WFDC13Q8IUB5 93 aa9.82□□□□□ -0.84
PTCHD3-202ENST00000622555 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
PTCHD3-202ENST00000622555 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
PTCHD3-202ENST00000622555 hDV103S1A0JD37 113 aa9.78□□□□□ -0.84
PTCHD3-202ENST00000622555 C5orf47Q569G3 176 aa9.78□□□□□ -0.84
PTCHD3-202ENST00000622555 TPRXLQ17RH7 258 aa9.77□□□□□ -0.85
PTCHD3-202ENST00000622555 HERC1Q15751 4861 aa9.77□□□□□ -0.85
PTCHD3-202ENST00000622555 ZCCHC13Q8WW36 166 aaKnown RBP9.76□□□□□ -0.85
PTCHD3-202ENST00000622555 RPS28P62857 69 aaKnown RBP9.76□□□□□ -0.85
PTCHD3-202ENST00000622555 KRTAP16-1A8MUX0 517 aa9.74□□□□□ -0.85
PTCHD3-202ENST00000622555 FAM236DA0A1B0GTK5 79 aa9.72□□□□□ -0.85
PTCHD3-202ENST00000622555 FAM236CP0DP71 79 aa9.72□□□□□ -0.85
PTCHD3-202ENST00000622555 MRPL34Q9BQ48 92 aaKnown RBP9.71□□□□□ -0.85
PTCHD3-202ENST00000622555 XP32Q5T750 250 aa9.68□□□□□ -0.86
PTCHD3-202ENST00000622555 NDUFS5O43920 106 aa9.66□□□□□ -0.86
PTCHD3-202ENST00000622555 ATP5EP56381 51 aaPredicted RBP9.66□□□□□ -0.86
PTCHD3-202ENST00000622555 H3BPC8 53 aa9.65□□□□□ -0.86
PTCHD3-202ENST00000622555 MP68P56378 58 aa9.65□□□□□ -0.87
PTCHD3-202ENST00000622555 Q8N9P0 234 aaPredicted RBP9.65□□□□□ -0.87
PTCHD3-202ENST00000622555 C20orf166-AS1Q96NR2 134 aa9.65□□□□□ -0.87
PTCHD3-202ENST00000622555 TP53AIP1Q9HCN2 124 aa9.64□□□□□ -0.87
PTCHD3-202ENST00000622555 A8MUU9 505 aa9.63□□□□□ -0.87
PTCHD3-202ENST00000622555 LPAP08519 4548 aa9.63□□□□□ -0.87
PTCHD3-202ENST00000622555 H0Y9P7 68 aa9.62□□□□□ -0.87
PTCHD3-202ENST00000622555 Q75L30 129 aa9.62□□□□□ -0.87
PTCHD3-202ENST00000622555 HMCN2Q8NDA2 5059 aa9.61□□□□□ -0.87
PTCHD3-202ENST00000622555 SERP1Q9Y6X1 66 aa9.6□□□□□ -0.87
PTCHD3-202ENST00000622555 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
PTCHD3-202ENST00000622555 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
PTCHD3-202ENST00000622555 TRAV22A0A0B4J277 110 aa9.57□□□□□ -0.88
PTCHD3-202ENST00000622555 LRP2P98164 4655 aa9.54□□□□□ -0.88
PTCHD3-202ENST00000622555 C1orf64Q8NEQ6 169 aa9.53□□□□□ -0.88
PTCHD3-202ENST00000622555 ATP11AUNQ6ZP68 121 aa9.52□□□□□ -0.89
PTCHD3-202ENST00000622555 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
PTCHD3-202ENST00000622555 Q5W150 140 aa9.48□□□□□ -0.89
PTCHD3-202ENST00000622555 PCOTHQ58A44 107 aa9.47□□□□□ -0.89
PTCHD3-202ENST00000622555 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
PTCHD3-202ENST00000622555 SEC61BP60468 96 aaKnown RBP9.46□□□□□ -0.89
PTCHD3-202ENST00000622555 SMIM26A0A096LP01 95 aa9.39□□□□□ -0.91
PTCHD3-202ENST00000622555 LOC101927531A0A1B0GV80 90 aa9.37□□□□□ -0.91
PTCHD3-202ENST00000622555 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
PTCHD3-202ENST00000622555 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
PTCHD3-202ENST00000622555 C4orf26Q17RF5 130 aa9.32□□□□□ -0.92
PTCHD3-202ENST00000622555 MUC17Q685J3 4493 aa9.31□□□□□ -0.92
PTCHD3-202ENST00000622555 SPINK7P58062 85 aa9.3□□□□□ -0.92
PTCHD3-202ENST00000622555 C7orf65Q6ZTY9 151 aa9.29□□□□□ -0.92
PTCHD3-202ENST00000622555 KRTAP4-1Q9BYQ7 146 aa9.25□□□□□ -0.93
PTCHD3-202ENST00000622555 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
PTCHD3-202ENST00000622555 PRO0628Q9UI54 55 aa9.18□□□□□ -0.94
PTCHD3-202ENST00000622555 COA5Q86WW8 74 aa9.17□□□□□ -0.94
PTCHD3-202ENST00000622555 HRES1P13985 223 aa9.16□□□□□ -0.94
PTCHD3-202ENST00000622555 Q1T7F1 81 aa9.16□□□□□ -0.94
PTCHD3-202ENST00000622555 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
PTCHD3-202ENST00000622555 RNF213Q63HN8 5207 aa9.11□□□□□ -0.95
PTCHD3-202ENST00000622555 DMAC1Q96GE9 116 aa9.09□□□□□ -0.95
PTCHD3-202ENST00000622555 MUC2Q02817 5179 aa9.07□□□□□ -0.96
PTCHD3-202ENST00000622555 RBM12B-AS1Q9P1G2 102 aa9.06□□□□□ -0.96
PTCHD3-202ENST00000622555 V9GYY9 64 aa9.05□□□□□ -0.96
PTCHD3-202ENST00000622555 ACYP2P14621 99 aa9.05□□□□□ -0.96
PTCHD3-202ENST00000622555 COX6B2Q6YFQ2 88 aa9.01□□□□□ -0.97
PTCHD3-202ENST00000622555 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms