RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 A0A1B0GVX0 72 aa6.5□□□□□ -1.37
TARDBP-217ENST00000616545 C8orf87E5RJ46 101 aa6.5□□□□□ -1.37
TARDBP-217ENST00000616545 DSCR10P59022 87 aa6.5□□□□□ -1.37
TARDBP-217ENST00000616545 PRR15Q8IV56 129 aa6.5□□□□□ -1.37
TARDBP-217ENST00000616545 IGKV3D-7A0A0C4DH55 119 aa6.48□□□□□ -1.37
TARDBP-217ENST00000616545 LCE2BO14633 110 aa6.48□□□□□ -1.37
TARDBP-217ENST00000616545 TPRXLQ17RH7 258 aa6.48□□□□□ -1.37
TARDBP-217ENST00000616545 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
TARDBP-217ENST00000616545 LINC00313P59037 77 aa6.46□□□□□ -1.38
TARDBP-217ENST00000616545 PCLOQ9Y6V0 5065 aa6.46□□□□□ -1.38
TARDBP-217ENST00000616545 K7EQZ3 153 aa6.45□□□□□ -1.38
TARDBP-217ENST00000616545 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
TARDBP-217ENST00000616545 IMUPQ9GZP8 106 aa6.45□□□□□ -1.38
TARDBP-217ENST00000616545 C8orf17Q9NRJ1 99 aa6.43□□□□□ -1.38
TARDBP-217ENST00000616545 HIST1H4AP62805 103 aaKnown RBP6.41□□□□□ -1.38
TARDBP-217ENST00000616545 Q8N9L7 120 aa6.41□□□□□ -1.38
TARDBP-217ENST00000616545 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
TARDBP-217ENST00000616545 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
TARDBP-217ENST00000616545 HCG22E2RYF7 251 aa6.39□□□□□ -1.39
TARDBP-217ENST00000616545 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
TARDBP-217ENST00000616545 C9orf92A6NGG3 77 aa6.38□□□□□ -1.39
TARDBP-217ENST00000616545 CASC2Q6XLA1 102 aa6.38□□□□□ -1.39
TARDBP-217ENST00000616545 MT-ATP8P03928 68 aa6.37□□□□□ -1.39
TARDBP-217ENST00000616545 NOTCH2NLQ7Z3S9 236 aa6.37□□□□□ -1.39
TARDBP-217ENST00000616545 KRTAP16-1A8MUX0 517 aa6.36□□□□□ -1.39
TARDBP-217ENST00000616545 XP32Q5T750 250 aa6.36□□□□□ -1.39
TARDBP-217ENST00000616545 C20orf166-AS1Q96NR2 134 aa6.36□□□□□ -1.39
TARDBP-217ENST00000616545 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
TARDBP-217ENST00000616545 Q75L30 129 aa6.35□□□□□ -1.39
TARDBP-217ENST00000616545 Q8N9P0 234 aaPredicted RBP6.35□□□□□ -1.39
TARDBP-217ENST00000616545 A8MUU9 505 aa6.34□□□□□ -1.39
TARDBP-217ENST00000616545 WFDC13Q8IUB5 93 aa6.33□□□□□ -1.4
TARDBP-217ENST00000616545 A0A087WVE0 104 aa6.31□□□□□ -1.4
TARDBP-217ENST00000616545 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
TARDBP-217ENST00000616545 TP53AIP1Q9HCN2 124 aa6.3□□□□□ -1.4
TARDBP-217ENST00000616545 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
TARDBP-217ENST00000616545 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
TARDBP-217ENST00000616545 NDUFS5O43920 106 aa6.27□□□□□ -1.41
TARDBP-217ENST00000616545 SCGB1A1P11684 91 aa6.26□□□□□ -1.41
TARDBP-217ENST00000616545 SMIM20Q8N5G0 67 aa6.25□□□□□ -1.41
TARDBP-217ENST00000616545 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
TARDBP-217ENST00000616545 ZCCHC13Q8WW36 166 aaKnown RBP6.24□□□□□ -1.41
TARDBP-217ENST00000616545 FAM236AA0A1B0GUQ0 79 aa6.23□□□□□ -1.41
TARDBP-217ENST00000616545 FAM236BA0A1B0GV22 79 aa6.23□□□□□ -1.41
TARDBP-217ENST00000616545 UQCRQO14949 82 aa6.23□□□□□ -1.41
TARDBP-217ENST00000616545 ATOX1O00244 68 aa6.22□□□□□ -1.41
TARDBP-217ENST00000616545 HERC1Q15751 4861 aa6.2□□□□□ -1.42
TARDBP-217ENST00000616545 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
TARDBP-217ENST00000616545 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
TARDBP-217ENST00000616545 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
TARDBP-217ENST00000616545 TRAV22A0A0B4J277 110 aa6.17□□□□□ -1.42
TARDBP-217ENST00000616545 C5orf47Q569G3 176 aa6.17□□□□□ -1.42
TARDBP-217ENST00000616545 Q5W150 140 aa6.15□□□□□ -1.42
TARDBP-217ENST00000616545 H3BPC8 53 aa6.14□□□□□ -1.43
TARDBP-217ENST00000616545 MP68P56378 58 aa6.14□□□□□ -1.43
TARDBP-217ENST00000616545 HMCN2Q8NDA2 5059 aa6.14□□□□□ -1.43
TARDBP-217ENST00000616545 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
TARDBP-217ENST00000616545 LOC101927531A0A1B0GV80 90 aa6.11□□□□□ -1.43
TARDBP-217ENST00000616545 H0Y9P7 68 aa6.11□□□□□ -1.43
TARDBP-217ENST00000616545 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
TARDBP-217ENST00000616545 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
TARDBP-217ENST00000616545 SPINK7P58062 85 aa6.09□□□□□ -1.43
TARDBP-217ENST00000616545 LPAP08519 4548 aa6.09□□□□□ -1.43
TARDBP-217ENST00000616545 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
TARDBP-217ENST00000616545 LRP2P98164 4655 aa6.07□□□□□ -1.44
TARDBP-217ENST00000616545 C1orf64Q8NEQ6 169 aa6.06□□□□□ -1.44
TARDBP-217ENST00000616545 IGKV2D-30A0A075B6S6 120 aa6.05□□□□□ -1.44
TARDBP-217ENST00000616545 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
TARDBP-217ENST00000616545 LINC00208Q96KT6 92 aa6.05□□□□□ -1.44
TARDBP-217ENST00000616545 ANAPC13Q9BS18 74 aa6.05□□□□□ -1.44
TARDBP-217ENST00000616545 COX7CP15954 63 aa6.04□□□□□ -1.44
TARDBP-217ENST00000616545 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
TARDBP-217ENST00000616545 H3BS24 57 aa6.03□□□□□ -1.44
TARDBP-217ENST00000616545 A0A0U1RQV1 116 aa6.01□□□□□ -1.45
TARDBP-217ENST00000616545 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
TARDBP-217ENST00000616545 HRES1P13985 223 aa5.99□□□□□ -1.45
TARDBP-217ENST00000616545 RBM12B-AS1Q9P1G2 102 aa5.99□□□□□ -1.45
TARDBP-217ENST00000616545 KLKP1Q107X0 134 aa5.98□□□□□ -1.45
TARDBP-217ENST00000616545 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
TARDBP-217ENST00000616545 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
TARDBP-217ENST00000616545 MUC17Q685J3 4493 aa5.95□□□□□ -1.46
TARDBP-217ENST00000616545 NDUFC1O43677 76 aa5.95□□□□□ -1.46
TARDBP-217ENST00000616545 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
TARDBP-217ENST00000616545 COX6B2Q6YFQ2 88 aa5.92□□□□□ -1.46
TARDBP-217ENST00000616545 C4orf26Q17RF5 130 aa5.9□□□□□ -1.46
TARDBP-217ENST00000616545 FAM236DA0A1B0GTK5 79 aa5.89□□□□□ -1.47
TARDBP-217ENST00000616545 A8MUN3 132 aa5.89□□□□□ -1.47
TARDBP-217ENST00000616545 FAM236CP0DP71 79 aa5.89□□□□□ -1.47
TARDBP-217ENST00000616545 SPANXA2-OT1Q8N9U9 137 aa5.89□□□□□ -1.47
TARDBP-217ENST00000616545 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
TARDBP-217ENST00000616545 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
TARDBP-217ENST00000616545 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
TARDBP-217ENST00000616545 H1FX-AS1Q4G0G2 97 aa5.85□□□□□ -1.47
TARDBP-217ENST00000616545 H7BZZ5 65 aa5.83□□□□□ -1.48
TARDBP-217ENST00000616545 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
TARDBP-217ENST00000616545 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
TARDBP-217ENST00000616545 PCP4P48539 62 aa5.8□□□□□ -1.48
TARDBP-217ENST00000616545 ACYP2P14621 99 aa5.79□□□□□ -1.48
TARDBP-217ENST00000616545 CYSTM1Q9H1C7 97 aa5.78□□□□□ -1.48
TARDBP-217ENST00000616545 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms