RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 SVEP1Q4LDE5 3571 aa5.81□□□□□ -1.48
SRGAP2B-204ENST00000612199 CUBNO60494 3623 aa5.81□□□□□ -1.48
SRGAP2B-204ENST00000612199 C10orf95Q9H7T3 257 aa5.81□□□□□ -1.48
SRGAP2B-204ENST00000612199 DCHS2Q6V1P9 2916 aa5.81□□□□□ -1.48
SRGAP2B-204ENST00000612199 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
SRGAP2B-204ENST00000612199 APCP25054 2843 aa5.8□□□□□ -1.48
SRGAP2B-204ENST00000612199 SPRR1BP22528 89 aa5.77□□□□□ -1.49
SRGAP2B-204ENST00000612199 ZCCHC13Q8WW36 166 aaKnown RBP5.77□□□□□ -1.49
SRGAP2B-204ENST00000612199 TENM4Q6N022 2769 aa5.77□□□□□ -1.49
SRGAP2B-204ENST00000612199 NF1P21359 2839 aa5.77□□□□□ -1.49
SRGAP2B-204ENST00000612199 FAM229BQ4G0N7 80 aa5.77□□□□□ -1.49
SRGAP2B-204ENST00000612199 DMBT1Q9UGM3 2413 aaPredicted RBP5.76□□□□□ -1.49
SRGAP2B-204ENST00000612199 NIPBLQ6KC79 2804 aaeCLIP5.76□□□□□ -1.49
SRGAP2B-204ENST00000612199 FBN2P35556 2912 aa5.75□□□□□ -1.49
SRGAP2B-204ENST00000612199 Q6ZR54 194 aa5.74□□□□□ -1.49
SRGAP2B-204ENST00000612199 MMP24-AS1A0A0U1RRL7 71 aa5.74□□□□□ -1.49
SRGAP2B-204ENST00000612199 KRTAP26-1Q6PEX3 210 aa5.72□□□□□ -1.49
SRGAP2B-204ENST00000612199 A0A1B0GVY2 172 aa5.72□□□□□ -1.49
SRGAP2B-204ENST00000612199 KRTAP10-8P60410 259 aa5.71□□□□□ -1.49
SRGAP2B-204ENST00000612199 LINC00472Q9H8W2 130 aa5.7□□□□□ -1.5
SRGAP2B-204ENST00000612199 SPENQ96T58 3664 aaKnown RBP5.7□□□□□ -1.5
SRGAP2B-204ENST00000612199 HRNRQ86YZ3 2850 aaPredicted RBP5.68□□□□□ -1.5
SRGAP2B-204ENST00000612199 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
SRGAP2B-204ENST00000612199 Q5W150 140 aa5.68□□□□□ -1.5
SRGAP2B-204ENST00000612199 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
SRGAP2B-204ENST00000612199 Q75L30 129 aa5.66□□□□□ -1.5
SRGAP2B-204ENST00000612199 KRTAP10-2P60368 255 aa5.65□□□□□ -1.5
SRGAP2B-204ENST00000612199 CYSTM1Q9H1C7 97 aa5.65□□□□□ -1.51
SRGAP2B-204ENST00000612199 PANO1I0J062 215 aa5.65□□□□□ -1.51
SRGAP2B-204ENST00000612199 LCE6AA0A183 80 aa5.64□□□□□ -1.51
SRGAP2B-204ENST00000612199 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
SRGAP2B-204ENST00000612199 A8MUU9 505 aa5.64□□□□□ -1.51
SRGAP2B-204ENST00000612199 KRTAP10-1P60331 282 aa5.63□□□□□ -1.51
SRGAP2B-204ENST00000612199 Q5XG85 94 aa5.62□□□□□ -1.51
SRGAP2B-204ENST00000612199 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
SRGAP2B-204ENST00000612199 NBPF19A0A087WUL8 3843 aa5.6□□□□□ -1.51
SRGAP2B-204ENST00000612199 CELSR1Q9NYQ6 3014 aa5.57□□□□□ -1.52
SRGAP2B-204ENST00000612199 TNP1P09430 55 aa5.57□□□□□ -1.52
SRGAP2B-204ENST00000612199 Q5VV11 94 aa5.54□□□□□ -1.52
SRGAP2B-204ENST00000612199 MXRA5Q9NR99 2828 aa5.54□□□□□ -1.52
SRGAP2B-204ENST00000612199 KRTAP29-1A8MX34 341 aaPredicted RBP5.53□□□□□ -1.52
SRGAP2B-204ENST00000612199 KRTAP11-1Q8IUC1 163 aa5.52□□□□□ -1.53
SRGAP2B-204ENST00000612199 TENM3Q9P273 2699 aa5.51□□□□□ -1.53
SRGAP2B-204ENST00000612199 KRTAP10-10P60014 251 aa5.5□□□□□ -1.53
SRGAP2B-204ENST00000612199 A0A087X002 238 aa5.5□□□□□ -1.53
SRGAP2B-204ENST00000612199 CSMD2Q7Z408 3487 aa5.49□□□□□ -1.53
SRGAP2B-204ENST00000612199 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
SRGAP2B-204ENST00000612199 TENM1Q9UKZ4 2725 aa5.47□□□□□ -1.53
SRGAP2B-204ENST00000612199 KRTAP7-1Q8IUC3 87 aa5.46□□□□□ -1.54
SRGAP2B-204ENST00000612199 Q6ZRN7 208 aaPredicted RBP5.44□□□□□ -1.54
SRGAP2B-204ENST00000612199 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
SRGAP2B-204ENST00000612199 A8MU10 97 aa5.44□□□□□ -1.54
SRGAP2B-204ENST00000612199 ZFHX3Q15911 3703 aa5.42□□□□□ -1.54
SRGAP2B-204ENST00000612199 ASB16-AS1Q495Z4 193 aa5.41□□□□□ -1.54
SRGAP2B-204ENST00000612199 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
SRGAP2B-204ENST00000612199 VWFP04275 2813 aa5.38□□□□□ -1.55
SRGAP2B-204ENST00000612199 FBN1P35555 2871 aaKnown RBP5.38□□□□□ -1.55
SRGAP2B-204ENST00000612199 BSNQ9UPA5 3926 aa5.37□□□□□ -1.55
SRGAP2B-204ENST00000612199 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
SRGAP2B-204ENST00000612199 VPS13CQ709C8 3753 aa5.36□□□□□ -1.55
SRGAP2B-204ENST00000612199 KRTAP13-1Q8IUC0 172 aa5.35□□□□□ -1.55
SRGAP2B-204ENST00000612199 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
SRGAP2B-204ENST00000612199 KRTAP13-2Q52LG2 175 aa5.31□□□□□ -1.56
SRGAP2B-204ENST00000612199 CRCT1Q9UGL9 99 aa5.31□□□□□ -1.56
SRGAP2B-204ENST00000612199 PDZD2O15018 2839 aa5.31□□□□□ -1.56
SRGAP2B-204ENST00000612199 KRTAP25-1Q3LHN0 102 aa5.28□□□□□ -1.56
SRGAP2B-204ENST00000612199 TGP01266 2768 aa5.27□□□□□ -1.57
SRGAP2B-204ENST00000612199 PP632Q6XCG6 107 aa5.24□□□□□ -1.57
SRGAP2B-204ENST00000612199 SRRM2Q9UQ35 2752 aaKnown RBP5.23□□□□□ -1.57
SRGAP2B-204ENST00000612199 OTOGQ6ZRI0 2925 aa5.22□□□□□ -1.57
SRGAP2B-204ENST00000612199 A6NN06 94 aa5.18□□□□□ -1.58
SRGAP2B-204ENST00000612199 KRTAP21-3Q3LHN1 58 aa5.16□□□□□ -1.58
SRGAP2B-204ENST00000612199 TRRAPQ9Y4A5 3859 aa5.1□□□□□ -1.59
SRGAP2B-204ENST00000612199 KRTAP1-4P0C5Y4 121 aa5.08□□□□□ -1.6
SRGAP2B-204ENST00000612199 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
SRGAP2B-204ENST00000612199 ZNF469Q96JG9 3925 aaPredicted RBP5.01□□□□□ -1.61
SRGAP2B-204ENST00000612199 FBN3Q75N90 2809 aa4.98□□□□□ -1.61
SRGAP2B-204ENST00000612199 XP32Q5T750 250 aa4.97□□□□□ -1.61
SRGAP2B-204ENST00000612199 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
SRGAP2B-204ENST00000612199 KRTAP10-6P60371 365 aaPredicted RBP4.94□□□□□ -1.62
SRGAP2B-204ENST00000612199 H0YAA0 97 aa4.92□□□□□ -1.62
SRGAP2B-204ENST00000612199 KRTAP12-2P59991 146 aa4.91□□□□□ -1.62
SRGAP2B-204ENST00000612199 ANK3Q12955 4377 aaKnown RBP4.88□□□□□ -1.63
SRGAP2B-204ENST00000612199 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
SRGAP2B-204ENST00000612199 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
SRGAP2B-204ENST00000612199 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
SRGAP2B-204ENST00000612199 AKAP9Q99996 3911 aa4.86□□□□□ -1.63
SRGAP2B-204ENST00000612199 KRTAP13-3Q3SY46 172 aa4.81□□□□□ -1.64
SRGAP2B-204ENST00000612199 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
SRGAP2B-204ENST00000612199 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
SRGAP2B-204ENST00000612199 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
SRGAP2B-204ENST00000612199 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
SRGAP2B-204ENST00000612199 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
SRGAP2B-204ENST00000612199 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
SRGAP2B-204ENST00000612199 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
SRGAP2B-204ENST00000612199 DNAH10Q8IVF4 4471 aa4.44□□□□□ -1.7
SRGAP2B-204ENST00000612199 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
SRGAP2B-204ENST00000612199 KRTAP4-5Q9BYR2 181 aa4.41□□□□□ -1.7
SRGAP2B-204ENST00000612199 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
SRGAP2B-204ENST00000612199 LYSTQ99698 3801 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms