RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 FAM236BA0A1B0GV22 79 aa13.18□□□□□ -0.3
SYMPK-212ENST00000598896 NDUFB1O75438 58 aa13.16□□□□□ -0.3
SYMPK-212ENST00000598896 A0A1B0GVX0 72 aa13.14□□□□□ -0.31
SYMPK-212ENST00000598896 DMBT1Q9UGM3 2413 aaPredicted RBP13.14□□□□□ -0.31
SYMPK-212ENST00000598896 KRTAP29-1A8MX34 341 aaPredicted RBP13.14□□□□□ -0.31
SYMPK-212ENST00000598896 RETNLBQ9BQ08 111 aa13.14□□□□□ -0.31
SYMPK-212ENST00000598896 IGHV6-1A0A0B4J1U7 121 aa13.13□□□□□ -0.31
SYMPK-212ENST00000598896 SCGB1A1P11684 91 aa13.12□□□□□ -0.31
SYMPK-212ENST00000598896 NOTCH2NLQ7Z3S9 236 aa13.1□□□□□ -0.31
SYMPK-212ENST00000598896 MMP24-AS1A0A0U1RRL7 71 aa13.08□□□□□ -0.32
SYMPK-212ENST00000598896 HCG22E2RYF7 251 aa13.08□□□□□ -0.32
SYMPK-212ENST00000598896 WFDC13Q8IUB5 93 aa13.06□□□□□ -0.32
SYMPK-212ENST00000598896 C8orf17Q9NRJ1 99 aa13.06□□□□□ -0.32
SYMPK-212ENST00000598896 CASC2Q6XLA1 102 aa13.01□□□□□ -0.33
SYMPK-212ENST00000598896 PCLOQ9Y6V0 5065 aa13□□□□□ -0.33
SYMPK-212ENST00000598896 hDV103S1A0JD37 113 aa12.98□□□□□ -0.33
SYMPK-212ENST00000598896 C8orf87E5RJ46 101 aa12.96□□□□□ -0.33
SYMPK-212ENST00000598896 ATOX1O00244 68 aa12.95□□□□□ -0.34
SYMPK-212ENST00000598896 LINC00313P59037 77 aa12.95□□□□□ -0.34
SYMPK-212ENST00000598896 J3QL48 77 aa12.93□□□□□ -0.34
SYMPK-212ENST00000598896 KRTAP16-1A8MUX0 517 aa12.89□□□□□ -0.35
SYMPK-212ENST00000598896 TMEM254Q8TBM7 123 aa12.89□□□□□ -0.35
SYMPK-212ENST00000598896 FP248Q71RG6 208 aaPredicted RBP12.89□□□□□ -0.35
SYMPK-212ENST00000598896 MRPL34Q9BQ48 92 aaKnown RBP12.89□□□□□ -0.35
SYMPK-212ENST00000598896 ANAPC13Q9BS18 74 aa12.89□□□□□ -0.35
SYMPK-212ENST00000598896 OCR1Q9BZK8 76 aa12.87□□□□□ -0.35
SYMPK-212ENST00000598896 C9orf92A6NGG3 77 aa12.86□□□□□ -0.35
SYMPK-212ENST00000598896 IGLV7-46A0A075B6I9 117 aa12.82□□□□□ -0.36
SYMPK-212ENST00000598896 PCP4P48539 62 aa12.8□□□□□ -0.36
SYMPK-212ENST00000598896 SERP2Q8N6R1 65 aa12.8□□□□□ -0.36
SYMPK-212ENST00000598896 TRAV7A0A075B6U4 112 aa12.79□□□□□ -0.36
SYMPK-212ENST00000598896 PRR4Q16378 134 aa12.79□□□□□ -0.36
SYMPK-212ENST00000598896 SMIM20Q8N5G0 67 aa12.79□□□□□ -0.36
SYMPK-212ENST00000598896 NDUFS5O43920 106 aa12.78□□□□□ -0.36
SYMPK-212ENST00000598896 Q8N9P0 234 aaPredicted RBP12.78□□□□□ -0.36
SYMPK-212ENST00000598896 KRTAP13-3Q3SY46 172 aa12.74□□□□□ -0.37
SYMPK-212ENST00000598896 COX7CP15954 63 aa12.72□□□□□ -0.37
SYMPK-212ENST00000598896 TP53AIP1Q9HCN2 124 aa12.69□□□□□ -0.38
SYMPK-212ENST00000598896 UQCRQO14949 82 aa12.68□□□□□ -0.38
SYMPK-212ENST00000598896 C20orf166-AS1Q96NR2 134 aa12.66□□□□□ -0.38
SYMPK-212ENST00000598896 CCDC179H3BU77 68 aa12.65□□□□□ -0.38
SYMPK-212ENST00000598896 A8MUU9 505 aa12.63□□□□□ -0.39
SYMPK-212ENST00000598896 Q5W150 140 aa12.63□□□□□ -0.39
SYMPK-212ENST00000598896 TPRXLQ17RH7 258 aa12.62□□□□□ -0.39
SYMPK-212ENST00000598896 XP32Q5T750 250 aa12.61□□□□□ -0.39
SYMPK-212ENST00000598896 TRAV22A0A0B4J277 110 aa12.61□□□□□ -0.39
SYMPK-212ENST00000598896 C5orf47Q569G3 176 aa12.61□□□□□ -0.39
SYMPK-212ENST00000598896 LPAP08519 4548 aa12.6□□□□□ -0.39
SYMPK-212ENST00000598896 C20orf197Q8N268 126 aa12.59□□□□□ -0.39
SYMPK-212ENST00000598896 H0Y9P7 68 aa12.59□□□□□ -0.39
SYMPK-212ENST00000598896 HERC1Q15751 4861 aa12.58□□□□□ -0.4
SYMPK-212ENST00000598896 Q75L30 129 aa12.57□□□□□ -0.4
SYMPK-212ENST00000598896 SNURFQ9Y675 71 aa12.54□□□□□ -0.4
SYMPK-212ENST00000598896 A0A0U1RQV1 116 aa12.53□□□□□ -0.4
SYMPK-212ENST00000598896 MP68P56378 58 aa12.53□□□□□ -0.4
SYMPK-212ENST00000598896 CYSTM1Q9H1C7 97 aa12.53□□□□□ -0.4
SYMPK-212ENST00000598896 ZCCHC13Q8WW36 166 aaKnown RBP12.51□□□□□ -0.41
SYMPK-212ENST00000598896 LINC00208Q96KT6 92 aa12.51□□□□□ -0.41
SYMPK-212ENST00000598896 RPL37P61927 97 aaKnown RBP12.49□□□□□ -0.41
SYMPK-212ENST00000598896 KLKP1Q107X0 134 aa12.49□□□□□ -0.41
SYMPK-212ENST00000598896 LRP2P98164 4655 aa12.46□□□□□ -0.41
SYMPK-212ENST00000598896 C1orf64Q8NEQ6 169 aa12.46□□□□□ -0.42
SYMPK-212ENST00000598896 H3BPC8 53 aa12.44□□□□□ -0.42
SYMPK-212ENST00000598896 HMCN2Q8NDA2 5059 aa12.39□□□□□ -0.43
SYMPK-212ENST00000598896 ATP11AUNQ6ZP68 121 aa12.38□□□□□ -0.43
SYMPK-212ENST00000598896 LOC101927531A0A1B0GV80 90 aa12.36□□□□□ -0.43
SYMPK-212ENST00000598896 IGKV2-30P06310 120 aa12.35□□□□□ -0.43
SYMPK-212ENST00000598896 H7BZZ5 65 aa12.33□□□□□ -0.44
SYMPK-212ENST00000598896 CYP4F30PQ9H0H9 118 aa12.33□□□□□ -0.44
SYMPK-212ENST00000598896 IGKV2D-30A0A075B6S6 120 aa12.32□□□□□ -0.44
SYMPK-212ENST00000598896 PCOTHQ58A44 107 aa12.29□□□□□ -0.44
SYMPK-212ENST00000598896 NDUFC1O43677 76 aa12.27□□□□□ -0.45
SYMPK-212ENST00000598896 C7orf65Q6ZTY9 151 aa12.25□□□□□ -0.45
SYMPK-212ENST00000598896 SPINK7P58062 85 aa12.23□□□□□ -0.45
SYMPK-212ENST00000598896 SEC61BP60468 96 aaKnown RBP12.15□□□□□ -0.46
SYMPK-212ENST00000598896 HRES1P13985 223 aa12.13□□□□□ -0.47
SYMPK-212ENST00000598896 TMEM258P61165 79 aa12.13□□□□□ -0.47
SYMPK-212ENST00000598896 SPANXA2-OT1Q8N9U9 137 aa12.07□□□□□ -0.48
SYMPK-212ENST00000598896 MUC17Q685J3 4493 aa12.06□□□□□ -0.48
SYMPK-212ENST00000598896 FAM236DA0A1B0GTK5 79 aa12.05□□□□□ -0.48
SYMPK-212ENST00000598896 FAM236CP0DP71 79 aa12.05□□□□□ -0.48
SYMPK-212ENST00000598896 C4orf26Q17RF5 130 aa12.04□□□□□ -0.48
SYMPK-212ENST00000598896 KRTAP4-1Q9BYQ7 146 aa12.02□□□□□ -0.48
SYMPK-212ENST00000598896 ATP5EP56381 51 aaPredicted RBP11.95□□□□□ -0.5
SYMPK-212ENST00000598896 UBR4Q5T4S7 5183 aa11.93□□□□□ -0.5
SYMPK-212ENST00000598896 MUC2Q02817 5179 aa11.92□□□□□ -0.5
SYMPK-212ENST00000598896 DMAC1Q96GE9 116 aa11.91□□□□□ -0.5
SYMPK-212ENST00000598896 KRTAP3-1Q9BYR8 98 aa11.89□□□□□ -0.51
SYMPK-212ENST00000598896 MPLKIPQ8TAP9 179 aa11.88□□□□□ -0.51
SYMPK-212ENST00000598896 COX6B2Q6YFQ2 88 aa11.87□□□□□ -0.51
SYMPK-212ENST00000598896 A8MUN3 132 aa11.78□□□□□ -0.52
SYMPK-212ENST00000598896 ACYP2P14621 99 aa11.78□□□□□ -0.52
SYMPK-212ENST00000598896 RBM12B-AS1Q9P1G2 102 aa11.75□□□□□ -0.53
SYMPK-212ENST00000598896 RNF213Q63HN8 5207 aa11.75□□□□□ -0.53
SYMPK-212ENST00000598896 SERP1Q9Y6X1 66 aa11.74□□□□□ -0.53
SYMPK-212ENST00000598896 COA5Q86WW8 74 aa11.74□□□□□ -0.53
SYMPK-212ENST00000598896 KRTAP19-2Q3LHN2 52 aa11.67□□□□□ -0.54
SYMPK-212ENST00000598896 RPS28P62857 69 aaKnown RBP11.63□□□□□ -0.55
SYMPK-212ENST00000598896 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
SYMPK-212ENST00000598896 CHKB-CPT1BH3BT56 60 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms