RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 IGKV4-1P06312 121 aa8.26□□□□□ -1.09
CLTCL1-212ENST00000622493 SPAG11AQ6PDA7 123 aa8.26□□□□□ -1.09
CLTCL1-212ENST00000622493 SPINK1P00995 79 aa8.26□□□□□ -1.09
CLTCL1-212ENST00000622493 PKHD1L1Q86WI1 4243 aa8.25□□□□□ -1.09
CLTCL1-212ENST00000622493 FP248Q71RG6 208 aaPredicted RBP8.25□□□□□ -1.09
CLTCL1-212ENST00000622493 BIRC6Q9NR09 4857 aa8.24□□□□□ -1.09
CLTCL1-212ENST00000622493 LINC00304Q8N9R0 145 aa8.24□□□□□ -1.09
CLTCL1-212ENST00000622493 OCR1Q9BZK8 76 aa8.24□□□□□ -1.09
CLTCL1-212ENST00000622493 A0A0U1RQV1 116 aa8.23□□□□□ -1.09
CLTCL1-212ENST00000622493 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
CLTCL1-212ENST00000622493 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
CLTCL1-212ENST00000622493 KRTAP10-8P60410 259 aa8.22□□□□□ -1.09
CLTCL1-212ENST00000622493 ASB16-AS1Q495Z4 193 aa8.22□□□□□ -1.09
CLTCL1-212ENST00000622493 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.09
CLTCL1-212ENST00000622493 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
CLTCL1-212ENST00000622493 Q8N9L7 120 aa8.17□□□□□ -1.1
CLTCL1-212ENST00000622493 Q96NJ1 140 aa8.17□□□□□ -1.1
CLTCL1-212ENST00000622493 FLG2Q5D862 2391 aaPredicted RBP8.15□□□□□ -1.1
CLTCL1-212ENST00000622493 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.11
CLTCL1-212ENST00000622493 DEFB116Q30KQ4 102 aa8.14□□□□□ -1.11
CLTCL1-212ENST00000622493 DSCR10P59022 87 aa8.12□□□□□ -1.11
CLTCL1-212ENST00000622493 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
CLTCL1-212ENST00000622493 SEC61GP60059 68 aa8.12□□□□□ -1.11
CLTCL1-212ENST00000622493 C1orf195Q5TG92 126 aa8.12□□□□□ -1.11
CLTCL1-212ENST00000622493 HERC2O95714 4834 aa8.11□□□□□ -1.11
CLTCL1-212ENST00000622493 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
CLTCL1-212ENST00000622493 FAT3Q8TDW7 4589 aa8.1□□□□□ -1.11
CLTCL1-212ENST00000622493 A8MWP4 228 aa8.1□□□□□ -1.11
CLTCL1-212ENST00000622493 NDUFB1O75438 58 aa8.09□□□□□ -1.11
CLTCL1-212ENST00000622493 TNXBP22105 4242 aa8.07□□□□□ -1.12
CLTCL1-212ENST00000622493 K7EQZ3 153 aa8.07□□□□□ -1.12
CLTCL1-212ENST00000622493 BRK1Q8WUW1 75 aa8.07□□□□□ -1.12
CLTCL1-212ENST00000622493 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
CLTCL1-212ENST00000622493 PRR15Q8IV56 129 aa8.06□□□□□ -1.12
CLTCL1-212ENST00000622493 MPLKIPQ8TAP9 179 aa8.06□□□□□ -1.12
CLTCL1-212ENST00000622493 hDV103S1A0JD37 113 aa8.06□□□□□ -1.12
CLTCL1-212ENST00000622493 ZCCHC13Q8WW36 166 aaKnown RBP8.06□□□□□ -1.12
CLTCL1-212ENST00000622493 A0A1B0GVX0 72 aa8.03□□□□□ -1.12
CLTCL1-212ENST00000622493 Q1T7F1 81 aa8.03□□□□□ -1.12
CLTCL1-212ENST00000622493 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
CLTCL1-212ENST00000622493 DMBT1Q9UGM3 2413 aaPredicted RBP8.01□□□□□ -1.13
CLTCL1-212ENST00000622493 HCG22E2RYF7 251 aa8□□□□□ -1.13
CLTCL1-212ENST00000622493 ABCA13Q86UQ4 5058 aa8□□□□□ -1.13
CLTCL1-212ENST00000622493 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
CLTCL1-212ENST00000622493 C1orf64Q8NEQ6 169 aa7.99□□□□□ -1.13
CLTCL1-212ENST00000622493 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
CLTCL1-212ENST00000622493 J3QL48 77 aa7.98□□□□□ -1.13
CLTCL1-212ENST00000622493 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
CLTCL1-212ENST00000622493 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
CLTCL1-212ENST00000622493 MMP24-AS1A0A0U1RRL7 71 aa7.95□□□□□ -1.14
CLTCL1-212ENST00000622493 MP68P56378 58 aa7.95□□□□□ -1.14
CLTCL1-212ENST00000622493 V9GYY9 64 aa7.95□□□□□ -1.14
CLTCL1-212ENST00000622493 LINC00313P59037 77 aa7.94□□□□□ -1.14
CLTCL1-212ENST00000622493 H3BPC8 53 aa7.93□□□□□ -1.14
CLTCL1-212ENST00000622493 CASC2Q6XLA1 102 aa7.93□□□□□ -1.14
CLTCL1-212ENST00000622493 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
CLTCL1-212ENST00000622493 NOTCH2NLQ7Z3S9 236 aa7.92□□□□□ -1.14
CLTCL1-212ENST00000622493 TRAV22A0A0B4J277 110 aa7.9□□□□□ -1.14
CLTCL1-212ENST00000622493 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
CLTCL1-212ENST00000622493 MRPL34Q9BQ48 92 aaKnown RBP7.88□□□□□ -1.15
CLTCL1-212ENST00000622493 IGLV7-46A0A075B6I9 117 aa7.86□□□□□ -1.15
CLTCL1-212ENST00000622493 LINC00208Q96KT6 92 aa7.85□□□□□ -1.15
CLTCL1-212ENST00000622493 KRTAP16-1A8MUX0 517 aa7.83□□□□□ -1.16
CLTCL1-212ENST00000622493 H0Y9P7 68 aa7.83□□□□□ -1.16
CLTCL1-212ENST00000622493 PRR4Q16378 134 aa7.83□□□□□ -1.16
CLTCL1-212ENST00000622493 Q8N9P0 234 aaPredicted RBP7.82□□□□□ -1.16
CLTCL1-212ENST00000622493 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
CLTCL1-212ENST00000622493 PSPHP1O15172 72 aa7.81□□□□□ -1.16
CLTCL1-212ENST00000622493 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CLTCL1-212ENST00000622493 PCLOQ9Y6V0 5065 aa7.8□□□□□ -1.16
CLTCL1-212ENST00000622493 PMAIP1Q13794 54 aa7.79□□□□□ -1.16
CLTCL1-212ENST00000622493 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
CLTCL1-212ENST00000622493 NDUFS5O43920 106 aa7.78□□□□□ -1.16
CLTCL1-212ENST00000622493 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
CLTCL1-212ENST00000622493 A8MUN3 132 aa7.77□□□□□ -1.17
CLTCL1-212ENST00000622493 Q5VV11 94 aa7.75□□□□□ -1.17
CLTCL1-212ENST00000622493 C20orf166-AS1Q96NR2 134 aa7.75□□□□□ -1.17
CLTCL1-212ENST00000622493 A8MUU9 505 aa7.74□□□□□ -1.17
CLTCL1-212ENST00000622493 Q75L30 129 aa7.72□□□□□ -1.17
CLTCL1-212ENST00000622493 XP32Q5T750 250 aa7.7□□□□□ -1.18
CLTCL1-212ENST00000622493 CHKB-CPT1BH3BT56 60 aa7.69□□□□□ -1.18
CLTCL1-212ENST00000622493 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
CLTCL1-212ENST00000622493 LOC101927531A0A1B0GV80 90 aa7.67□□□□□ -1.18
CLTCL1-212ENST00000622493 COA5Q86WW8 74 aa7.67□□□□□ -1.18
CLTCL1-212ENST00000622493 Q5W150 140 aa7.66□□□□□ -1.18
CLTCL1-212ENST00000622493 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
CLTCL1-212ENST00000622493 ATP11AUNQ6ZP68 121 aa7.63□□□□□ -1.19
CLTCL1-212ENST00000622493 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
CLTCL1-212ENST00000622493 A6NED7 52 aa7.59□□□□□ -1.19
CLTCL1-212ENST00000622493 CDC42SE1Q9NRR8 79 aa7.58□□□□□ -1.2
CLTCL1-212ENST00000622493 PCOTHQ58A44 107 aa7.57□□□□□ -1.2
CLTCL1-212ENST00000622493 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
CLTCL1-212ENST00000622493 HERC1Q15751 4861 aa7.57□□□□□ -1.2
CLTCL1-212ENST00000622493 LPAP08519 4548 aa7.56□□□□□ -1.2
CLTCL1-212ENST00000622493 A8MU10 97 aa7.56□□□□□ -1.2
CLTCL1-212ENST00000622493 LCA10Q71F78 164 aa7.55□□□□□ -1.2
CLTCL1-212ENST00000622493 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
CLTCL1-212ENST00000622493 SPTSSBQ8NFR3 76 aa7.53□□□□□ -1.2
CLTCL1-212ENST00000622493 LRP2P98164 4655 aa7.52□□□□□ -1.21
CLTCL1-212ENST00000622493 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms