RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 SPINK6Q6UWN8 80 aa13.09□□□□□ -0.31
PCSK6-220ENST00000622483 KMT2AQ03164 3969 aa13.09□□□□□ -0.31
PCSK6-220ENST00000622483 TP53AIP1Q9HCN2 124 aa13.08□□□□□ -0.31
PCSK6-220ENST00000622483 Q6ZR54 194 aa13.06□□□□□ -0.32
PCSK6-220ENST00000622483 RETNLBQ9BQ08 111 aa13.06□□□□□ -0.32
PCSK6-220ENST00000622483 CDK2AP2O75956 126 aa13.04□□□□□ -0.32
PCSK6-220ENST00000622483 Q5W150 140 aa13.04□□□□□ -0.32
PCSK6-220ENST00000622483 PANO1I0J062 215 aa13.03□□□□□ -0.32
PCSK6-220ENST00000622483 MRPL34Q9BQ48 92 aaKnown RBP13.02□□□□□ -0.33
PCSK6-220ENST00000622483 SPRR1BP22528 89 aa13.01□□□□□ -0.33
PCSK6-220ENST00000622483 APLNQ9ULZ1 77 aa13.01□□□□□ -0.33
PCSK6-220ENST00000622483 A0A1B0GVX0 72 aa13□□□□□ -0.33
PCSK6-220ENST00000622483 H3BS24 57 aa12.99□□□□□ -0.33
PCSK6-220ENST00000622483 ASB16-AS1Q495Z4 193 aa12.97□□□□□ -0.33
PCSK6-220ENST00000622483 LINC01554Q52M75 96 aa12.96□□□□□ -0.34
PCSK6-220ENST00000622483 FRAS1Q86XX4 4008 aa12.92□□□□□ -0.34
PCSK6-220ENST00000622483 A0A1B0GU69 56 aa12.91□□□□□ -0.34
PCSK6-220ENST00000622483 LY6G6CO95867 125 aa12.88□□□□□ -0.35
PCSK6-220ENST00000622483 ACYP2P14621 99 aa12.86□□□□□ -0.35
PCSK6-220ENST00000622483 NUPR2A6NF83 97 aa12.85□□□□□ -0.35
PCSK6-220ENST00000622483 PLA2G1BP04054 148 aaKnown RBP12.84□□□□□ -0.35
PCSK6-220ENST00000622483 CSAG1Q6PB30 78 aa12.83□□□□□ -0.36
PCSK6-220ENST00000622483 VPS13DQ5THJ4 4388 aa12.82□□□□□ -0.36
PCSK6-220ENST00000622483 NBDYA0A0U1RRE5 68 aa12.79□□□□□ -0.36
PCSK6-220ENST00000622483 MIR22HGQ0VDD5 57 aa12.78□□□□□ -0.36
PCSK6-220ENST00000622483 KRTAP13-1Q8IUC0 172 aa12.77□□□□□ -0.36
PCSK6-220ENST00000622483 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.77□□□□□ -0.36
PCSK6-220ENST00000622483 RTL8CO15255 209 aa12.76□□□□□ -0.37
PCSK6-220ENST00000622483 DNAH2Q9P225 4427 aa12.76□□□□□ -0.37
PCSK6-220ENST00000622483 HYDINQ4G0P3 5121 aa12.76□□□□□ -0.37
PCSK6-220ENST00000622483 WWC2-AS2Q96NR7 200 aa12.73□□□□□ -0.37
PCSK6-220ENST00000622483 ALMS1Q8TCU4 4167 aa12.72□□□□□ -0.37
PCSK6-220ENST00000622483 CIRBP-AS1Q8TBR5 109 aa12.72□□□□□ -0.37
PCSK6-220ENST00000622483 FLG2Q5D862 2391 aaPredicted RBP12.71□□□□□ -0.38
PCSK6-220ENST00000622483 DYNC2H1Q8NCM8 4307 aaKnown RBP12.7□□□□□ -0.38
PCSK6-220ENST00000622483 SPATA8Q6RVD6 105 aa12.69□□□□□ -0.38
PCSK6-220ENST00000622483 KRTAP13-3Q3SY46 172 aa12.68□□□□□ -0.38
PCSK6-220ENST00000622483 UQCR11O14957 56 aa12.67□□□□□ -0.38
PCSK6-220ENST00000622483 DMAC1Q96GE9 116 aa12.66□□□□□ -0.38
PCSK6-220ENST00000622483 SPINK1P00995 79 aa12.65□□□□□ -0.38
PCSK6-220ENST00000622483 DNAH8Q96JB1 4490 aa12.64□□□□□ -0.39
PCSK6-220ENST00000622483 PSORS1C2Q9UIG4 136 aa12.63□□□□□ -0.39
PCSK6-220ENST00000622483 C14orf177Q52M58 125 aa12.61□□□□□ -0.39
PCSK6-220ENST00000622483 DNAH6Q9C0G6 4158 aa12.6□□□□□ -0.39
PCSK6-220ENST00000622483 IGKV2D-30A0A075B6S6 120 aa12.6□□□□□ -0.39
PCSK6-220ENST00000622483 IGKV2-30P06310 120 aa12.6□□□□□ -0.39
PCSK6-220ENST00000622483 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
PCSK6-220ENST00000622483 LINC00483Q53H64 154 aa12.57□□□□□ -0.4
PCSK6-220ENST00000622483 KRTAP21-3Q3LHN1 58 aa12.53□□□□□ -0.4
PCSK6-220ENST00000622483 A0A087WTM6 91 aa12.53□□□□□ -0.4
PCSK6-220ENST00000622483 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
PCSK6-220ENST00000622483 SPACA4Q8TDM5 124 aa12.51□□□□□ -0.41
PCSK6-220ENST00000622483 ZNF706Q9Y5V0 76 aaPredicted RBP12.5□□□□□ -0.41
PCSK6-220ENST00000622483 HECTD4Q9Y4D8 3996 aa12.48□□□□□ -0.41
PCSK6-220ENST00000622483 DNAH11Q96DT5 4516 aa12.48□□□□□ -0.41
PCSK6-220ENST00000622483 KMT2CQ8NEZ4 4911 aaKnown RBP12.48□□□□□ -0.41
PCSK6-220ENST00000622483 DNAH17Q9UFH2 4485 aa12.46□□□□□ -0.41
PCSK6-220ENST00000622483 ZNF861PO60384 105 aa12.46□□□□□ -0.42
PCSK6-220ENST00000622483 IGLV5-52A0A0A0MRZ9 124 aa12.45□□□□□ -0.42
PCSK6-220ENST00000622483 KRTAP10-2P60368 255 aa12.44□□□□□ -0.42
PCSK6-220ENST00000622483 FAM229AH3BQW9 127 aa12.42□□□□□ -0.42
PCSK6-220ENST00000622483 CRIPTQ9P021 101 aa12.42□□□□□ -0.42
PCSK6-220ENST00000622483 PKHD1P08F94 4074 aa12.41□□□□□ -0.42
PCSK6-220ENST00000622483 Q8N1X5 172 aa12.4□□□□□ -0.42
PCSK6-220ENST00000622483 SACSQ9NZJ4 4579 aa12.37□□□□□ -0.43
PCSK6-220ENST00000622483 IGLV7-43P04211 117 aa12.31□□□□□ -0.44
PCSK6-220ENST00000622483 DNAH5Q8TE73 4624 aa12.28□□□□□ -0.44
PCSK6-220ENST00000622483 FAT2Q9NYQ8 4349 aa12.26□□□□□ -0.45
PCSK6-220ENST00000622483 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
PCSK6-220ENST00000622483 DMBT1Q9UGM3 2413 aaPredicted RBP12.22□□□□□ -0.45
PCSK6-220ENST00000622483 H0YAA0 97 aa12.2□□□□□ -0.46
PCSK6-220ENST00000622483 KRTAP10-1P60331 282 aa12.19□□□□□ -0.46
PCSK6-220ENST00000622483 Q6ZSA8 131 aa12.18□□□□□ -0.46
PCSK6-220ENST00000622483 LINC00304Q8N9R0 145 aa12.17□□□□□ -0.46
PCSK6-220ENST00000622483 TYMSOSQ8TAI1 123 aa12.17□□□□□ -0.46
PCSK6-220ENST00000622483 KRTAP25-1Q3LHN0 102 aa12.16□□□□□ -0.46
PCSK6-220ENST00000622483 KRTAP16-1A8MUX0 517 aa12.15□□□□□ -0.46
PCSK6-220ENST00000622483 ROMO1P60602 79 aa12.15□□□□□ -0.46
PCSK6-220ENST00000622483 PKD1P98161 4303 aa12.15□□□□□ -0.47
PCSK6-220ENST00000622483 A8MUU9 505 aa12.13□□□□□ -0.47
PCSK6-220ENST00000622483 SMR3BP02814 79 aaPredicted RBP12.1□□□□□ -0.47
PCSK6-220ENST00000622483 KRTAP13-2Q52LG2 175 aa12.09□□□□□ -0.47
PCSK6-220ENST00000622483 SSBP3-AS1Q7Z2R9 100 aa12.09□□□□□ -0.47
PCSK6-220ENST00000622483 FAT1Q14517 4588 aa12.08□□□□□ -0.48
PCSK6-220ENST00000622483 RYR3Q15413 4870 aa12.07□□□□□ -0.48
PCSK6-220ENST00000622483 RYR2Q92736 4967 aa12.04□□□□□ -0.48
PCSK6-220ENST00000622483 VPS13BQ7Z7G8 4022 aa12.02□□□□□ -0.49
PCSK6-220ENST00000622483 A0A1B0GU33 70 aa11.99□□□□□ -0.49
PCSK6-220ENST00000622483 DYNC1H1Q14204 4646 aaKnown RBP11.98□□□□□ -0.49
PCSK6-220ENST00000622483 P0C880 135 aa11.94□□□□□ -0.5
PCSK6-220ENST00000622483 H1FX-AS1Q4G0G2 97 aa11.84□□□□□ -0.51
PCSK6-220ENST00000622483 C9orf92A6NGG3 77 aa11.82□□□□□ -0.52
PCSK6-220ENST00000622483 APOBP04114 4563 aaKnown RBP11.77□□□□□ -0.53
PCSK6-220ENST00000622483 KRTAP3-1Q9BYR8 98 aa11.76□□□□□ -0.53
PCSK6-220ENST00000622483 KIAA1109Q2LD37 5005 aa11.75□□□□□ -0.53
PCSK6-220ENST00000622483 SPINT4Q6UDR6 99 aa11.74□□□□□ -0.53
PCSK6-220ENST00000622483 EPPK1P58107 5090 aaKnown RBP11.71□□□□□ -0.53
PCSK6-220ENST00000622483 A0A0D9SG42 100 aa11.71□□□□□ -0.53
PCSK6-220ENST00000622483 K7ERS5 55 aa11.71□□□□□ -0.53
PCSK6-220ENST00000622483 KRTAP1-4P0C5Y4 121 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms