RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 Q6ZSA8 131 aa13.33□□□□□ -0.28
SRRM1-222ENST00000596378 MPLKIPQ8TAP9 179 aa13.33□□□□□ -0.28
SRRM1-222ENST00000596378 H3BPC8 53 aa13.31□□□□□ -0.28
SRRM1-222ENST00000596378 NDUFS5O43920 106 aa13.3□□□□□ -0.28
SRRM1-222ENST00000596378 CYP4F30PQ9H0H9 118 aa13.29□□□□□ -0.28
SRRM1-222ENST00000596378 VPS13BQ7Z7G8 4022 aa13.27□□□□□ -0.28
SRRM1-222ENST00000596378 MRPL34Q9BQ48 92 aaKnown RBP13.25□□□□□ -0.29
SRRM1-222ENST00000596378 SSBP3-AS1Q7Z2R9 100 aa13.24□□□□□ -0.29
SRRM1-222ENST00000596378 KRTAP13-2Q52LG2 175 aa13.24□□□□□ -0.29
SRRM1-222ENST00000596378 TP53AIP1Q9HCN2 124 aa13.24□□□□□ -0.29
SRRM1-222ENST00000596378 CD164Q04900 197 aa13.22□□□□□ -0.29
SRRM1-222ENST00000596378 PKHD1P08F94 4074 aa13.21□□□□□ -0.29
SRRM1-222ENST00000596378 PCOTHQ58A44 107 aa13.19□□□□□ -0.3
SRRM1-222ENST00000596378 SACSQ9NZJ4 4579 aa13.19□□□□□ -0.3
SRRM1-222ENST00000596378 SPANXA2-OT1Q8N9U9 137 aa13.18□□□□□ -0.3
SRRM1-222ENST00000596378 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
SRRM1-222ENST00000596378 LINC00336Q6ZUF6 198 aa13.15□□□□□ -0.3
SRRM1-222ENST00000596378 KRTAP1-4P0C5Y4 121 aa13.13□□□□□ -0.31
SRRM1-222ENST00000596378 Q5W150 140 aa13.08□□□□□ -0.32
SRRM1-222ENST00000596378 IGLV7-46A0A075B6I9 117 aa13.06□□□□□ -0.32
SRRM1-222ENST00000596378 C1orf195Q5TG92 126 aa13.06□□□□□ -0.32
SRRM1-222ENST00000596378 Q1T7F1 81 aa13.04□□□□□ -0.32
SRRM1-222ENST00000596378 C8orf87E5RJ46 101 aa13□□□□□ -0.33
SRRM1-222ENST00000596378 PLA2G1BP04054 148 aaKnown RBP13□□□□□ -0.33
SRRM1-222ENST00000596378 KRTAP13-3Q3SY46 172 aa13□□□□□ -0.33
SRRM1-222ENST00000596378 LINC00313P59037 77 aa12.99□□□□□ -0.33
SRRM1-222ENST00000596378 DYNC1H1Q14204 4646 aaKnown RBP12.99□□□□□ -0.33
SRRM1-222ENST00000596378 PSPHP1O15172 72 aa12.97□□□□□ -0.33
SRRM1-222ENST00000596378 COA5Q86WW8 74 aa12.97□□□□□ -0.33
SRRM1-222ENST00000596378 Q8N9P0 234 aaPredicted RBP12.95□□□□□ -0.34
SRRM1-222ENST00000596378 BRK1Q8WUW1 75 aa12.95□□□□□ -0.34
SRRM1-222ENST00000596378 RETNLBQ9BQ08 111 aa12.94□□□□□ -0.34
SRRM1-222ENST00000596378 LOC101927531A0A1B0GV80 90 aa12.93□□□□□ -0.34
SRRM1-222ENST00000596378 TYMSOSQ8TAI1 123 aa12.93□□□□□ -0.34
SRRM1-222ENST00000596378 LIMD2Q9BT23 127 aa12.91□□□□□ -0.34
SRRM1-222ENST00000596378 SMR3BP02814 79 aaPredicted RBP12.9□□□□□ -0.34
SRRM1-222ENST00000596378 PRO0628Q9UI54 55 aa12.89□□□□□ -0.35
SRRM1-222ENST00000596378 A8MUN3 132 aa12.87□□□□□ -0.35
SRRM1-222ENST00000596378 C4orf48Q5BLP8 95 aa12.87□□□□□ -0.35
SRRM1-222ENST00000596378 KRTAP16-1A8MUX0 517 aa12.86□□□□□ -0.35
SRRM1-222ENST00000596378 FAT1Q14517 4588 aa12.85□□□□□ -0.35
SRRM1-222ENST00000596378 PRR26Q8N8Z3 221 aa12.85□□□□□ -0.35
SRRM1-222ENST00000596378 HRES1P13985 223 aa12.83□□□□□ -0.36
SRRM1-222ENST00000596378 APOBP04114 4563 aaKnown RBP12.83□□□□□ -0.36
SRRM1-222ENST00000596378 V9GYY9 64 aa12.81□□□□□ -0.36
SRRM1-222ENST00000596378 FAM229AH3BQW9 127 aa12.8□□□□□ -0.36
SRRM1-222ENST00000596378 RYR2Q92736 4967 aa12.8□□□□□ -0.36
SRRM1-222ENST00000596378 SPINK1P00995 79 aa12.79□□□□□ -0.36
SRRM1-222ENST00000596378 A0A1B0GVY2 172 aa12.79□□□□□ -0.36
SRRM1-222ENST00000596378 Q5VV11 94 aa12.76□□□□□ -0.37
SRRM1-222ENST00000596378 LINC00304Q8N9R0 145 aa12.74□□□□□ -0.37
SRRM1-222ENST00000596378 PRR15LQ9BU68 103 aa12.74□□□□□ -0.37
SRRM1-222ENST00000596378 KMT2CQ8NEZ4 4911 aaKnown RBP12.74□□□□□ -0.37
SRRM1-222ENST00000596378 SPAG11AQ6PDA7 123 aa12.71□□□□□ -0.37
SRRM1-222ENST00000596378 IGKV2-30P06310 120 aa12.71□□□□□ -0.38
SRRM1-222ENST00000596378 KRTAP10-4P60372 401 aaPredicted RBP12.67□□□□□ -0.38
SRRM1-222ENST00000596378 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
SRRM1-222ENST00000596378 IGKV2D-30A0A075B6S6 120 aa12.63□□□□□ -0.39
SRRM1-222ENST00000596378 CHKB-CPT1BH3BT56 60 aa12.63□□□□□ -0.39
SRRM1-222ENST00000596378 A8MU10 97 aa12.61□□□□□ -0.39
SRRM1-222ENST00000596378 DMAC1Q96GE9 116 aa12.6□□□□□ -0.39
SRRM1-222ENST00000596378 ACYP2P14621 99 aa12.6□□□□□ -0.39
SRRM1-222ENST00000596378 RPS29P62273 56 aaKnown RBP12.59□□□□□ -0.39
SRRM1-222ENST00000596378 LINC01558Q9Y6Z2 57 aa12.58□□□□□ -0.4
SRRM1-222ENST00000596378 Q75L30 129 aa12.55□□□□□ -0.4
SRRM1-222ENST00000596378 C9orf92A6NGG3 77 aa12.5□□□□□ -0.41
SRRM1-222ENST00000596378 A6NED7 52 aa12.46□□□□□ -0.41
SRRM1-222ENST00000596378 LCA10Q71F78 164 aa12.42□□□□□ -0.42
SRRM1-222ENST00000596378 C7orf65Q6ZTY9 151 aa12.41□□□□□ -0.42
SRRM1-222ENST00000596378 LRP1Q07954 4544 aaKnown RBP12.38□□□□□ -0.43
SRRM1-222ENST00000596378 SPINK7P58062 85 aa12.38□□□□□ -0.43
SRRM1-222ENST00000596378 RYR3Q15413 4870 aa12.37□□□□□ -0.43
SRRM1-222ENST00000596378 HSPG2P98160 4391 aa12.34□□□□□ -0.43
SRRM1-222ENST00000596378 Q8N1X5 172 aa12.34□□□□□ -0.43
SRRM1-222ENST00000596378 A8MUU9 505 aa12.32□□□□□ -0.44
SRRM1-222ENST00000596378 C20orf166-AS1Q96NR2 134 aa12.32□□□□□ -0.44
SRRM1-222ENST00000596378 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
SRRM1-222ENST00000596378 TNXBP22105 4242 aa12.31□□□□□ -0.44
SRRM1-222ENST00000596378 SPTSSBQ8NFR3 76 aa12.28□□□□□ -0.44
SRRM1-222ENST00000596378 CDC42SE1Q9NRR8 79 aa12.27□□□□□ -0.44
SRRM1-222ENST00000596378 FAT3Q8TDW7 4589 aa12.27□□□□□ -0.45
SRRM1-222ENST00000596378 Q5VSD8 79 aa12.22□□□□□ -0.45
SRRM1-222ENST00000596378 A0A1B0GU69 56 aa12.21□□□□□ -0.45
SRRM1-222ENST00000596378 RYR1P21817 5038 aa12.2□□□□□ -0.46
SRRM1-222ENST00000596378 PMAIP1Q13794 54 aa12.2□□□□□ -0.46
SRRM1-222ENST00000596378 ATP11AUNQ6ZP68 121 aa12.16□□□□□ -0.46
SRRM1-222ENST00000596378 KRTAP17-1Q9BYP8 105 aa12.14□□□□□ -0.47
SRRM1-222ENST00000596378 KRTAP10-8P60410 259 aa12.14□□□□□ -0.47
SRRM1-222ENST00000596378 KRTAP3-1Q9BYR8 98 aa12.09□□□□□ -0.47
SRRM1-222ENST00000596378 KIAA1109Q2LD37 5005 aa12.09□□□□□ -0.47
SRRM1-222ENST00000596378 DMBT1Q9UGM3 2413 aaPredicted RBP12.04□□□□□ -0.48
SRRM1-222ENST00000596378 MYCBP2O75592 4640 aa12.04□□□□□ -0.48
SRRM1-222ENST00000596378 A6NN06 94 aa12.01□□□□□ -0.49
SRRM1-222ENST00000596378 UQCR11O14957 56 aa11.93□□□□□ -0.5
SRRM1-222ENST00000596378 EPPK1P58107 5090 aaKnown RBP11.93□□□□□ -0.5
SRRM1-222ENST00000596378 SPATA8Q6RVD6 105 aa11.92□□□□□ -0.5
SRRM1-222ENST00000596378 MIR22HGQ0VDD5 57 aa11.91□□□□□ -0.5
SRRM1-222ENST00000596378 COX6B2Q6YFQ2 88 aa11.87□□□□□ -0.51
SRRM1-222ENST00000596378 XP32Q5T750 250 aa11.86□□□□□ -0.51
SRRM1-222ENST00000596378 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms