RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 C3orf79P0CE67 100 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 UBE2D1P51668 147 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 DEFB121Q5J5C9 76 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 C20orf197Q8N268 126 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 C20orf78Q9BR46 151 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 RHPN1-AS1Q9BWJ2 59 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 PRKDCP78527 4128 aaKnown RBP1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 CUBNO60494 3623 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 TENM3Q9P273 2699 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 CMYA5Q8N3K9 4069 aa1.29□□□□□ -2.2
AC004542.1-201ENST00000602955 TRAV21A0A0B4J279 112 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 A0A1B0GUT8 65 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 ZNF815PA8K554 130 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 HIGD1CA8MV81 97 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 M0R3E3 92 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 CRIP1P50238 77 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 UBE2D3P61077 147 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 UBE2D2P62837 147 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 WFDC2Q14508 124 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 ZNF56Q15929 161 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 DEFB114Q30KQ6 69 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 SFTA2Q6UW10 78 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 LINC00208Q96KT6 92 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 DNAH9Q9NYC9 4486 aa1.28□□□□□ -2.2
AC004542.1-201ENST00000602955 TRBV25-1A0A075B6N4 114 aa1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 H3BNG1 76 aa1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 PRB3Q04118 309 aaPredicted RBP1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 Q6JHZ5 121 aa1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 LINC00575Q6W349 94 aa1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 TMEM263Q8WUH6 116 aaKnown RBP1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 HUWE1Q7Z6Z7 4374 aaKnown RBP1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 DNAH7Q8WXX0 4024 aa1.27□□□□□ -2.21
AC004542.1-201ENST00000602955 NBEAL2Q6ZNJ1 2754 aa1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 TRBV30A0A0K0K1B3 111 aa1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 H3BVH4 76 aa1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 APELAP0DMC3 54 aa1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 POLR2KP53803 58 aaKnown RBP1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 C10orf99Q6UWK7 81 aa1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 UBL5Q9BZL1 73 aa1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 PLECQ15149 4684 aaKnown RBP1.26□□□□□ -2.21
AC004542.1-201ENST00000602955 DNAH6Q9C0G6 4158 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 M0QY20 66 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 SPINK4O60575 86 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 ARMS2P0C7Q2 107 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 PRR15LQ9BU68 103 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 SMIM2Q9BVW6 85 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 DNAH1Q9P2D7 4330 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 VPS13DQ5THJ4 4388 aa1.25□□□□□ -2.21
AC004542.1-201ENST00000602955 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 A0A087WTM6 91 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 D6R8Y8 96 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 H7BZZ5 65 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 DEFB131AP59861 70 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 COX17Q14061 63 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 DEFB136Q30KP8 78 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 MUSTN1Q8IVN3 82 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 COX7B2Q8TF08 81 aa1.24□□□□□ -2.21
AC004542.1-201ENST00000602955 IGIPA6NJ69 53 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 H0YGX0 51 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 CHKB-CPT1BH3BT56 60 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 FCER1GP30273 86 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 Q5VV11 94 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 SMR3AQ99954 134 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 UBE2D4Q9Y2X8 147 aa1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 TIMM8BQ9Y5J9 83 aaPredicted RBP1.23□□□□□ -2.21
AC004542.1-201ENST00000602955 STARD9Q9P2P6 4700 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 COL7A1Q02388 2944 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 TRAV22A0A0B4J277 110 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 F8VRH5 84 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 MGPP08493 103 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 SPINK13Q1W4C9 94 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 Q6ZQY7 126 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 PRO0255Q9UI72 69 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 ALMS1Q8TCU4 4167 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 CSMD3Q7Z407 3707 aa1.22□□□□□ -2.21
AC004542.1-201ENST00000602955 TENM2Q9NT68 2774 aa1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 SACSQ9NZJ4 4579 aa1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 GVQW2A0A096LPI5 108 aaPredicted RBP1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 I3L3M4 83 aa1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 CDC42SE2Q9NRR3 84 aa1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 LINC00846Q9NV44 126 aa1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 DNAH11Q96DT5 4516 aa1.21□□□□□ -2.22
AC004542.1-201ENST00000602955 DNAH2Q9P225 4427 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 F8WEM9 126 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 K7EIL1 84 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 UQCR11O14957 56 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 SPART-AS1P0CW21 52 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 DEFB1P60022 68 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 LINC01556Q5JQF7 62 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 LELP1Q5T871 98 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 Q96NJ1 140 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 DNAH17Q9UFH2 4485 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 FAT2Q9NYQ8 4349 aa1.2□□□□□ -2.22
AC004542.1-201ENST00000602955 DNAH10Q8IVF4 4471 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 TRGV1A0A0A0MS02 117 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 TRBV7-4A0A0J9YYF1 115 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 NDUFA1O15239 70 aa1.19□□□□□ -2.22
AC004542.1-201ENST00000602955 TGP01266 2768 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms