RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 KRTAP11-1Q8IUC1 163 aa8.01□□□□□ -1.13
CHD1-212ENST00000614616 SPEGQ15772 3267 aa7.98□□□□□ -1.13
CHD1-212ENST00000614616 ADGRG4Q8IZF6 3080 aa7.97□□□□□ -1.13
CHD1-212ENST00000614616 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
CHD1-212ENST00000614616 ZNF292O60281 2723 aa7.96□□□□□ -1.14
CHD1-212ENST00000614616 LAMA5O15230 3695 aa7.94□□□□□ -1.14
CHD1-212ENST00000614616 NOTCH2NLQ7Z3S9 236 aa7.94□□□□□ -1.14
CHD1-212ENST00000614616 ASPMQ8IZT6 3477 aa7.93□□□□□ -1.14
CHD1-212ENST00000614616 CFAP47Q6ZTR5 3102 aa7.92□□□□□ -1.14
CHD1-212ENST00000614616 ATMQ13315 3056 aa7.91□□□□□ -1.14
CHD1-212ENST00000614616 DMDP11532 3685 aa7.91□□□□□ -1.14
CHD1-212ENST00000614616 DMXL2Q8TDJ6 3036 aa7.89□□□□□ -1.15
CHD1-212ENST00000614616 CSMD1Q96PZ7 3565 aa7.86□□□□□ -1.15
CHD1-212ENST00000614616 KRTAP1-1Q07627 177 aa7.85□□□□□ -1.15
CHD1-212ENST00000614616 FLNBO75369 2602 aaKnown RBP7.84□□□□□ -1.15
CHD1-212ENST00000614616 ZFHX4Q86UP3 3567 aa7.84□□□□□ -1.15
CHD1-212ENST00000614616 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
CHD1-212ENST00000614616 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.16
CHD1-212ENST00000614616 M0R2T5 61 aa7.74□□□□□ -1.17
CHD1-212ENST00000614616 LOC400499M0QZD8 3231 aa7.74□□□□□ -1.17
CHD1-212ENST00000614616 H0YAA0 97 aa7.74□□□□□ -1.17
CHD1-212ENST00000614616 CRYBG3Q68DQ2 2970 aa7.74□□□□□ -1.17
CHD1-212ENST00000614616 C10orf95Q9H7T3 257 aa7.73□□□□□ -1.17
CHD1-212ENST00000614616 PP632Q6XCG6 107 aa7.72□□□□□ -1.17
CHD1-212ENST00000614616 RELNP78509 3460 aa7.72□□□□□ -1.17
CHD1-212ENST00000614616 IGSF10Q6WRI0 2623 aa7.72□□□□□ -1.17
CHD1-212ENST00000614616 SPENQ96T58 3664 aaKnown RBP7.69□□□□□ -1.18
CHD1-212ENST00000614616 CELSR2Q9HCU4 2923 aa7.68□□□□□ -1.18
CHD1-212ENST00000614616 HIVEP1P15822 2718 aa7.66□□□□□ -1.18
CHD1-212ENST00000614616 KRTAP7-1Q8IUC3 87 aa7.66□□□□□ -1.18
CHD1-212ENST00000614616 P0C880 135 aa7.65□□□□□ -1.18
CHD1-212ENST00000614616 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.18
CHD1-212ENST00000614616 TGP01266 2768 aa7.64□□□□□ -1.19
CHD1-212ENST00000614616 SMG1Q96Q15 3661 aaKnown RBP7.63□□□□□ -1.19
CHD1-212ENST00000614616 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
CHD1-212ENST00000614616 HRNRQ86YZ3 2850 aaPredicted RBP7.6□□□□□ -1.19
CHD1-212ENST00000614616 TNP1P09430 55 aa7.6□□□□□ -1.19
CHD1-212ENST00000614616 FBN2P35556 2912 aa7.59□□□□□ -1.19
CHD1-212ENST00000614616 NF1P21359 2839 aa7.56□□□□□ -1.2
CHD1-212ENST00000614616 EYSQ5T1H1 3165 aa7.55□□□□□ -1.2
CHD1-212ENST00000614616 CELSR1Q9NYQ6 3014 aa7.55□□□□□ -1.2
CHD1-212ENST00000614616 KRTAP10-1P60331 282 aa7.55□□□□□ -1.2
CHD1-212ENST00000614616 PDZD2O15018 2839 aa7.53□□□□□ -1.2
CHD1-212ENST00000614616 DCHS2Q6V1P9 2916 aa7.53□□□□□ -1.2
CHD1-212ENST00000614616 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
CHD1-212ENST00000614616 Q6ZRN7 208 aaPredicted RBP7.48□□□□□ -1.21
CHD1-212ENST00000614616 ZANQ9Y493 2812 aa7.47□□□□□ -1.21
CHD1-212ENST00000614616 NBPF19A0A087WUL8 3843 aa7.46□□□□□ -1.22
CHD1-212ENST00000614616 NIPBLQ6KC79 2804 aaeCLIP7.46□□□□□ -1.222e-6■■□□□ 12.6
CHD1-212ENST00000614616 MXRA5Q9NR99 2828 aa7.46□□□□□ -1.22
CHD1-212ENST00000614616 KRTAP13-2Q52LG2 175 aa7.45□□□□□ -1.22
CHD1-212ENST00000614616 Q5VSD8 79 aa7.43□□□□□ -1.22
CHD1-212ENST00000614616 FLNCQ14315 2725 aa7.42□□□□□ -1.22
CHD1-212ENST00000614616 AKAP9Q99996 3911 aa7.39□□□□□ -1.23
CHD1-212ENST00000614616 SVEP1Q4LDE5 3571 aa7.35□□□□□ -1.23
CHD1-212ENST00000614616 VPS13CQ709C8 3753 aa7.34□□□□□ -1.23
CHD1-212ENST00000614616 KRTAP10-8P60410 259 aa7.32□□□□□ -1.24
CHD1-212ENST00000614616 TENM1Q9UKZ4 2725 aa7.28□□□□□ -1.24
CHD1-212ENST00000614616 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
CHD1-212ENST00000614616 KRTAP13-3Q3SY46 172 aa7.2□□□□□ -1.26
CHD1-212ENST00000614616 CUBNO60494 3623 aa7.18□□□□□ -1.26
CHD1-212ENST00000614616 MUC3AQ02505 3323 aa7.17□□□□□ -1.26
CHD1-212ENST00000614616 ALMS1Q8TCU4 4167 aa7.13□□□□□ -1.27
CHD1-212ENST00000614616 TENM2Q9NT68 2774 aa7.12□□□□□ -1.27
CHD1-212ENST00000614616 BSNQ9UPA5 3926 aa7.12□□□□□ -1.27
CHD1-212ENST00000614616 TENM4Q6N022 2769 aa7.11□□□□□ -1.27
CHD1-212ENST00000614616 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
CHD1-212ENST00000614616 CSMD2Q7Z408 3487 aa7.09□□□□□ -1.27
CHD1-212ENST00000614616 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
CHD1-212ENST00000614616 KRTAP15-1Q3LI76 137 aa7.03□□□□□ -1.28
CHD1-212ENST00000614616 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
CHD1-212ENST00000614616 KRTAP1-4P0C5Y4 121 aa7.01□□□□□ -1.29
CHD1-212ENST00000614616 PKD1L1Q8TDX9 2849 aa7.01□□□□□ -1.29
CHD1-212ENST00000614616 XP32Q5T750 250 aa7□□□□□ -1.29
CHD1-212ENST00000614616 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
CHD1-212ENST00000614616 INE1O15225 51 aa6.98□□□□□ -1.29
CHD1-212ENST00000614616 KRTAP12-1P59990 96 aa6.94□□□□□ -1.3
CHD1-212ENST00000614616 FBN1P35555 2871 aaKnown RBP6.93□□□□□ -1.3
CHD1-212ENST00000614616 MEGF8Q7Z7M0 2845 aa6.88□□□□□ -1.31
CHD1-212ENST00000614616 TRRAPQ9Y4A5 3859 aa6.86□□□□□ -1.31
CHD1-212ENST00000614616 VWFP04275 2813 aa6.84□□□□□ -1.31
CHD1-212ENST00000614616 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
CHD1-212ENST00000614616 PRO2289Q9P1D8 64 aa6.82□□□□□ -1.32
CHD1-212ENST00000614616 OTOGQ6ZRI0 2925 aa6.69□□□□□ -1.34
CHD1-212ENST00000614616 FBN3Q75N90 2809 aa6.68□□□□□ -1.34
CHD1-212ENST00000614616 A0A1B0GVY2 172 aa6.67□□□□□ -1.34
CHD1-212ENST00000614616 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.34
CHD1-212ENST00000614616 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
CHD1-212ENST00000614616 CMYA5Q8N3K9 4069 aa6.59□□□□□ -1.35
CHD1-212ENST00000614616 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
CHD1-212ENST00000614616 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
CHD1-212ENST00000614616 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
CHD1-212ENST00000614616 LYSTQ99698 3801 aa6.41□□□□□ -1.38
CHD1-212ENST00000614616 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
CHD1-212ENST00000614616 DNAH3Q8TD57 4116 aa6.33□□□□□ -1.4
CHD1-212ENST00000614616 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
CHD1-212ENST00000614616 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
CHD1-212ENST00000614616 HECTD4Q9Y4D8 3996 aa6.22□□□□□ -1.41
CHD1-212ENST00000614616 DNAH7Q8WXX0 4024 aa6.15□□□□□ -1.42
CHD1-212ENST00000614616 DNAH2Q9P225 4427 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms