RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 NOTCH2NLQ7Z3S9 236 aa12.32□□□□□ -0.44
PCSK6-217ENST00000618548 WWC2-AS2Q96NR7 200 aa12.32□□□□□ -0.44
PCSK6-217ENST00000618548 A6NN06 94 aa12.32□□□□□ -0.44
PCSK6-217ENST00000618548 KMT2BQ9UMN6 2715 aaPredicted RBP12.3□□□□□ -0.44
PCSK6-217ENST00000618548 Q5W150 140 aa12.29□□□□□ -0.44
PCSK6-217ENST00000618548 BSNQ9UPA5 3926 aa12.28□□□□□ -0.44
PCSK6-217ENST00000618548 CSMD2Q7Z408 3487 aa12.25□□□□□ -0.45
PCSK6-217ENST00000618548 DMBT1Q9UGM3 2413 aaPredicted RBP12.25□□□□□ -0.45
PCSK6-217ENST00000618548 TENM1Q9UKZ4 2725 aa12.24□□□□□ -0.45
PCSK6-217ENST00000618548 CSAG1Q6PB30 78 aa12.21□□□□□ -0.46
PCSK6-217ENST00000618548 PDZD2O15018 2839 aa12.19□□□□□ -0.46
PCSK6-217ENST00000618548 DMAC1Q96GE9 116 aa12.16□□□□□ -0.46
PCSK6-217ENST00000618548 C9orf92A6NGG3 77 aa12.15□□□□□ -0.46
PCSK6-217ENST00000618548 PKD1L1Q8TDX9 2849 aa12.13□□□□□ -0.47
PCSK6-217ENST00000618548 H3BS24 57 aa12.13□□□□□ -0.47
PCSK6-217ENST00000618548 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
PCSK6-217ENST00000618548 LINC00483Q53H64 154 aa12.12□□□□□ -0.47
PCSK6-217ENST00000618548 ADM2Q7Z4H4 148 aa12.12□□□□□ -0.47
PCSK6-217ENST00000618548 SPINT4Q6UDR6 99 aa12.11□□□□□ -0.47
PCSK6-217ENST00000618548 LINC00304Q8N9R0 145 aa12.06□□□□□ -0.48
PCSK6-217ENST00000618548 A0A1B0GU33 70 aa12.03□□□□□ -0.48
PCSK6-217ENST00000618548 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
PCSK6-217ENST00000618548 SPATA8Q6RVD6 105 aa11.99□□□□□ -0.49
PCSK6-217ENST00000618548 KRTAP13-1Q8IUC0 172 aa11.99□□□□□ -0.49
PCSK6-217ENST00000618548 TENM4Q6N022 2769 aa11.99□□□□□ -0.49
PCSK6-217ENST00000618548 CRIPTQ9P021 101 aa11.94□□□□□ -0.5
PCSK6-217ENST00000618548 A0A0D9SG42 100 aa11.94□□□□□ -0.5
PCSK6-217ENST00000618548 ZFHX3Q15911 3703 aa11.94□□□□□ -0.5
PCSK6-217ENST00000618548 SMR3BP02814 79 aaPredicted RBP11.93□□□□□ -0.5
PCSK6-217ENST00000618548 VPS13CQ709C8 3753 aa11.93□□□□□ -0.5
PCSK6-217ENST00000618548 ASB16-AS1Q495Z4 193 aa11.85□□□□□ -0.51
PCSK6-217ENST00000618548 Q6ZRN7 208 aaPredicted RBP11.84□□□□□ -0.51
PCSK6-217ENST00000618548 OTOGQ6ZRI0 2925 aa11.83□□□□□ -0.52
PCSK6-217ENST00000618548 SRRM2Q9UQ35 2752 aaKnown RBP11.83□□□□□ -0.52
PCSK6-217ENST00000618548 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
PCSK6-217ENST00000618548 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
PCSK6-217ENST00000618548 KRTAP10-2P60368 255 aa11.73□□□□□ -0.53
PCSK6-217ENST00000618548 TGP01266 2768 aa11.71□□□□□ -0.54
PCSK6-217ENST00000618548 KRTAP10-1P60331 282 aa11.64□□□□□ -0.55
PCSK6-217ENST00000618548 H1FX-AS1Q4G0G2 97 aa11.63□□□□□ -0.55
PCSK6-217ENST00000618548 KRTAP13-2Q52LG2 175 aa11.62□□□□□ -0.55
PCSK6-217ENST00000618548 TRRAPQ9Y4A5 3859 aa11.61□□□□□ -0.55
PCSK6-217ENST00000618548 KRTAP25-1Q3LHN0 102 aa11.54□□□□□ -0.56
PCSK6-217ENST00000618548 RPL37P61927 97 aaKnown RBP11.49□□□□□ -0.57
PCSK6-217ENST00000618548 ROMO1P60602 79 aa11.48□□□□□ -0.57
PCSK6-217ENST00000618548 Q6ZSA8 131 aa11.39□□□□□ -0.59
PCSK6-217ENST00000618548 KRTAP13-3Q3SY46 172 aa11.39□□□□□ -0.59
PCSK6-217ENST00000618548 COX6B2Q6YFQ2 88 aa11.37□□□□□ -0.59
PCSK6-217ENST00000618548 ANK3Q12955 4377 aaKnown RBP11.35□□□□□ -0.59
PCSK6-217ENST00000618548 ZNF469Q96JG9 3925 aaPredicted RBP11.32□□□□□ -0.6
PCSK6-217ENST00000618548 FBN3Q75N90 2809 aa11.31□□□□□ -0.6
PCSK6-217ENST00000618548 S4R3F8 94 aa11.3□□□□□ -0.6
PCSK6-217ENST00000618548 COL7A1Q02388 2944 aa11.29□□□□□ -0.6
PCSK6-217ENST00000618548 H0YAA0 97 aa11.27□□□□□ -0.61
PCSK6-217ENST00000618548 A8MUU9 505 aa11.26□□□□□ -0.61
PCSK6-217ENST00000618548 KRTAP16-1A8MUX0 517 aa11.25□□□□□ -0.61
PCSK6-217ENST00000618548 KRTAP1-4P0C5Y4 121 aa11.17□□□□□ -0.62
PCSK6-217ENST00000618548 AKAP9Q99996 3911 aa11.14□□□□□ -0.63
PCSK6-217ENST00000618548 CSMD3Q7Z407 3707 aa11.1□□□□□ -0.63
PCSK6-217ENST00000618548 RPS29P62273 56 aaKnown RBP11.09□□□□□ -0.63
PCSK6-217ENST00000618548 NDUFAF8A1L188 74 aa11.07□□□□□ -0.64
PCSK6-217ENST00000618548 C20orf166-AS1Q96NR2 134 aa11.03□□□□□ -0.64
PCSK6-217ENST00000618548 LUZP6Q538Z0 58 aa11.02□□□□□ -0.64
PCSK6-217ENST00000618548 MEGF8Q7Z7M0 2845 aa11.02□□□□□ -0.65
PCSK6-217ENST00000618548 C10orf95Q9H7T3 257 aa10.97□□□□□ -0.65
PCSK6-217ENST00000618548 R4GN34 69 aa10.97□□□□□ -0.65
PCSK6-217ENST00000618548 CAMK2N1Q7Z7J9 78 aa10.91□□□□□ -0.66
PCSK6-217ENST00000618548 M0QZ58 72 aa10.9□□□□□ -0.66
PCSK6-217ENST00000618548 Q5VSD8 79 aa10.78□□□□□ -0.68
PCSK6-217ENST00000618548 KRTAP21-3Q3LHN1 58 aa10.72□□□□□ -0.69
PCSK6-217ENST00000618548 KRTAP3-1Q9BYR8 98 aa10.68□□□□□ -0.7
PCSK6-217ENST00000618548 J3QL48 77 aa10.67□□□□□ -0.7
PCSK6-217ENST00000618548 A0A0A0MQY5 61 aa10.66□□□□□ -0.7
PCSK6-217ENST00000618548 P0C880 135 aa10.66□□□□□ -0.7
PCSK6-217ENST00000618548 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
PCSK6-217ENST00000618548 TPRXLQ17RH7 258 aa10.51□□□□□ -0.73
PCSK6-217ENST00000618548 XP32Q5T750 250 aa10.5□□□□□ -0.73
PCSK6-217ENST00000618548 DNAH10Q8IVF4 4471 aa10.47□□□□□ -0.73
PCSK6-217ENST00000618548 SEC61BP60468 96 aaKnown RBP10.42□□□□□ -0.74
PCSK6-217ENST00000618548 KRTAP12-2P59991 146 aa10.39□□□□□ -0.75
PCSK6-217ENST00000618548 KRTAP13-4Q3LI77 160 aa10.39□□□□□ -0.75
PCSK6-217ENST00000618548 PLAC4Q8WY50 150 aa10.36□□□□□ -0.75
PCSK6-217ENST00000618548 KRTAP10-6P60371 365 aaPredicted RBP10.33□□□□□ -0.76
PCSK6-217ENST00000618548 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
PCSK6-217ENST00000618548 KRTAP12-1P59990 96 aa10.23□□□□□ -0.77
PCSK6-217ENST00000618548 M0R2T5 61 aa10.22□□□□□ -0.77
PCSK6-217ENST00000618548 PLECQ15149 4684 aaKnown RBP10.16□□□□□ -0.78
PCSK6-217ENST00000618548 DNAH9Q9NYC9 4486 aa10.07□□□□□ -0.8
PCSK6-217ENST00000618548 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
PCSK6-217ENST00000618548 DNAH1Q9P2D7 4330 aa10.07□□□□□ -0.8
PCSK6-217ENST00000618548 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
PCSK6-217ENST00000618548 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.81
PCSK6-217ENST00000618548 PP632Q6XCG6 107 aa10.02□□□□□ -0.81
PCSK6-217ENST00000618548 TNP1P09430 55 aa10.01□□□□□ -0.81
PCSK6-217ENST00000618548 A0A1B0GVY2 172 aa9.99□□□□□ -0.81
PCSK6-217ENST00000618548 KRTAP15-1Q3LI76 137 aa9.99□□□□□ -0.81
PCSK6-217ENST00000618548 DNAH8Q96JB1 4490 aa9.97□□□□□ -0.81
PCSK6-217ENST00000618548 ANK2Q01484 3957 aa9.96□□□□□ -0.82
PCSK6-217ENST00000618548 ALMS1Q8TCU4 4167 aa9.86□□□□□ -0.83
PCSK6-217ENST00000618548 LYSTQ99698 3801 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms