RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 HYDINQ4G0P3 5121 aa10.02□□□□□ -0.81
CNOT3-208ENST00000613073 MOBPQ13875 183 aa10.02□□□□□ -0.81
CNOT3-208ENST00000613073 H3BPC8 53 aa10.01□□□□□ -0.81
CNOT3-208ENST00000613073 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
CNOT3-208ENST00000613073 SPINK7P58062 85 aa10□□□□□ -0.81
CNOT3-208ENST00000613073 A8MWP4 228 aa9.99□□□□□ -0.81
CNOT3-208ENST00000613073 IGLV8-61A0A075B6I0 122 aa9.98□□□□□ -0.81
CNOT3-208ENST00000613073 IGLV7-46A0A075B6I9 117 aa9.98□□□□□ -0.81
CNOT3-208ENST00000613073 WWC2-AS2Q96NR7 200 aa9.98□□□□□ -0.81
CNOT3-208ENST00000613073 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
CNOT3-208ENST00000613073 SPRR1BP22528 89 aa9.97□□□□□ -0.81
CNOT3-208ENST00000613073 C7orf65Q6ZTY9 151 aa9.97□□□□□ -0.81
CNOT3-208ENST00000613073 DNAH5Q8TE73 4624 aa9.97□□□□□ -0.81
CNOT3-208ENST00000613073 DNAH11Q96DT5 4516 aa9.95□□□□□ -0.82
CNOT3-208ENST00000613073 PLAC8Q9NZF1 115 aa9.95□□□□□ -0.82
CNOT3-208ENST00000613073 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
CNOT3-208ENST00000613073 C8orf87E5RJ46 101 aa9.94□□□□□ -0.82
CNOT3-208ENST00000613073 IGLV9-49A0A0B4J1Y8 123 aa9.93□□□□□ -0.82
CNOT3-208ENST00000613073 MMP24-AS1A0A0U1RRL7 71 aa9.93□□□□□ -0.82
CNOT3-208ENST00000613073 H3BS24 57 aa9.93□□□□□ -0.82
CNOT3-208ENST00000613073 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
CNOT3-208ENST00000613073 LINC01558Q9Y6Z2 57 aa9.92□□□□□ -0.82
CNOT3-208ENST00000613073 KRTAP21-3Q3LHN1 58 aa9.91□□□□□ -0.82
CNOT3-208ENST00000613073 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
CNOT3-208ENST00000613073 PRAC1Q96KF2 57 aa9.9□□□□□ -0.82
CNOT3-208ENST00000613073 ALMS1Q8TCU4 4167 aa9.89□□□□□ -0.83
CNOT3-208ENST00000613073 FAT2Q9NYQ8 4349 aa9.88□□□□□ -0.83
CNOT3-208ENST00000613073 HRES1P13985 223 aa9.87□□□□□ -0.83
CNOT3-208ENST00000613073 PKD1P98161 4303 aa9.87□□□□□ -0.83
CNOT3-208ENST00000613073 ZNF861PO60384 105 aa9.86□□□□□ -0.83
CNOT3-208ENST00000613073 PRR26Q8N8Z3 221 aa9.84□□□□□ -0.83
CNOT3-208ENST00000613073 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
CNOT3-208ENST00000613073 ADM2Q7Z4H4 148 aa9.83□□□□□ -0.84
CNOT3-208ENST00000613073 LINC00313P59037 77 aa9.82□□□□□ -0.84
CNOT3-208ENST00000613073 LINC00483Q53H64 154 aa9.82□□□□□ -0.84
CNOT3-208ENST00000613073 ZNF706Q9Y5V0 76 aaPredicted RBP9.81□□□□□ -0.84
CNOT3-208ENST00000613073 IGHV6-1A0A0B4J1U7 121 aa9.8□□□□□ -0.84
CNOT3-208ENST00000613073 IGLV7-43P04211 117 aa9.8□□□□□ -0.84
CNOT3-208ENST00000613073 LRP1BQ9NZR2 4599 aa9.79□□□□□ -0.84
CNOT3-208ENST00000613073 KRTAP10-1P60331 282 aa9.78□□□□□ -0.84
CNOT3-208ENST00000613073 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
CNOT3-208ENST00000613073 SACSQ9NZJ4 4579 aa9.75□□□□□ -0.85
CNOT3-208ENST00000613073 TP53AIP1Q9HCN2 124 aa9.75□□□□□ -0.85
CNOT3-208ENST00000613073 PKHD1P08F94 4074 aa9.74□□□□□ -0.85
CNOT3-208ENST00000613073 Q96NJ1 140 aa9.72□□□□□ -0.85
CNOT3-208ENST00000613073 A0A087X002 238 aa9.71□□□□□ -0.86
CNOT3-208ENST00000613073 NOTCH2NLQ7Z3S9 236 aa9.71□□□□□ -0.86
CNOT3-208ENST00000613073 Q6ZSA8 131 aa9.7□□□□□ -0.86
CNOT3-208ENST00000613073 VPS13BQ7Z7G8 4022 aa9.69□□□□□ -0.86
CNOT3-208ENST00000613073 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
CNOT3-208ENST00000613073 CDK2AP2O75956 126 aa9.65□□□□□ -0.86
CNOT3-208ENST00000613073 MRPL34Q9BQ48 92 aaKnown RBP9.65□□□□□ -0.86
CNOT3-208ENST00000613073 A0A1B0GVX0 72 aa9.64□□□□□ -0.87
CNOT3-208ENST00000613073 Q5W150 140 aa9.62□□□□□ -0.87
CNOT3-208ENST00000613073 SPINK6Q6UWN8 80 aa9.61□□□□□ -0.87
CNOT3-208ENST00000613073 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
CNOT3-208ENST00000613073 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
CNOT3-208ENST00000613073 A0A1B0GU69 56 aa9.55□□□□□ -0.88
CNOT3-208ENST00000613073 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
CNOT3-208ENST00000613073 KRTAP13-2Q52LG2 175 aa9.54□□□□□ -0.88
CNOT3-208ENST00000613073 ACYP2P14621 99 aa9.54□□□□□ -0.88
CNOT3-208ENST00000613073 SSBP3-AS1Q7Z2R9 100 aa9.54□□□□□ -0.88
CNOT3-208ENST00000613073 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
CNOT3-208ENST00000613073 KMT2CQ8NEZ4 4911 aaKnown RBP9.52□□□□□ -0.89
CNOT3-208ENST00000613073 KRTAP1-4P0C5Y4 121 aa9.49□□□□□ -0.89
CNOT3-208ENST00000613073 RYR2Q92736 4967 aa9.48□□□□□ -0.89
CNOT3-208ENST00000613073 SMR3BP02814 79 aaPredicted RBP9.47□□□□□ -0.89
CNOT3-208ENST00000613073 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
CNOT3-208ENST00000613073 CSAG1Q6PB30 78 aa9.46□□□□□ -0.9
CNOT3-208ENST00000613073 FAT1Q14517 4588 aa9.45□□□□□ -0.9
CNOT3-208ENST00000613073 KRTAP13-3Q3SY46 172 aa9.44□□□□□ -0.9
CNOT3-208ENST00000613073 SPATA8Q6RVD6 105 aa9.44□□□□□ -0.9
CNOT3-208ENST00000613073 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
CNOT3-208ENST00000613073 APOBP04114 4563 aaKnown RBP9.4□□□□□ -0.9
CNOT3-208ENST00000613073 A0A1B0GVY2 172 aa9.4□□□□□ -0.91
CNOT3-208ENST00000613073 UQCR11O14957 56 aa9.39□□□□□ -0.91
CNOT3-208ENST00000613073 TYMSOSQ8TAI1 123 aa9.38□□□□□ -0.91
CNOT3-208ENST00000613073 SPINK1P00995 79 aa9.27□□□□□ -0.93
CNOT3-208ENST00000613073 IGKV2D-30A0A075B6S6 120 aa9.27□□□□□ -0.93
CNOT3-208ENST00000613073 IGKV2-30P06310 120 aa9.27□□□□□ -0.93
CNOT3-208ENST00000613073 RYR3Q15413 4870 aa9.24□□□□□ -0.93
CNOT3-208ENST00000613073 FAM229AH3BQW9 127 aa9.24□□□□□ -0.93
CNOT3-208ENST00000613073 LINC00304Q8N9R0 145 aa9.24□□□□□ -0.93
CNOT3-208ENST00000613073 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
CNOT3-208ENST00000613073 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
CNOT3-208ENST00000613073 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
CNOT3-208ENST00000613073 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
CNOT3-208ENST00000613073 Q8N1X5 172 aa9.11□□□□□ -0.95
CNOT3-208ENST00000613073 HSPG2P98160 4391 aa9.1□□□□□ -0.95
CNOT3-208ENST00000613073 LRP1Q07954 4544 aaKnown RBP9.1□□□□□ -0.95
CNOT3-208ENST00000613073 RPS29P62273 56 aaKnown RBP9.08□□□□□ -0.96
CNOT3-208ENST00000613073 CRIPTQ9P021 101 aa9.07□□□□□ -0.96
CNOT3-208ENST00000613073 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
CNOT3-208ENST00000613073 H0YAA0 97 aa9.02□□□□□ -0.96
CNOT3-208ENST00000613073 KRTAP25-1Q3LHN0 102 aa9.02□□□□□ -0.97
CNOT3-208ENST00000613073 RYR1P21817 5038 aa9.01□□□□□ -0.97
CNOT3-208ENST00000613073 Q5VSD8 79 aa9.01□□□□□ -0.97
CNOT3-208ENST00000613073 A8MUU9 505 aa9□□□□□ -0.97
CNOT3-208ENST00000613073 ROMO1P60602 79 aa9□□□□□ -0.97
CNOT3-208ENST00000613073 TNXBP22105 4242 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms